RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Znf771Q8BJ90 317 aa15.85■□□□□ 0.13
Ncan-201ENSMUST00000002412 R3hcc1Q8BSI6 488 aa15.85■□□□□ 0.13
Ncan-201ENSMUST00000002412 Cep164Q5DU05 1446 aa15.85■□□□□ 0.13
Ncan-201ENSMUST00000002412 Senp3Q9EP97 568 aaKnown RBP15.85■□□□□ 0.13
Ncan-201ENSMUST00000002412 KnstrnQ9D9Z1 312 aaKnown RBP15.84■□□□□ 0.13
Ncan-201ENSMUST00000002412 Plin1Q8CGN5 517 aa15.83■□□□□ 0.13
Ncan-201ENSMUST00000002412 Mfap1aC0HKD8 439 aaKnown RBP15.83■□□□□ 0.13
Ncan-201ENSMUST00000002412 Mfap1bC0HKD9 439 aaKnown RBP15.83■□□□□ 0.13
Ncan-201ENSMUST00000002412 VgfQ0VGU4 617 aa15.83■□□□□ 0.13
Ncan-201ENSMUST00000002412 Znf526Q8BI66 675 aa15.83■□□□□ 0.12
Ncan-201ENSMUST00000002412 Exosc9Q9JHI7 438 aaKnown RBP15.83■□□□□ 0.12
Ncan-201ENSMUST00000002412 Tpm3-rs7D3Z2H9 248 aa15.82■□□□□ 0.12
Ncan-201ENSMUST00000002412 Tpm3P21107 285 aaKnown RBP15.82■□□□□ 0.12
Ncan-201ENSMUST00000002412 GorabQ8BRM2 368 aa15.81■□□□□ 0.12
Ncan-201ENSMUST00000002412 Cnga1P29974 684 aa15.8■□□□□ 0.12
Ncan-201ENSMUST00000002412 ChgaP26339 463 aaKnown RBP15.8■□□□□ 0.12
Ncan-201ENSMUST00000002412 Ipo9Q91YE6 1041 aa15.79■□□□□ 0.12
Ncan-201ENSMUST00000002412 A0A0U1RNP2 1173 aa15.78■□□□□ 0.12
Ncan-201ENSMUST00000002412 Cluap1Q8R3P7 413 aa15.78■□□□□ 0.12
Ncan-201ENSMUST00000002412 Vps53Q8CCB4 832 aa15.77■□□□□ 0.11
Ncan-201ENSMUST00000002412 U2surpQ6NV83 1029 aaKnown RBP15.77■□□□□ 0.11
Ncan-201ENSMUST00000002412 Q8BT18 775 aa15.76■□□□□ 0.11
Ncan-201ENSMUST00000002412 IqubQ8CDK3 788 aa15.75■□□□□ 0.11
Ncan-201ENSMUST00000002412 Ddrgk1Q80WW9 315 aa15.74■□□□□ 0.11
Ncan-201ENSMUST00000002412 Znf330Q922H9 316 aa15.74■□□□□ 0.11
Ncan-201ENSMUST00000002412 CalrP14211 416 aaKnown RBP15.74■□□□□ 0.11
Ncan-201ENSMUST00000002412 Hdgfl1Q2VPR5 283 aa15.73■□□□□ 0.11
Ncan-201ENSMUST00000002412 Chmp5Q9D7S9 219 aa15.72■□□□□ 0.11
Ncan-201ENSMUST00000002412 Abcc9P70170 1546 aa15.72■□□□□ 0.11
Ncan-201ENSMUST00000002412 Pnmal2G3X9N3 661 aa15.71■□□□□ 0.11
Ncan-201ENSMUST00000002412 Tnnt1O88346 262 aa15.71■□□□□ 0.11
Ncan-201ENSMUST00000002412 Card11Q8CIS0 1159 aa15.71■□□□□ 0.11
Ncan-201ENSMUST00000002412 Rwdd1Q9CQK7 243 aa15.71■□□□□ 0.1
Ncan-201ENSMUST00000002412 MecomP14404 1042 aa15.71■□□□□ 0.1
Ncan-201ENSMUST00000002412 Fnbp4Q6ZQ03 1031 aa15.7■□□□□ 0.1
Ncan-201ENSMUST00000002412 Tcerg1Q8CGF7 1100 aaKnown RBP15.69■□□□□ 0.1
Ncan-201ENSMUST00000002412 Srpk2O54781 681 aaKnown RBP15.69■□□□□ 0.1
Ncan-201ENSMUST00000002412 Plcd4Q8K3R3 807 aa15.69■□□□□ 0.1
Ncan-201ENSMUST00000002412 4933402E13RikQ9D4D2 429 aa15.69■□□□□ 0.1
Ncan-201ENSMUST00000002412 Chmp4bQ9D8B3 224 aaKnown RBP15.69■□□□□ 0.1
Ncan-201ENSMUST00000002412 Gm20521D3Z5F7 333 aa15.68■□□□□ 0.1
Ncan-201ENSMUST00000002412 Tpd52l1O54818 204 aa15.68■□□□□ 0.1
Ncan-201ENSMUST00000002412 Wdr78E9PYY5 807 aa15.67■□□□□ 0.1
Ncan-201ENSMUST00000002412 Ush1cQ9ES64 910 aa15.67■□□□□ 0.1
Ncan-201ENSMUST00000002412 Polr3gQ6NXY9 223 aa15.67■□□□□ 0.1
Ncan-201ENSMUST00000002412 EspnQ9ET47 871 aa15.67■□□□□ 0.1
Ncan-201ENSMUST00000002412 Ipo8Q7TMY7 1010 aa15.67■□□□□ 0.1
Ncan-201ENSMUST00000002412 BlmO88700 1416 aa15.66■□□□□ 0.1
Ncan-201ENSMUST00000002412 Tmco5bQ80X59 307 aa15.66■□□□□ 0.1
Ncan-201ENSMUST00000002412 Ccar1Q8CH18 1146 aaKnown RBP15.66■□□□□ 0.1
Ncan-201ENSMUST00000002412 NudcO35685 332 aaKnown RBP15.66■□□□□ 0.1
Ncan-201ENSMUST00000002412 Ccer1Q9CQL2 403 aa15.66■□□□□ 0.1
Ncan-201ENSMUST00000002412 Taf3Q5HZG4 932 aa15.64■□□□□ 0.1
Ncan-201ENSMUST00000002412 PtmsQ9D0J8 101 aaKnown RBP15.64■□□□□ 0.1
Ncan-201ENSMUST00000002412 Fam13bQ8K2H3 851 aa15.64■□□□□ 0.09
Ncan-201ENSMUST00000002412 Sf3a1Q8K4Z5 791 aaKnown RBP15.64■□□□□ 0.09
Ncan-201ENSMUST00000002412 Brpf1B2RRD7 1212 aa15.63■□□□□ 0.09
Ncan-201ENSMUST00000002412 Stag3O70576 1240 aa15.63■□□□□ 0.09
Ncan-201ENSMUST00000002412 Znf704Q9ERQ3 566 aa15.63■□□□□ 0.09
Ncan-201ENSMUST00000002412 Ccdc34Q3UI66 367 aa15.62■□□□□ 0.09
Ncan-201ENSMUST00000002412 Utp3Q9JI13 469 aaKnown RBP15.62■□□□□ 0.09
Ncan-201ENSMUST00000002412 Speer4f1Q9D5Q6 258 aa15.61■□□□□ 0.09
Ncan-201ENSMUST00000002412 Dusp9Q7TNL7 452 aa15.61■□□□□ 0.09
Ncan-201ENSMUST00000002412 Iqcf3Q9D498 203 aa15.61■□□□□ 0.09
Ncan-201ENSMUST00000002412 TimelessQ9R1X4 1197 aa15.61■□□□□ 0.09
Ncan-201ENSMUST00000002412 Gabpb2P81069 414 aa15.6■□□□□ 0.09
Ncan-201ENSMUST00000002412 HnrnpuQ8VEK3 800 aaKnown RBP15.6■□□□□ 0.09
Ncan-201ENSMUST00000002412 Mroh3A0A1D5RM54 893 aa15.6■□□□□ 0.09
Ncan-201ENSMUST00000002412 Clstn2Q9ER65 966 aa15.59■□□□□ 0.09
Ncan-201ENSMUST00000002412 Paf1Q8K2T8 535 aa15.59■□□□□ 0.09
Ncan-201ENSMUST00000002412 Kri1Q8VDQ9 704 aaKnown RBP15.59■□□□□ 0.09
Ncan-201ENSMUST00000002412 Stk24Q99KH8 431 aa15.59■□□□□ 0.09
Ncan-201ENSMUST00000002412 Cspp1B2RX88 1205 aa15.59■□□□□ 0.09
Ncan-201ENSMUST00000002412 Rufy1Q8BIJ7 712 aa15.57■□□□□ 0.08
Ncan-201ENSMUST00000002412 AcrbpQ3V140 540 aa15.56■□□□□ 0.08
Ncan-201ENSMUST00000002412 Zrsr2Q62377 462 aaKnown RBP15.56■□□□□ 0.08
Ncan-201ENSMUST00000002412 Dixdc1Q80Y83 711 aa15.56■□□□□ 0.08
Ncan-201ENSMUST00000002412 Rbm10Q99KG3 930 aaKnown RBP15.55■□□□□ 0.08
Ncan-201ENSMUST00000002412 Chmp4cQ9D7F7 232 aa15.55■□□□□ 0.08
Ncan-201ENSMUST00000002412 Chmp3Q9CQ10 224 aa15.55■□□□□ 0.08
Ncan-201ENSMUST00000002412 Tpm4Q6IRU2 248 aa15.54■□□□□ 0.08
Ncan-201ENSMUST00000002412 Nolc1E9Q5C9 702 aaKnown RBP15.54■□□□□ 0.08
Ncan-201ENSMUST00000002412 Ripply1Q2WG77 201 aa15.53■□□□□ 0.08
Ncan-201ENSMUST00000002412 Rtf1A2AQ19 715 aaKnown RBP15.53■□□□□ 0.08
Ncan-201ENSMUST00000002412 Sart3Q9JLI8 962 aaKnown RBP15.53■□□□□ 0.08
Ncan-201ENSMUST00000002412 Anp32eP97822 260 aaKnown RBP15.53■□□□□ 0.08
Ncan-201ENSMUST00000002412 Mbd3Q9Z2D8 285 aaKnown RBP15.53■□□□□ 0.08
Ncan-201ENSMUST00000002412 Nol10Q5RJG1 687 aaKnown RBP15.52■□□□□ 0.08
Ncan-201ENSMUST00000002412 Tpm1P58771 284 aa15.51■□□□□ 0.07
Ncan-201ENSMUST00000002412 Krt82Q99M74 516 aa15.51■□□□□ 0.07
Ncan-201ENSMUST00000002412 Smarce1O54941 411 aaKnown RBP15.51■□□□□ 0.07
Ncan-201ENSMUST00000002412 Dnai2A2AC93 623 aa15.51■□□□□ 0.07
Ncan-201ENSMUST00000002412 FosbP13346 338 aa15.5■□□□□ 0.07
Ncan-201ENSMUST00000002412 Pibf1E9Q6K3 756 aa15.5■□□□□ 0.07
Ncan-201ENSMUST00000002412 Tpm2P58774 284 aa15.5■□□□□ 0.07
Ncan-201ENSMUST00000002412 MyclP10166 368 aa15.5■□□□□ 0.07
Ncan-201ENSMUST00000002412 Znhit6Q3UFB2 460 aaKnown RBP15.5■□□□□ 0.07
Ncan-201ENSMUST00000002412 Rfx1P48377 963 aa15.48■□□□□ 0.07
Ncan-201ENSMUST00000002412 Ccdc43Q9CR29 222 aaKnown RBP15.48■□□□□ 0.07
Ncan-201ENSMUST00000002412 Ralbp1Q62172 648 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms