RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W FOB1O13329 566 aa2.27□□□□□ -2.05
VPS52YDR484W GAL80P04387 435 aa2.27□□□□□ -2.05
VPS52YDR484W MRS3P10566 314 aa2.27□□□□□ -2.05
VPS52YDR484W HSC82P15108 705 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W EXO70P19658 623 aa2.27□□□□□ -2.05
VPS52YDR484W PTR2P32901 601 aa2.27□□□□□ -2.05
VPS52YDR484W SIP2P34164 415 aaKnown RBP2.27□□□□□ -2.05
VPS52YDR484W RTT101P47050 842 aa2.27□□□□□ -2.05
VPS52YDR484W YMR087WQ04299 284 aa2.27□□□□□ -2.05
VPS52YDR484W IVY1Q04934 453 aa2.27□□□□□ -2.05
VPS52YDR484W RTT103Q05543 409 aa2.27□□□□□ -2.05
VPS52YDR484W COQ9Q05779 260 aa2.27□□□□□ -2.05
VPS52YDR484W RAD52P06778 471 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W MRP7P12687 371 aa2.26□□□□□ -2.05
VPS52YDR484W MET8P15807 274 aa2.26□□□□□ -2.05
VPS52YDR484W YCR007CP25354 239 aa2.26□□□□□ -2.05
VPS52YDR484W PRD1P25375 712 aa2.26□□□□□ -2.05
VPS52YDR484W NDC1P32500 655 aa2.26□□□□□ -2.05
VPS52YDR484W UTR4P32626 227 aa2.26□□□□□ -2.05
VPS52YDR484W WBP1P33767 430 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W BNA4P38169 460 aa2.26□□□□□ -2.05
VPS52YDR484W MUM2P38236 366 aa2.26□□□□□ -2.05
VPS52YDR484W DHH1P39517 506 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W SGN1P40561 250 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
VPS52YDR484W MET28P40573 187 aa2.26□□□□□ -2.05
VPS52YDR484W ARF3P40994 183 aaRIP-Chip data2.26□□□□□ -2.05not detected
VPS52YDR484W SCD6P45978 349 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
VPS52YDR484W ARE2P53629 642 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W SLD5Q03406 294 aa2.26□□□□□ -2.05
VPS52YDR484W ERP1Q05359 219 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W BNA5Q05979 453 aa2.26□□□□□ -2.05
VPS52YDR484W YTH1Q06102 208 aaPredicted RBP2.26□□□□□ -2.05
VPS52YDR484W YDL009CQ12210 107 aa2.26□□□□□ -2.05
VPS52YDR484W LSP1Q12230 341 aaKnown RBP2.26□□□□□ -2.05
VPS52YDR484W YMR230W-AQ3E7B5 62 aa2.26□□□□□ -2.05
VPS52YDR484W PRP2P20095 876 aaPredicted RBP2.25□□□□□ -2.05
VPS52YDR484W SGV1P23293 657 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W MRE11P32829 692 aa2.25□□□□□ -2.05
VPS52YDR484W DUG2P38149 878 aa2.25□□□□□ -2.05
VPS52YDR484W SRO77P38163 1010 aa2.25□□□□□ -2.05
VPS52YDR484W TCM62P38228 572 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W VPS52P39904 641 aa2.25□□□□□ -2.05
VPS52YDR484W NPR2P39923 615 aa2.25□□□□□ -2.05
VPS52YDR484W TIF4631P39935 952 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W MFB1Q04922 465 aa2.25□□□□□ -2.05
VPS52YDR484W MRPL51Q06090 140 aaPredicted RBP2.25□□□□□ -2.05
VPS52YDR484W VPS74Q06385 345 aa2.25□□□□□ -2.05
VPS52YDR484W SYO1Q07395 620 aa2.25□□□□□ -2.05
VPS52YDR484W YBR298C-AQ8TGK4 73 aa2.25□□□□□ -2.05
VPS52YDR484W SUC2P00724 532 aa2.25□□□□□ -2.05
VPS52YDR484W RPL15AP05748 204 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W AMD1P15274 810 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W BUD14P27637 709 aa2.25□□□□□ -2.05
VPS52YDR484W SPC110P32380 944 aa2.25□□□□□ -2.05
VPS52YDR484W CST26P38226 397 aa2.25□□□□□ -2.05
VPS52YDR484W UTP9P38882 575 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W RPH1P39956 796 aa2.25□□□□□ -2.05
VPS52YDR484W DOT5P40553 215 aa2.25□□□□□ -2.05
VPS52YDR484W AIM22P47051 409 aa2.25□□□□□ -2.05
VPS52YDR484W PET130P47065 347 aa2.25□□□□□ -2.05
VPS52YDR484W TWF1P53250 332 aa2.25□□□□□ -2.05
VPS52YDR484W DRN1P53255 507 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W ZPR1P53303 486 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W GPI1P53306 609 aa2.25□□□□□ -2.05
VPS52YDR484W HEF3P53978 1044 aaKnown RBP2.25□□□□□ -2.05
VPS52YDR484W IRC15Q02733 499 aa2.25□□□□□ -2.05
VPS52YDR484W YDR239CQ03780 787 aa2.25□□□□□ -2.05
VPS52YDR484W SET6Q12529 373 aa2.25□□□□□ -2.05
VPS52YDR484W SEC39Q12745 709 aa2.25□□□□□ -2.05
VPS52YDR484W RAV1P47104 1357 aa2.24□□□□□ -2.05
VPS52YDR484W COR1P07256 457 aa2.24□□□□□ -2.05
VPS52YDR484W ELO2P25358 347 aa2.24□□□□□ -2.05
VPS52YDR484W MSN2P33748 704 aa2.24□□□□□ -2.05
VPS52YDR484W YBP1P38315 674 aa2.24□□□□□ -2.05
VPS52YDR484W ERP2P39704 215 aa2.24□□□□□ -2.05
VPS52YDR484W SPO22P40511 975 aa2.24□□□□□ -2.05
VPS52YDR484W YJL213WP40896 331 aa2.24□□□□□ -2.05
VPS52YDR484W ELP2P42935 788 aa2.24□□□□□ -2.05
VPS52YDR484W ROK1P45818 564 aaPredicted RBP2.24□□□□□ -2.05
VPS52YDR484W URB2P47108 1174 aa2.24□□□□□ -2.05
VPS52YDR484W YDL186WP48568 277 aa2.24□□□□□ -2.05
VPS52YDR484W RLI1Q03195 608 aaKnown RBP2.24□□□□□ -2.05
VPS52YDR484W RPC11Q04307 110 aaPredicted RBP2.24□□□□□ -2.05
VPS52YDR484W RBS1Q05672 457 aaKnown RBP2.24□□□□□ -2.05
VPS52YDR484W PHO92Q06390 306 aa2.24□□□□□ -2.05
VPS52YDR484W TSR2Q06672 205 aaKnown RBP2.24□□□□□ -2.05
VPS52YDR484W YDL007C-AQ2V2Q0 85 aa2.24□□□□□ -2.05
VPS52YDR484W RPL20AP0CX23 172 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W RPL20BP0CX24 172 aaPredicted RBP2.23□□□□□ -2.05
VPS52YDR484W GLK1P17709 500 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W RPN12P32496 274 aa2.23□□□□□ -2.05
VPS52YDR484W FRE1P32791 686 aa2.23□□□□□ -2.05
VPS52YDR484W VID24P38263 362 aa2.23□□□□□ -2.05
VPS52YDR484W MTC4P38335 694 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W MBB1P39534 108 aa2.23□□□□□ -2.05
VPS52YDR484W YEL057CP39983 233 aa2.23□□□□□ -2.05
VPS52YDR484W YFR016CP43597 1233 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W CAF130P53280 1122 aaPredicted RBP2.23□□□□□ -2.05
VPS52YDR484W TIM10P87108 93 aa2.23□□□□□ -2.05
VPS52YDR484W VPS72Q03388 795 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms