RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W PMT1P33775 817 aa2.48□□□□□ -2.01
HRD3YLR207W CMC1P36064 111 aa2.48□□□□□ -2.01
HRD3YLR207W RPF2P36160 344 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W KSP1P38691 1029 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W MUP3P38734 546 aa2.48□□□□□ -2.01
HRD3YLR207W LAS21P40367 830 aa2.48□□□□□ -2.01
HRD3YLR207W YIL089WP40500 205 aa2.48□□□□□ -2.01
HRD3YLR207W SGN1P40561 250 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
HRD3YLR207W IRC8P47046 822 aa2.48□□□□□ -2.01
HRD3YLR207W SPC98P53540 846 aa2.48□□□□□ -2.01
HRD3YLR207W RPL6AQ02326 176 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W HOT1Q03213 719 aa2.48□□□□□ -2.01
HRD3YLR207W RSM28Q03430 361 aa2.48□□□□□ -2.01
HRD3YLR207W GTB1Q04924 702 aa2.48□□□□□ -2.01
HRD3YLR207W RGC1Q06108 1083 aaKnown RBP2.48□□□□□ -2.01
HRD3YLR207W SWA2Q06677 668 aa2.48□□□□□ -2.01
HRD3YLR207W VPS54Q12071 889 aa2.48□□□□□ -2.01
HRD3YLR207W YBR255C-AQ3E776 120 aa2.48□□□□□ -2.01
HRD3YLR207W RIM15P43565 1770 aa2.48□□□□□ -2.01
HRD3YLR207W DAL80P26343 269 aa2.47□□□□□ -2.01
HRD3YLR207W MSS1P32559 526 aaPredicted RBP2.47□□□□□ -2.01
HRD3YLR207W SRB5P32585 307 aa2.47□□□□□ -2.01
HRD3YLR207W SEF1P34228 1148 aa2.47□□□□□ -2.01
HRD3YLR207W HCS1P34243 683 aa2.47□□□□□ -2.01
HRD3YLR207W BUR6P40096 142 aa2.47□□□□□ -2.01
HRD3YLR207W YFH7P43591 353 aa2.47□□□□□ -2.01
HRD3YLR207W TWF1P53250 332 aa2.47□□□□□ -2.01
HRD3YLR207W BUD17P53727 317 aa2.47□□□□□ -2.01
HRD3YLR207W KAP120Q02932 1032 aa2.47□□□□□ -2.01
HRD3YLR207W MMR1Q06324 491 aa2.47□□□□□ -2.01
HRD3YLR207W RTC5Q12108 567 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W PMA1P05030 918 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W CBP1P07252 654 aa2.47□□□□□ -2.01
HRD3YLR207W APN1P22936 367 aa2.47□□□□□ -2.01
HRD3YLR207W LRE1P25579 583 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W PPQ1P32945 549 aa2.47□□□□□ -2.01
HRD3YLR207W TSA1P34760 196 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W SHC1P39000 512 aa2.47□□□□□ -2.01
HRD3YLR207W OSW5P40219 148 aa2.47□□□□□ -2.01
HRD3YLR207W SEC24P40482 926 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W SEC27P41811 889 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W DLD2P46681 530 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W PET130P47065 347 aa2.47□□□□□ -2.01
HRD3YLR207W MLC1P53141 149 aa2.47□□□□□ -2.01
HRD3YLR207W YGL036WP53185 909 aaPredicted RBP2.47□□□□□ -2.01
HRD3YLR207W YGR079WP53249 370 aa2.47□□□□□ -2.01
HRD3YLR207W SNF12P53628 566 aa2.47□□□□□ -2.01
HRD3YLR207W YNR068CP53754 272 aa2.47□□□□□ -2.01
HRD3YLR207W ARX1Q03862 593 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W ARG7Q04728 441 aa2.47□□□□□ -2.01
HRD3YLR207W RQC1Q05468 723 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W MRD1Q06106 887 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W VTA1Q06263 330 aa2.47□□□□□ -2.01
HRD3YLR207W HER1Q12276 1246 aa2.47□□□□□ -2.01
HRD3YLR207W YDR061WQ12298 539 aa2.47□□□□□ -2.01
HRD3YLR207W MDM20Q12387 796 aaKnown RBP2.47□□□□□ -2.01
HRD3YLR207W SPE4Q12455 300 aa2.47□□□□□ -2.01
HRD3YLR207W SAC3P46674 1301 aa2.47□□□□□ -2.01
HRD3YLR207W YLR278CQ05854 1341 aa2.47□□□□□ -2.01
HRD3YLR207W TPK2P06245 380 aa2.46□□□□□ -2.01
HRD3YLR207W HOM2P13663 365 aaKnown RBP2.46□□□□□ -2.01
HRD3YLR207W KRS1P15180 591 aaKnown RBP2.46□□□□□ -2.01
HRD3YLR207W PDA1P16387 420 aaKnown RBP2.46□□□□□ -2.01
HRD3YLR207W CNE1P27825 502 aa2.46□□□□□ -2.01
HRD3YLR207W MRPL9P31334 269 aa2.46□□□□□ -2.01
HRD3YLR207W CDC5P32562 705 aa2.46□□□□□ -2.01
HRD3YLR207W YEL043WP32618 956 aa2.46□□□□□ -2.01
HRD3YLR207W NIP100P33420 868 aa2.46□□□□□ -2.01
HRD3YLR207W LTV1P34078 463 aa2.46□□□□□ -2.01
HRD3YLR207W HEL1P36113 551 aa2.46□□□□□ -2.01
HRD3YLR207W GMH1P36125 273 aa2.46□□□□□ -2.01
HRD3YLR207W GLG1P36143 616 aa2.46□□□□□ -2.01
HRD3YLR207W AAP1P37898 856 aaKnown RBP2.46□□□□□ -2.01
HRD3YLR207W PPS1P38148 807 aa2.46□□□□□ -2.01
HRD3YLR207W GDT1P38301 280 aaPredicted RBP2.46□□□□□ -2.01
HRD3YLR207W PCL5P38794 229 aa2.46□□□□□ -2.01
HRD3YLR207W BUD16P39988 312 aa2.46□□□□□ -2.01
HRD3YLR207W ALG5P40350 334 aa2.46□□□□□ -2.01
HRD3YLR207W NDC80P40460 691 aa2.46□□□□□ -2.01
HRD3YLR207W HXT14P42833 540 aa2.46□□□□□ -2.01
HRD3YLR207W PMT6P42934 759 aa2.46□□□□□ -2.01
HRD3YLR207W STR3P53101 465 aaKnown RBP2.46□□□□□ -2.01
HRD3YLR207W COG2P53271 262 aa2.46□□□□□ -2.01
HRD3YLR207W PPM1Q04081 328 aa2.46□□□□□ -2.01
HRD3YLR207W FMP40Q08968 688 aaPredicted RBP2.46□□□□□ -2.01
HRD3YLR207W PSY3Q12318 242 aa2.46□□□□□ -2.01
HRD3YLR207W TRM13Q12383 476 aa2.46□□□□□ -2.01
HRD3YLR207W PFK27Q12471 397 aaPredicted RBP2.46□□□□□ -2.01
HRD3YLR207W LAM4P38800 1345 aa2.46□□□□□ -2.02
HRD3YLR207W POM152P39685 1337 aa2.46□□□□□ -2.02
HRD3YLR207W IRA1P18963 3092 aa2.46□□□□□ -2.02
HRD3YLR207W ARD1P07347 238 aaPredicted RBP2.46□□□□□ -2.02
HRD3YLR207W RPL1AP0CX43 217 aaKnown RBP2.46□□□□□ -2.02
HRD3YLR207W RPL1BP0CX44 217 aaKnown RBP2.46□□□□□ -2.02
HRD3YLR207W OM45P16547 393 aa2.46□□□□□ -2.02
HRD3YLR207W COQ1P18900 473 aa2.46□□□□□ -2.02
HRD3YLR207W NIP1P32497 812 aaKnown RBP2.46□□□□□ -2.02
HRD3YLR207W SUR1P33300 382 aa2.46□□□□□ -2.02
HRD3YLR207W RRP1P35178 278 aaPredicted RBP2.46□□□□□ -2.02
HRD3YLR207W TIF5P38431 405 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms