RNA–Protein interactions for RNA: YBL089W

AVT5, Transcript of Putative transporter, yeast

Gene AVT5, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT5	YBL089W	ICS2	P38284	255 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	DBP8	P38719	431 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	ARN1	P38731	627 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	VPS41	P38959	992 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	YJL107C	P42947	387 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	CAK1	P43568	368 aa	Predicted RBP	3.14	□□□□□ -1.91
AVT5	YBL089W	SMC3	P47037	1230 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	YGR127W	P53275	312 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	RSM23	Q01163	450 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	KAP120	Q02932	1032 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	YMR178W	Q03219	274 aa	Known RBP	3.14	□□□□□ -1.91
AVT5	YBL089W	PRP42	Q03776	544 aa	Known RBP	3.14	□□□□□ -1.91
AVT5	YBL089W	EMI2	Q04409	500 aa	Known RBP	3.14	□□□□□ -1.91
AVT5	YBL089W	PIG1	Q06216	648 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	VTA1	Q06263	330 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	GRS2	Q06817	618 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	CUE5	Q08412	411 aa	Known RBP	3.14	□□□□□ -1.91
AVT5	YBL089W	NDD1	Q08887	554 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	APL4	Q12028	832 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	FRE6	Q12473	712 aa		3.14	□□□□□ -1.91
AVT5	YBL089W	CLC1	P17891	233 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	SPE2	P21182	396 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	PPH22	P23595	377 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	BOS1	P25385	244 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	RML2	P32611	393 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	MTR2	P34232	184 aa	Known RBP	3.13	□□□□□ -1.91
AVT5	YBL089W	THI2	P38141	450 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	MSR1	P38714	643 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	PES4	P39684	611 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	YIL060W	P40519	144 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	AIM22	P47051	409 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	YPT11	P48559	417 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	MNP1	P53163	194 aa	Predicted RBP	3.13	□□□□□ -1.91
AVT5	YBL089W	ERG26	P53199	349 aa	Known RBP	3.13	□□□□□ -1.91
AVT5	YBL089W	CUL3	P53202	744 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	EAF7	P53911	425 aa	Known RBP	3.13	□□□□□ -1.91
AVT5	YBL089W	YPL107W	Q02873	248 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	PDS5	Q04264	1277 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	RSF1	Q05043	376 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	MMR1	Q06324	491 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	CTF3	Q12748	733 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	YDL007C-A	Q2V2Q0	85 aa		3.13	□□□□□ -1.91
AVT5	YBL089W	BUD5	P25300	642 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	YME2	P32843	850 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	HCS1	P34243	683 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	TUL1	P36096	758 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	RRT2	P38332	387 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	KEL1	P38853	1164 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	POP2	P39008	433 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	HXT9	P40885	567 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	CAF130	P53280	1122 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	TAP42	Q04372	366 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	YMR034C	Q05131	434 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	DON1	Q05610	365 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	NRT1	Q08485	598 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	KEL3	Q08979	651 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	RPN5	Q12250	445 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	RRI1	Q12468	440 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	SNF3	P10870	884 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	SGV1	P23293	657 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	YCR043C	P25361	127 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
AVT5	YBL089W	IDH2	P28241	369 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	HEL1	P36113	551 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	LAS1	P36146	502 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	YHR054C	P38780	354 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	SAD1	P43589	448 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	YGL260W	P53056	76 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	PKP2	P53170	491 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	DRN1	P53255	507 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	YGR111W	P53265	400 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	KTR5	P53966	522 aa	Predicted RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	VTC3	Q02725	835 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	HEL2	Q05580	639 aa	Known RBP	3.12	□□□□□ -1.91
AVT5	YBL089W	ATG26	Q06321	1198 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	YDL057W	Q07379	328 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	SIL1	Q08199	421 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	SKS1	Q12505	502 aa		3.12	□□□□□ -1.91
AVT5	YBL089W	ARG81	P05085	880 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	PEP4	P07267	405 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	PUT2	P07275	575 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	RPL31B	P0C2H9	113 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	RPL1A	P0CX43	217 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	RPL1B	P0CX44	217 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	TRX1	P22217	103 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	RPN2	P32565	945 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	MIA40	P36046	403 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	SLM4	P38247	162 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	ARC40	P38328	384 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	TOM71	P38825	639 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	MET30	P39014	640 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	CIN4	P39110	191 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	YIL169C	P40442	995 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	EOS1	P53938	366 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	YMR160W	Q03823	816 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	ETT1	Q08421	412 aa	Known RBP	3.11	□□□□□ -1.91
AVT5	YBL089W	UAF30	Q08747	228 aa		3.11	□□□□□ -1.91
AVT5	YBL089W	NCE102	Q12207	173 aa	RIP-Chip data	3.11	□□□□□ -1.91	not detected
AVT5	YBL089W	HIP1	P06775	603 aa		3.1	□□□□□ -1.91
AVT5	YBL089W	CNA1	P23287	553 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms