RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeast

Gene SPC29, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC29	YPL124W	MHR1	Q06630	226 aa		2.81	□□□□□ -1.96
SPC29	YPL124W	YOR387C	Q08910	206 aa		2.81	□□□□□ -1.96
SPC29	YPL124W	YLR302C	O13544	120 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	CAR1	P00812	333 aa	Known RBP	2.8	□□□□□ -1.96
SPC29	YPL124W	ISY1	P21374	235 aa	Predicted RBP	2.8	□□□□□ -1.96
SPC29	YPL124W	NAM9	P27929	486 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	FUN19	P28003	413 aa	Predicted RBP	2.8	□□□□□ -1.96
SPC29	YPL124W	SYN8	P31377	255 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	MRP20	P32387	263 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	FMP10	P40098	244 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	ALG8	P40351	577 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	YGL039W	P53183	348 aa	Known RBP	2.8	□□□□□ -1.96
SPC29	YPL124W	ENT4	Q07872	247 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	TEN1	Q07921	160 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	TRM8	Q12009	286 aa		2.8	□□□□□ -1.96
SPC29	YPL124W	PEP5	P12868	1029 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	YME1	P32795	747 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	ALY1	P36117	915 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
SPC29	YPL124W	RPS7B	P48164	190 aa	Known RBP	2.79	□□□□□ -1.96
SPC29	YPL124W	DIA3	P52290	468 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	YLR152C	P54072	576 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	MSC1	Q03104	513 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	SLD5	Q03406	294 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	MRPL51	Q06090	140 aa	Predicted RBP	2.79	□□□□□ -1.96
SPC29	YPL124W	PSR1	Q07800	427 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	TMC1	Q08422	150 aa	Predicted RBP	2.79	□□□□□ -1.96
SPC29	YPL124W	NCE102	Q12207	173 aa	RIP-Chip data	2.79	□□□□□ -1.96	not detected
SPC29	YPL124W	NYV1	Q12255	253 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	ERV2	Q12284	196 aa		2.79	□□□□□ -1.96
SPC29	YPL124W	LPD1	P09624	499 aa	Known RBP	2.78	□□□□□ -1.96
SPC29	YPL124W	YEF3	P16521	1044 aa	Known RBP	2.78	□□□□□ -1.96
SPC29	YPL124W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.78	□□□□□ -1.96	not detected
SPC29	YPL124W	ADH7	P25377	361 aa		2.78	□□□□□ -1.96
SPC29	YPL124W	YGR210C	P42942	411 aa		2.78	□□□□□ -1.96
SPC29	YPL124W	DRN1	P53255	507 aa	Known RBP	2.78	□□□□□ -1.96
SPC29	YPL124W	BUD32	P53323	261 aa		2.78	□□□□□ -1.96
SPC29	YPL124W	TMS1	Q12116	473 aa		2.78	□□□□□ -1.96
SPC29	YPL124W	SNF1	P06782	633 aa	Known RBP	2.77	□□□□□ -1.97
SPC29	YPL124W	YCR007C	P25354	239 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	LSB5	P25369	354 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	FRE1	P32791	686 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	PRS1	P32895	427 aa	Known RBP	2.77	□□□□□ -1.97
SPC29	YPL124W	CNS1	P33313	385 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	MSN2	P33748	704 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	YKL100C	P34248	587 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	AAD10	P47182	288 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	TIS11	P47977	285 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	UBX4	P54730	416 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	SHR3	Q02774	210 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	YOR365C	Q08844	703 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	YOL087C	Q99247	1116 aa		2.77	□□□□□ -1.97
SPC29	YPL124W	SUC2	P00724	532 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	CBF2	P32504	956 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	YKL023W	P36103	277 aa	Known RBP	2.76	□□□□□ -1.97
SPC29	YPL124W	UME6	P39001	836 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	SNG1	P46950	547 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	YJR154W	P47181	346 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	EFM6	P53970	246 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	VID22	Q05934	901 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	VPS74	Q06385	345 aa		2.76	□□□□□ -1.97
SPC29	YPL124W	SUP35	P05453	685 aa	Known RBP	2.75	□□□□□ -1.97
SPC29	YPL124W	NAT1	P12945	854 aa	Known RBP	2.75	□□□□□ -1.97
SPC29	YPL124W	PUP3	P25451	205 aa	Known RBP	2.75	□□□□□ -1.97
SPC29	YPL124W	DEG1	P31115	442 aa	Known RBP	2.75	□□□□□ -1.97
SPC29	YPL124W	DBF20	P32328	564 aa		2.75	□□□□□ -1.97
SPC29	YPL124W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
SPC29	YPL124W	NUP133	P36161	1157 aa		2.75	□□□□□ -1.97
SPC29	YPL124W	SWD3	P38123	315 aa		2.75	□□□□□ -1.97
SPC29	YPL124W	DUG3	P53871	357 aa		2.75	□□□□□ -1.97
SPC29	YPL124W	ELP3	Q02908	557 aa	Known RBP	2.75	□□□□□ -1.97
SPC29	YPL124W	YPL272C	Q08984	517 aa		2.75	□□□□□ -1.97
SPC29	YPL124W	KGD1	P20967	1014 aa	Known RBP	2.74	□□□□□ -1.97
SPC29	YPL124W	SGF29	P25554	259 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	YBL055C	P34220	418 aa	Predicted RBP	2.74	□□□□□ -1.97
SPC29	YPL124W	YBL059W	P34224	193 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	APT1	P49435	187 aa	Known RBP	2.74	□□□□□ -1.97
SPC29	YPL124W	DSD1	P53095	428 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	APJ1	P53940	528 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	IRC15	Q02733	499 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	DPB4	Q04603	196 aa	Known RBP	2.74	□□□□□ -1.97
SPC29	YPL124W	RRG7	Q08774	242 aa	Predicted RBP	2.74	□□□□□ -1.97
SPC29	YPL124W	HRT3	Q12347	344 aa		2.74	□□□□□ -1.97
SPC29	YPL124W	VMA16	P23968	213 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	BOS1	P25385	244 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	NDT80	P38830	627 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	YHR210C	P38893	341 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	REE1	P40893	198 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	LYS4	P49367	693 aa	Predicted RBP	2.73	□□□□□ -1.97
SPC29	YPL124W	RRN11	Q04712	507 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	PBA1	Q05778	276 aa		2.73	□□□□□ -1.97
SPC29	YPL124W	RIX7	Q07844	837 aa	Known RBP	2.73	□□□□□ -1.97
SPC29	YPL124W	CPR1	P14832	162 aa	Known RBP	2.72	□□□□□ -1.97
SPC29	YPL124W	ARO2	P28777	376 aa	Known RBP	2.72	□□□□□ -1.97
SPC29	YPL124W	UTR4	P32626	227 aa		2.72	□□□□□ -1.97
SPC29	YPL124W	KTR3	P38130	404 aa	Predicted RBP	2.72	□□□□□ -1.97
SPC29	YPL124W	LSP1	Q12230	341 aa	Known RBP	2.72	□□□□□ -1.97
SPC29	YPL124W	HHF1	P02309	103 aa	Known RBP	2.71	□□□□□ -1.98
SPC29	YPL124W	HIP1	P06775	603 aa		2.71	□□□□□ -1.98
SPC29	YPL124W	RAD52	P06778	471 aa	Known RBP	2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms