RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Kif27Q7M6Z4 1394 aa15.69■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Arhgap27A2AB59 869 aa15.68■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Iqcf3Q9D498 203 aa15.68■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Polr1aO35134 1717 aaKnown RBP15.68■□□□□ 0.1
Sdc1-201ENSMUST00000020911 CadpsQ80TJ1 1355 aa15.68■□□□□ 0.1
Sdc1-201ENSMUST00000020911 P3h3Q8CG70 732 aa15.67■□□□□ 0.1
Sdc1-201ENSMUST00000020911 NeflP08551 543 aa15.67■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Armcx1Q9CX83 456 aa15.67■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Grin2aP35436 1464 aa15.67■□□□□ 0.1
Sdc1-201ENSMUST00000020911 DmtnQ9WV69 405 aa15.66■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Ccnb3Q810T2 1396 aa15.65■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Kdm5bQ80Y84 1544 aa15.65■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Hspa5P20029 655 aaKnown RBP15.65■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Gm7298A0A0N4SVU1 1476 aa15.65■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Pdcl3Q8BVF2 240 aa15.65■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Magi3Q9EQJ9 1476 aa15.64■□□□□ 0.1
Sdc1-201ENSMUST00000020911 Gm1043A0A140LJC2 1431 aa15.64■□□□□ 0.09
Sdc1-201ENSMUST00000020911 Fkbp15Q6P9Q6 1216 aaKnown RBP15.62■□□□□ 0.09
Sdc1-201ENSMUST00000020911 Dnttip2Q8R2M2 758 aaKnown RBP15.62■□□□□ 0.09
Sdc1-201ENSMUST00000020911 Disp1Q3TDN0 1521 aa15.62■□□□□ 0.09
Sdc1-201ENSMUST00000020911 ChgaP26339 463 aaKnown RBP15.61■□□□□ 0.09
Sdc1-201ENSMUST00000020911 Gpatch8A2A6A1 1505 aa15.6■□□□□ 0.09
Sdc1-201ENSMUST00000020911 WizO88286 1684 aaKnown RBP15.6■□□□□ 0.09
Sdc1-201ENSMUST00000020911 WrnO09053 1401 aa15.59■□□□□ 0.09
Sdc1-201ENSMUST00000020911 CatipB9EKE5 520 aa15.59■□□□□ 0.09
Sdc1-201ENSMUST00000020911 Zbtb7cQ8VCZ7 619 aa15.58■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Rbm10Q99KG3 930 aaKnown RBP15.57■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Mia2Q91ZV0 1396 aa15.57■□□□□ 0.08
Sdc1-201ENSMUST00000020911 PxdnQ3UQ28 1475 aa15.57■□□□□ 0.08
Sdc1-201ENSMUST00000020911 TchhA0A0B4J1F9 1599 aa15.56■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Znf316Q6PGE4 1016 aa15.55■□□□□ 0.08
Sdc1-201ENSMUST00000020911 A2mQ6GQT1 1474 aa15.54■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Gtf2a1Q99PM3 378 aa15.53■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Peg3Q3URU2 1571 aa15.53■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Vgll3P85442 326 aa15.53■□□□□ 0.08
Sdc1-201ENSMUST00000020911 IbspQ61711 324 aa15.53■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Fhad1A6PWD2 1420 aa15.53■□□□□ 0.08
Sdc1-201ENSMUST00000020911 Cabp1Q9JLK7 227 aa15.52■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Naip2Q9QUK4 1447 aa15.51■□□□□ 0.07
Sdc1-201ENSMUST00000020911 NexmifQ5DTT1 1515 aa15.5■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Abca5Q8K448 1642 aa15.5■□□□□ 0.07
Sdc1-201ENSMUST00000020911 BC005561E9Q5E2 1589 aa15.5■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Sin3aQ60520 1274 aaKnown RBP15.49■□□□□ 0.07
Sdc1-201ENSMUST00000020911 TimelessQ9R1X4 1197 aa15.48■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Vps8Q0P5W1 1427 aa15.48■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Ift140E9PY46 1464 aa15.48■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Soga1E1U8D0 1418 aa15.47■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Zfp91Q62511 572 aa15.46■□□□□ 0.07
Sdc1-201ENSMUST00000020911 Adamts12Q811B3 1600 aa15.45■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Zfp644E9QA22 1323 aa15.45■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Kcnh8P59111 1102 aa15.45■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Setd1bQ8CFT2 1985 aa15.44■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Rrp9Q91WM3 475 aaKnown RBP15.42■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Ncoa3O09000 1398 aa15.42■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Nup160Q9Z0W3 1402 aaKnown RBP15.41■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Mphosph9A6H5Y1 991 aa15.41■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Abca16E9PWJ7 1678 aa15.41■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Mug1P28665 1476 aa15.4■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Lrriq1Q0P5X1 1673 aa15.4■□□□□ 0.06
Sdc1-201ENSMUST00000020911 Lmtk2Q3TYD6 1471 aa15.39■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Arhgap31A6X8Z5 1425 aa15.39■□□□□ 0.05
Sdc1-201ENSMUST00000020911 AU015836B2RUM3 263 aa15.38■□□□□ 0.05
Sdc1-201ENSMUST00000020911 AknaQ80VW7 1404 aa15.38■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Mtus2Q3UHD3 1353 aa15.38■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Ankrd36D3Z4K0 1415 aa15.38■□□□□ 0.05
Sdc1-201ENSMUST00000020911 UacaQ8CGB3 1411 aa15.37■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Tcerg1Q8CGF7 1100 aaKnown RBP15.36■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Plekhh2Q8C115 1491 aa15.35■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Cc2d2bA0A286YDU8 1405 aa15.35■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Shroom2A2ALU4 1481 aa15.34■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Abcc5Q9R1X5 1436 aa15.34■□□□□ 0.05
Sdc1-201ENSMUST00000020911 Pkd2O35245 966 aa15.33■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Arhgef40Q3UPH7 1517 aa15.33■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Dennd4bQ3U1Y4 1499 aa15.32■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Rapgef6Q5NCJ1 1609 aa15.32■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Abcc2Q8VI47 1543 aa15.3■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Tdrd9Q14BI7 1383 aa15.3■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Gcc2Q8CHG3 1679 aa15.29■□□□□ 0.04
Sdc1-201ENSMUST00000020911 CanxP35564 591 aaKnown RBP15.29■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Sart3Q9JLI8 962 aaKnown RBP15.29■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Gm13697A2AK42 830 aa15.29■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Neo1P97798 1493 aa15.29■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Ncoa2Q61026 1462 aa15.27■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Smg6P61406 1418 aaKnown RBP15.27■□□□□ 0.04
Sdc1-201ENSMUST00000020911 Jph4Q80WT0 628 aa15.27■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Kdm6bQ5NCY0 1641 aa15.26■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Rgl3Q3UYI5 709 aa15.26■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Pbrm1Q8BSQ9 1634 aaKnown RBP15.26■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Stard8Q8K031 1019 aa15.26■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Usp47Q8BY87 1376 aa15.25■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Mrs2Q5NCE8 434 aa15.25■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Mroh3A0A1D5RM54 893 aa15.25■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Ccdc141E9Q8Q6 1531 aa15.24■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Magi1Q6RHR9 1471 aa15.24■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Arhgef11Q68FM7 1552 aa15.23■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Trak1Q6PD31 939 aa15.23■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Prex2Q3LAC4 1598 aa15.23■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Adcy10Q8C0T9 1614 aa15.22■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Naip5Q9R016 1403 aa15.22■□□□□ 0.03
Sdc1-201ENSMUST00000020911 Adgrb2Q8CGM1 1561 aa15.21■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms