RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLS1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLS1	YLR408C	JJJ1	P53863	590 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	RPT6	Q01939	405 aa	Known RBP	4.59	□□□□□ -1.67
BLS1	YLR408C	YDR415C	Q04033	374 aa	Predicted RBP	4.59	□□□□□ -1.67
BLS1	YLR408C	RBA50	Q04418	439 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	GLO2	Q05584	274 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	HCR1	Q05775	265 aa	Known RBP	4.59	□□□□□ -1.67
BLS1	YLR408C	YDL057W	Q07379	328 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	FMP45	Q07651	309 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	NRT1	Q08485	598 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	SEC39	Q12745	709 aa		4.59	□□□□□ -1.67
BLS1	YLR408C	RAD52	P06778	471 aa	Known RBP	4.58	□□□□□ -1.68
BLS1	YLR408C	GCS1	P35197	352 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	DUG2	P38149	878 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	CST26	P38226	397 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	YAT2	P40017	923 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	YJL070C	P40361	888 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	TWF1	P53250	332 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	YMR087W	Q04299	284 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	BNA5	Q05979	453 aa		4.58	□□□□□ -1.68
BLS1	YLR408C	MRS3	P10566	314 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	AMD1	P15274	810 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	CKA1	P15790	372 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	SEC66	P33754	206 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	TCM62	P38228	572 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	VID24	P38263	362 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	RRP3	P38712	501 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	TIF4631	P39935	952 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	STB2	P46679	850 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	HEF3	P53978	1044 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	YMR317W	Q04893	1140 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	MRD1	Q06106	887 aa	Known RBP	4.57	□□□□□ -1.68
BLS1	YLR408C	THP1	Q08231	455 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	GRX6	Q12438	231 aa		4.57	□□□□□ -1.68
BLS1	YLR408C	APE1	P14904	514 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	YCR007C	P25354	239 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	PAP1	P29468	568 aa	Known RBP	4.56	□□□□□ -1.68
BLS1	YLR408C	OSH3	P38713	996 aa	Known RBP	4.56	□□□□□ -1.68
BLS1	YLR408C	YJL068C	P40363	299 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	YGL082W	P53155	381 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	MRPL19	P53875	158 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	SLG1	P54867	378 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	MDM1	Q01846	1127 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	TAF11	Q04226	346 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	DAP1	Q12091	152 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	YDL007C-A	Q2V2Q0	85 aa		4.56	□□□□□ -1.68
BLS1	YLR408C	SEC62	P21825	274 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	ROX1	P25042	368 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	UTR4	P32626	227 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	YME1	P32795	747 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	MSN2	P33748	704 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	BNA4	P38169	460 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	DOT5	P40553	215 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	SCS3	P53012	380 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	SLD5	Q03406	294 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	YDR239C	Q03780	787 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	SYO1	Q07395	620 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	ATG29	Q12092	213 aa		4.55	□□□□□ -1.68
BLS1	YLR408C	MET17	P06106	444 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	RPL31B	P0C2H9	113 aa	Known RBP	4.54	□□□□□ -1.68
BLS1	YLR408C	NPL6	P32832	435 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	SIP2	P34164	415 aa	Known RBP	4.54	□□□□□ -1.68
BLS1	YLR408C	CMC1	P36064	111 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	MBB1	P39534	108 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
BLS1	YLR408C	SRB7	P47822	140 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	TAP42	Q04372	366 aa		4.54	□□□□□ -1.68
BLS1	YLR408C	BRR1	Q99177	341 aa	Predicted RBP	4.54	□□□□□ -1.68
BLS1	YLR408C	INH1	P01097	85 aa		4.53	□□□□□ -1.68
BLS1	YLR408C	COR1	P07256	457 aa		4.53	□□□□□ -1.68
BLS1	YLR408C	LOS1	P33418	1100 aa	Predicted RBP	4.53	□□□□□ -1.68
BLS1	YLR408C	YNK1	P36010	153 aa	Known RBP	4.53	□□□□□ -1.68
BLS1	YLR408C	IKS1	P47042	667 aa		4.53	□□□□□ -1.68
BLS1	YLR408C	RQC1	Q05468	723 aa	Known RBP	4.53	□□□□□ -1.68
BLS1	YLR408C	RIM20	Q12033	661 aa		4.53	□□□□□ -1.68
BLS1	YLR408C	YML002W	P0CF17	737 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	PMT1	P33775	817 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	SMF1	P38925	575 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	VPS52	P39904	641 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	ZPR1	P53303	486 aa	Known RBP	4.52	□□□□□ -1.69
BLS1	YLR408C	PDS5	Q04264	1277 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	ERP1	Q05359	219 aa	Known RBP	4.52	□□□□□ -1.69
BLS1	YLR408C	KEL3	Q08979	651 aa	Predicted RBP	4.52	□□□□□ -1.69
BLS1	YLR408C	YDL009C	Q12210	107 aa		4.52	□□□□□ -1.69
BLS1	YLR408C	PGA3	Q12746	312 aa	Known RBP	4.52	□□□□□ -1.69
BLS1	YLR408C	GPI10	P30777	616 aa		4.51	□□□□□ -1.69
BLS1	YLR408C	ERG3	P32353	365 aa		4.51	□□□□□ -1.69
BLS1	YLR408C	DHH1	P39517	506 aa	Known RBP	4.51	□□□□□ -1.69
BLS1	YLR408C	YMR147W	P40218	223 aa	Known RBP	4.51	□□□□□ -1.69
BLS1	YLR408C	IVY1	Q04934	453 aa		4.51	□□□□□ -1.69
BLS1	YLR408C	RBS1	Q05672	457 aa	Known RBP	4.51	□□□□□ -1.69
BLS1	YLR408C	RPL15A	P05748	204 aa	Known RBP	4.5	□□□□□ -1.69
BLS1	YLR408C	GLK1	P17709	500 aa	Known RBP	4.5	□□□□□ -1.69
BLS1	YLR408C	KEL1	P38853	1164 aa	Known RBP	4.5	□□□□□ -1.69
BLS1	YLR408C	HXT14	P42833	540 aa		4.5	□□□□□ -1.69
BLS1	YLR408C	YGL260W	P53056	76 aa		4.5	□□□□□ -1.69
BLS1	YLR408C	CAF130	P53280	1122 aa	Predicted RBP	4.5	□□□□□ -1.69
BLS1	YLR408C	CRZ1	P53968	678 aa		4.5	□□□□□ -1.69
BLS1	YLR408C	MRPL51	Q06090	140 aa	Predicted RBP	4.5	□□□□□ -1.69
BLS1	YLR408C	PHO92	Q06390	306 aa		4.5	□□□□□ -1.69
BLS1	YLR408C	LSP1	Q12230	341 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms