RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C PBA1Q05778 276 aa3.2□□□□□ -1.9
VPS20YMR077C VPS74Q06385 345 aa3.2□□□□□ -1.9
VPS20YMR077C LEU9Q12166 604 aaKnown RBP3.2□□□□□ -1.9
VPS20YMR077C HRT3Q12347 344 aa3.2□□□□□ -1.9
VPS20YMR077C MTF2P10849 440 aa3.19□□□□□ -1.9
VPS20YMR077C PEP5P12868 1029 aa3.19□□□□□ -1.9
VPS20YMR077C CPR1P14832 162 aaKnown RBP3.19□□□□□ -1.9
VPS20YMR077C RNA14P25298 677 aaKnown RBP3.19□□□□□ -1.9
VPS20YMR077C ARK1P53974 638 aa3.19□□□□□ -1.9
VPS20YMR077C MUB1Q03162 620 aa3.19□□□□□ -1.9
VPS20YMR077C TMS1Q12116 473 aa3.19□□□□□ -1.9
VPS20YMR077C UBC1P21734 215 aaKnown RBP3.18□□□□□ -1.9
VPS20YMR077C MTR2P34232 184 aaKnown RBP3.18□□□□□ -1.9
VPS20YMR077C ARC35P53731 342 aaKnown RBP3.18□□□□□ -1.9
VPS20YMR077C SHR3Q02774 210 aa3.18□□□□□ -1.9
VPS20YMR077C PDB1P32473 366 aaKnown RBP3.17□□□□□ -1.9
VPS20YMR077C SWD3P38123 315 aa3.17□□□□□ -1.9
VPS20YMR077C HAT2P39984 401 aa3.17□□□□□ -1.9
VPS20YMR077C DIA3P52290 468 aa3.17□□□□□ -1.9
VPS20YMR077C DUG3P53871 357 aa3.17□□□□□ -1.9
VPS20YMR077C SKG3Q06315 1026 aa3.17□□□□□ -1.9
VPS20YMR077C YDL012CQ12489 107 aa3.17□□□□□ -1.9
VPS20YMR077C MSM1P22438 575 aa3.16□□□□□ -1.9
VPS20YMR077C BUD5P25300 642 aaPredicted RBP3.16□□□□□ -1.9
VPS20YMR077C MRP4P32902 394 aa3.16□□□□□ -1.9
VPS20YMR077C YKL100CP34248 587 aa3.16□□□□□ -1.9
VPS20YMR077C YKL023WP36103 277 aaKnown RBP3.16□□□□□ -1.9
VPS20YMR077C IFA38P38286 347 aa3.16□□□□□ -1.9
VPS20YMR077C SCD6P45978 349 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
VPS20YMR077C IRC15Q02733 499 aa3.16□□□□□ -1.9
VPS20YMR077C TEN1Q07921 160 aa3.16□□□□□ -1.9
VPS20YMR077C YLR302CO13544 120 aa3.15□□□□□ -1.91
VPS20YMR077C PFK2P16862 959 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
VPS20YMR077C EXO70P19658 623 aa3.15□□□□□ -1.91
VPS20YMR077C YCR007CP25354 239 aa3.15□□□□□ -1.91
VPS20YMR077C ADH7P25377 361 aa3.15□□□□□ -1.91
VPS20YMR077C PSD1P39006 500 aa3.15□□□□□ -1.91
VPS20YMR077C SNG1P46950 547 aa3.15□□□□□ -1.91
VPS20YMR077C PSR1Q07800 427 aa3.15□□□□□ -1.91
VPS20YMR077C CLN3P13365 580 aa3.14□□□□□ -1.91
VPS20YMR077C SGV1P23293 657 aaKnown RBP3.14□□□□□ -1.91
VPS20YMR077C FRE1P32791 686 aa3.14□□□□□ -1.91
VPS20YMR077C TEF4P36008 412 aaKnown RBP3.14□□□□□ -1.91
VPS20YMR077C GRX7P38068 203 aa3.14□□□□□ -1.91
VPS20YMR077C SLZ1P40167 298 aa3.14□□□□□ -1.91
VPS20YMR077C RIC1P40395 1056 aa3.14□□□□□ -1.91
VPS20YMR077C REE1P40893 198 aa3.14□□□□□ -1.91
VPS20YMR077C SLD5Q03406 294 aa3.14□□□□□ -1.91
VPS20YMR077C CIA1Q05583 330 aa3.14□□□□□ -1.91
VPS20YMR077C TFC6Q06339 672 aa3.14□□□□□ -1.91
VPS20YMR077C LSP1Q12230 341 aaKnown RBP3.14□□□□□ -1.91
VPS20YMR077C ATP4P05626 244 aa3.13□□□□□ -1.91
VPS20YMR077C HEM15P16622 393 aa3.13□□□□□ -1.91
VPS20YMR077C ACA1P39970 489 aa3.13□□□□□ -1.91
VPS20YMR077C YIL067CP40514 678 aa3.13□□□□□ -1.91
VPS20YMR077C YFL067WP43537 175 aa3.13□□□□□ -1.91
VPS20YMR077C YJR154WP47181 346 aa3.13□□□□□ -1.91
VPS20YMR077C RPS7BP48164 190 aaKnown RBP3.13□□□□□ -1.91
VPS20YMR077C YMR027WQ04371 470 aa3.13□□□□□ -1.91
VPS20YMR077C RCO1Q04779 684 aa3.13□□□□□ -1.91
VPS20YMR077C RTT109Q07794 436 aa3.13□□□□□ -1.91
VPS20YMR077C ESA1Q08649 445 aa3.13□□□□□ -1.91
VPS20YMR077C RBD2Q12270 262 aa3.13□□□□□ -1.91
VPS20YMR077C SGF29P25554 259 aa3.12□□□□□ -1.91
VPS20YMR077C SIM1P40472 476 aa3.12□□□□□ -1.91
VPS20YMR077C ELP2P42935 788 aa3.12□□□□□ -1.91
VPS20YMR077C SHY1P53266 389 aa3.12□□□□□ -1.91
VPS20YMR077C HIP1P06775 603 aa3.11□□□□□ -1.91
VPS20YMR077C RPB2P08518 1224 aaKnown RBP3.11□□□□□ -1.91
VPS20YMR077C PWP1P21304 576 aaKnown RBP3.11□□□□□ -1.91
VPS20YMR077C RVS161P25343 265 aaKnown RBP3.11□□□□□ -1.91
VPS20YMR077C XRS2P33301 854 aa3.11□□□□□ -1.91
VPS20YMR077C PIL1P53252 339 aaKnown RBP3.11□□□□□ -1.91
VPS20YMR077C CAF40P53829 373 aa3.11□□□□□ -1.91
VPS20YMR077C IVY1Q04934 453 aa3.11□□□□□ -1.91
VPS20YMR077C VMA16P23968 213 aa3.1□□□□□ -1.91
VPS20YMR077C CNS1P33313 385 aa3.1□□□□□ -1.91
VPS20YMR077C SDH3P33421 198 aa3.1□□□□□ -1.91
VPS20YMR077C UME6P39001 836 aa3.1□□□□□ -1.91
VPS20YMR077C PTR3P43606 678 aa3.1□□□□□ -1.91
VPS20YMR077C YGR127WP53275 312 aa3.1□□□□□ -1.91
VPS20YMR077C BUD32P53323 261 aa3.1□□□□□ -1.91
VPS20YMR077C BLS1Q06071 122 aa3.1□□□□□ -1.91
VPS20YMR077C ADH2P00331 348 aaKnown RBP3.09□□□□□ -1.91
VPS20YMR077C SUI2P20459 304 aaKnown RBP3.09□□□□□ -1.91
VPS20YMR077C GWT1P47026 490 aa3.09□□□□□ -1.91
VPS20YMR077C RNY1Q02933 434 aaKnown RBP3.09□□□□□ -1.91
VPS20YMR077C BOS1P25385 244 aa3.08□□□□□ -1.92
VPS20YMR077C UTR4P32626 227 aa3.08□□□□□ -1.92
VPS20YMR077C DPB4Q04603 196 aaKnown RBP3.08□□□□□ -1.92
VPS20YMR077C MRPL35Q06678 367 aa3.08□□□□□ -1.92
VPS20YMR077C HCS1P34243 683 aa3.07□□□□□ -1.92
VPS20YMR077C ALY1P36117 915 aa3.07□□□□□ -1.92
VPS20YMR077C KTR3P38130 404 aaPredicted RBP3.07□□□□□ -1.92
VPS20YMR077C DSD1P53095 428 aa3.07□□□□□ -1.92
VPS20YMR077C YGR126WP53274 230 aa3.07□□□□□ -1.92
VPS20YMR077C YBL055CP34220 418 aaPredicted RBP3.06□□□□□ -1.92
VPS20YMR077C ICS2P38284 255 aa3.06□□□□□ -1.92
VPS20YMR077C YHR210CP38893 341 aa3.06□□□□□ -1.92
VPS20YMR077C TMA108P40462 946 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms