RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Nup155Q99P88 1391 aaKnown RBP17.22■□□□□ 0.35
Traf6-201ENSMUST00000004949 Senp3Q9EP97 568 aaKnown RBP17.21■□□□□ 0.35
Traf6-201ENSMUST00000004949 WrnO09053 1401 aa17.21■□□□□ 0.35
Traf6-201ENSMUST00000004949 Dbr1Q923B1 550 aa17.2■□□□□ 0.34
Traf6-201ENSMUST00000004949 Ythdc1E9Q5K9 736 aaKnown RBP17.19■□□□□ 0.34
Traf6-201ENSMUST00000004949 Ggt6Q6PDE7 497 aa17.19■□□□□ 0.34
Traf6-201ENSMUST00000004949 Pabpn1Q8CCS6 302 aaKnown RBP17.19■□□□□ 0.34
Traf6-201ENSMUST00000004949 DekQ7TNV0 380 aaKnown RBP17.19■□□□□ 0.34
Traf6-201ENSMUST00000004949 Birc3O08863 600 aa17.18■□□□□ 0.34
Traf6-201ENSMUST00000004949 Plekhh2Q8C115 1491 aa17.17■□□□□ 0.34
Traf6-201ENSMUST00000004949 Hsp90ab1P11499 724 aaKnown RBP17.16■□□□□ 0.34
Traf6-201ENSMUST00000004949 Dhx57Q6P5D3 1388 aaKnown RBP17.16■□□□□ 0.34
Traf6-201ENSMUST00000004949 Exoc6Q8R313 802 aa17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 Dcaf11Q91VU6 549 aa17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 Iqcf3Q9D498 203 aa17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 Fan1Q69ZT1 1020 aa17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 U2surpQ6NV83 1029 aaKnown RBP17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 Fhad1A6PWD2 1420 aa17.14■□□□□ 0.33
Traf6-201ENSMUST00000004949 Soga1E1U8D0 1418 aa17.11■□□□□ 0.33
Traf6-201ENSMUST00000004949 Tmf1B9EKI3 1091 aa17.1■□□□□ 0.33
Traf6-201ENSMUST00000004949 CanxP35564 591 aaKnown RBP17.1■□□□□ 0.33
Traf6-201ENSMUST00000004949 B4galnt3Q6L8S8 986 aa17.09■□□□□ 0.33
Traf6-201ENSMUST00000004949 Speer4f1Q9D5Q6 258 aa17.09■□□□□ 0.33
Traf6-201ENSMUST00000004949 U2af1Q9D883 239 aaKnown RBP17.08■□□□□ 0.33
Traf6-201ENSMUST00000004949 Srcin1Q9QWI6 1250 aa17.08■□□□□ 0.33
Traf6-201ENSMUST00000004949 Slc4a3P16283 1227 aa17.08■□□□□ 0.32
Traf6-201ENSMUST00000004949 Rock2P70336 1388 aa17.07■□□□□ 0.32
Traf6-201ENSMUST00000004949 Rad54l2Q99NG0 1466 aa17.07■□□□□ 0.32
Traf6-201ENSMUST00000004949 Tnnt1O88346 262 aa17.07■□□□□ 0.32
Traf6-201ENSMUST00000004949 Jph4Q80WT0 628 aa17.07■□□□□ 0.32
Traf6-201ENSMUST00000004949 Clstn1Q9EPL2 979 aa17.07■□□□□ 0.32
Traf6-201ENSMUST00000004949 Q8BT18 775 aa17.05■□□□□ 0.32
Traf6-201ENSMUST00000004949 SafbD3YXK2 937 aaKnown RBP17.05■□□□□ 0.32
Traf6-201ENSMUST00000004949 Cc2d2aQ8CFW7 1633 aa17.05■□□□□ 0.32
Traf6-201ENSMUST00000004949 Utp14aQ640M1 767 aaKnown RBP17.04■□□□□ 0.32
Traf6-201ENSMUST00000004949 Tdrd9Q14BI7 1383 aa17.04■□□□□ 0.32
Traf6-201ENSMUST00000004949 NudcO35685 332 aaKnown RBP17.04■□□□□ 0.32
Traf6-201ENSMUST00000004949 Rtf1A2AQ19 715 aaKnown RBP17.04■□□□□ 0.32
Traf6-201ENSMUST00000004949 Slc4a1apE9PX68 744 aa17.03■□□□□ 0.32
Traf6-201ENSMUST00000004949 Hsp90aa1P07901 733 aaKnown RBP17.03■□□□□ 0.32
Traf6-201ENSMUST00000004949 Cc2d2bA0A286YDU8 1405 aa17.02■□□□□ 0.32
Traf6-201ENSMUST00000004949 Urb2E9Q7L1 1524 aaKnown RBP17.01■□□□□ 0.31
Traf6-201ENSMUST00000004949 Tmco5bQ80X59 307 aa17■□□□□ 0.31
Traf6-201ENSMUST00000004949 Spag9Q58A65 1321 aaKnown RBP17■□□□□ 0.31
Traf6-201ENSMUST00000004949 Pibf1E9Q6K3 756 aa16.98■□□□□ 0.31
Traf6-201ENSMUST00000004949 Znf330Q922H9 316 aa16.98■□□□□ 0.31
Traf6-201ENSMUST00000004949 Shroom4Q1W617 1475 aa16.98■□□□□ 0.31
Traf6-201ENSMUST00000004949 Usp47Q8BY87 1376 aa16.97■□□□□ 0.31
Traf6-201ENSMUST00000004949 Rwdd1Q9CQK7 243 aa16.97■□□□□ 0.31
Traf6-201ENSMUST00000004949 Shq1Q7TMX5 569 aa16.96■□□□□ 0.31
Traf6-201ENSMUST00000004949 Zscan21Q07231 555 aa16.96■□□□□ 0.31
Traf6-201ENSMUST00000004949 CrbnQ8C7D2 445 aa16.96■□□□□ 0.31
Traf6-201ENSMUST00000004949 Golga2Q921M4 999 aa16.95■□□□□ 0.3
Traf6-201ENSMUST00000004949 Znf326O88291 580 aa16.95■□□□□ 0.3
Traf6-201ENSMUST00000004949 Fam71e1A1L3C1 212 aa16.95■□□□□ 0.3
Traf6-201ENSMUST00000004949 Ubap1lG3UW59 384 aa16.94■□□□□ 0.3
Traf6-201ENSMUST00000004949 Zfp777B9EKF4 885 aa16.93■□□□□ 0.3
Traf6-201ENSMUST00000004949 Q3TQI7 289 aaKnown RBP16.92■□□□□ 0.3
Traf6-201ENSMUST00000004949 Hsp90b1P08113 802 aaKnown RBP16.91■□□□□ 0.3
Traf6-201ENSMUST00000004949 1700123L14RikQ3V2K7 440 aa16.91■□□□□ 0.3
Traf6-201ENSMUST00000004949 Pank3Q8R2W9 370 aa16.91■□□□□ 0.3
Traf6-201ENSMUST00000004949 Mink1Q9JM52 1308 aa16.91■□□□□ 0.3
Traf6-201ENSMUST00000004949 UacaQ8CGB3 1411 aa16.91■□□□□ 0.3
Traf6-201ENSMUST00000004949 Usp40Q8BWR4 1235 aa16.9■□□□□ 0.3
Traf6-201ENSMUST00000004949 Zfp644E9QA22 1323 aa16.89■□□□□ 0.29
Traf6-201ENSMUST00000004949 Duox2A2AQ99 1517 aa16.89■□□□□ 0.29
Traf6-201ENSMUST00000004949 Ap3b2Q9JME5 1082 aa16.89■□□□□ 0.29
Traf6-201ENSMUST00000004949 Mak16Q8BGS0 296 aaKnown RBP16.88■□□□□ 0.29
Traf6-201ENSMUST00000004949 Cluap1Q8R3P7 413 aa16.88■□□□□ 0.29
Traf6-201ENSMUST00000004949 CenpjQ569L8 1344 aa16.88■□□□□ 0.29
Traf6-201ENSMUST00000004949 Efcab5A0JP43 1406 aa16.87■□□□□ 0.29
Traf6-201ENSMUST00000004949 Tcerg1Q8CGF7 1100 aaKnown RBP16.87■□□□□ 0.29
Traf6-201ENSMUST00000004949 Inpp5dQ9ES52 1191 aa16.87■□□□□ 0.29
Traf6-201ENSMUST00000004949 Plcb2A3KGF7 1181 aa16.86■□□□□ 0.29
Traf6-201ENSMUST00000004949 Cabp4Q8VHC5 271 aa16.85■□□□□ 0.29
Traf6-201ENSMUST00000004949 Ncoa2Q61026 1462 aa16.85■□□□□ 0.29
Traf6-201ENSMUST00000004949 Pak3Q61036 559 aa16.85■□□□□ 0.29
Traf6-201ENSMUST00000004949 Pes1Q9EQ61 584 aaKnown RBP16.85■□□□□ 0.29
Traf6-201ENSMUST00000004949 Chmp4bQ9D8B3 224 aaKnown RBP16.85■□□□□ 0.29
Traf6-201ENSMUST00000004949 Ksr2Q3UVC0 959 aa16.84■□□□□ 0.29
Traf6-201ENSMUST00000004949 Map7O88735 730 aa16.83■□□□□ 0.29
Traf6-201ENSMUST00000004949 Rsph4aQ8BYM7 716 aa16.83■□□□□ 0.29
Traf6-201ENSMUST00000004949 Pip4k2bQ80XI4 416 aa16.83■□□□□ 0.29
Traf6-201ENSMUST00000004949 HdgfP51859 237 aaKnown RBP16.82■□□□□ 0.28
Traf6-201ENSMUST00000004949 Tsen2Q6P7W5 460 aa16.81■□□□□ 0.28
Traf6-201ENSMUST00000004949 Sh3bp5Q9Z131 463 aa16.81■□□□□ 0.28
Traf6-201ENSMUST00000004949 Map3k5O35099 1380 aa16.81■□□□□ 0.28
Traf6-201ENSMUST00000004949 Frmpd1A2AKB4 1549 aa16.8■□□□□ 0.28
Traf6-201ENSMUST00000004949 Spryd3E9Q9B3 442 aa16.79■□□□□ 0.28
Traf6-201ENSMUST00000004949 Supt16hQ920B9 1047 aa16.79■□□□□ 0.28
Traf6-201ENSMUST00000004949 Top2aQ01320 1528 aaKnown RBP16.78■□□□□ 0.28
Traf6-201ENSMUST00000004949 Arhgap31A6X8Z5 1425 aa16.78■□□□□ 0.28
Traf6-201ENSMUST00000004949 Mrc2Q64449 1479 aa16.77■□□□□ 0.28
Traf6-201ENSMUST00000004949 Chmp5Q9D7S9 219 aa16.77■□□□□ 0.27
Traf6-201ENSMUST00000004949 PtmaP26350 111 aa16.76■□□□□ 0.27
Traf6-201ENSMUST00000004949 Pde4cQ3UEI1 686 aa16.76■□□□□ 0.27
Traf6-201ENSMUST00000004949 Bcl11bQ99PV8 884 aa16.76■□□□□ 0.27
Traf6-201ENSMUST00000004949 Rassf8Q8CJ96 419 aa16.76■□□□□ 0.27
Traf6-201ENSMUST00000004949 ErbinQ80TH2 1402 aa16.75■□□□□ 0.27
Traf6-201ENSMUST00000004949 Stard8Q8K031 1019 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms