RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W RPL3P14126 387 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W RED1P14291 827 aa1.04□□□□□ -2.24
PRP16YKR086W PDA1P16387 420 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W SPO16P17122 198 aa1.04□□□□□ -2.24
PRP16YKR086W SRP54P20424 541 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W TRX1P22217 103 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W KAP104P38217 918 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W MUM2P38236 366 aa1.04□□□□□ -2.24
PRP16YKR086W ARC40P38328 384 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W DBP8P38719 431 aa1.04□□□□□ -2.24
PRP16YKR086W WSC4P38739 605 aa1.04□□□□□ -2.24
PRP16YKR086W TOM71P38825 639 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W MTC6P38849 526 aa1.04□□□□□ -2.24
PRP16YKR086W YJL068CP40363 299 aa1.04□□□□□ -2.24
PRP16YKR086W SEC27P41811 889 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W SPG5P42933 373 aa1.04□□□□□ -2.24
PRP16YKR086W RRT6P53117 311 aaPredicted RBP1.04□□□□□ -2.24
PRP16YKR086W SGF73P53165 657 aa1.04□□□□□ -2.24
PRP16YKR086W NUP53Q03790 475 aa1.04□□□□□ -2.24
PRP16YKR086W CIA1Q05583 330 aa1.04□□□□□ -2.24
PRP16YKR086W UTP21Q06078 939 aaPredicted RBP1.04□□□□□ -2.24
PRP16YKR086W YPL191CQ08930 360 aa1.04□□□□□ -2.24
PRP16YKR086W LEA1Q08963 238 aaPredicted RBP1.04□□□□□ -2.24
PRP16YKR086W STE2D6VTK4 431 aa1.04□□□□□ -2.24
PRP16YKR086W FUM1P08417 488 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W CHO1P08456 276 aa1.04□□□□□ -2.24
PRP16YKR086W GPA1P08539 472 aa1.04□□□□□ -2.24
PRP16YKR086W RAP1P11938 827 aa1.04□□□□□ -2.24
PRP16YKR086W SIR1P21691 654 aa1.04□□□□□ -2.24
PRP16YKR086W PTC6P25646 442 aa1.04□□□□□ -2.24
PRP16YKR086W HES1P35843 434 aa1.04□□□□□ -2.24
PRP16YKR086W ECM8P38246 354 aa1.04□□□□□ -2.24
PRP16YKR086W ARN1P38731 627 aa1.04□□□□□ -2.24
PRP16YKR086W SPC97P38863 823 aa1.04□□□□□ -2.24
PRP16YKR086W ESL1P40456 1118 aa1.04□□□□□ -2.24
PRP16YKR086W AZF1P41696 914 aa1.04□□□□□ -2.24
PRP16YKR086W VTC2P43585 828 aa1.04□□□□□ -2.24
PRP16YKR086W MSY1P48527 492 aa1.04□□□□□ -2.24
PRP16YKR086W DPB4Q04603 196 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W YDL218WQ07629 317 aa1.04□□□□□ -2.24
PRP16YKR086W TLG2Q08144 397 aa1.04□□□□□ -2.24
PRP16YKR086W RIM20Q12033 661 aa1.04□□□□□ -2.24
PRP16YKR086W YLR112WQ12130 139 aa1.04□□□□□ -2.24
PRP16YKR086W PCD1Q12524 340 aa1.04□□□□□ -2.24
PRP16YKR086W CSR2Q12734 1121 aa1.04□□□□□ -2.24
PRP16YKR086W YBR255C-AQ3E776 120 aa1.04□□□□□ -2.24
PRP16YKR086W YBR126W-AQ8TGU7 68 aa1.04□□□□□ -2.24
PRP16YKR086W YER145C-AA0A023PYF4 145 aa1.04□□□□□ -2.24
PRP16YKR086W RPL42AP0CX27 106 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W RPL42BP0CX28 106 aaKnown RBP1.04□□□□□ -2.24
PRP16YKR086W MTF2P10849 440 aa1.04□□□□□ -2.24
PRP16YKR086W UBP13P38187 747 aa1.04□□□□□ -2.24
PRP16YKR086W YLF2P38746 405 aa1.04□□□□□ -2.24
PRP16YKR086W END3P39013 349 aa1.04□□□□□ -2.24
PRP16YKR086W PHM8P40025 321 aa1.04□□□□□ -2.24
PRP16YKR086W PCL6P40038 420 aa1.04□□□□□ -2.24
PRP16YKR086W YIA6P40556 373 aa1.04□□□□□ -2.24
PRP16YKR086W YMR034CQ05131 434 aaPredicted RBP1.04□□□□□ -2.24
PRP16YKR086W RTT103Q05543 409 aa1.04□□□□□ -2.24
PRP16YKR086W SMC5Q08204 1093 aa1.04□□□□□ -2.24
PRP16YKR086W NRT1Q08485 598 aa1.04□□□□□ -2.24
PRP16YKR086W SUL2Q12325 893 aa1.04□□□□□ -2.24
PRP16YKR086W CBP1P07252 654 aa1.03□□□□□ -2.24
PRP16YKR086W MSS18P08593 268 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-LR1P0C2J4 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-FP0CX61 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-GR2P0CX62 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-CP25383 438 aa1.03□□□□□ -2.24
PRP16YKR086W POL4P25615 582 aa1.03□□□□□ -2.24
PRP16YKR086W URK1P27515 501 aa1.03□□□□□ -2.24
PRP16YKR086W SMI1P32566 505 aa1.03□□□□□ -2.24
PRP16YKR086W YOX1P34161 385 aa1.03□□□□□ -2.24
PRP16YKR086W GCS1P35197 352 aa1.03□□□□□ -2.24
PRP16YKR086W ESL2P36168 1195 aa1.03□□□□□ -2.24
PRP16YKR086W EXO84P38261 753 aa1.03□□□□□ -2.24
PRP16YKR086W SNL1P40548 159 aa1.03□□□□□ -2.24
PRP16YKR086W HXT9P40885 567 aa1.03□□□□□ -2.24
PRP16YKR086W LSC1P53598 329 aaKnown RBP1.03□□□□□ -2.24
PRP16YKR086W GIS2P53849 153 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
PRP16YKR086W TY2A-DR2Q03483 438 aa1.03□□□□□ -2.24
PRP16YKR086W MRPL1Q04599 285 aa1.03□□□□□ -2.24
PRP16YKR086W YLR352WQ06479 807 aa1.03□□□□□ -2.24
PRP16YKR086W CDC45Q08032 650 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-BQ12260 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-OR2Q12293 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-DR1Q12392 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-OR1Q12439 438 aa1.03□□□□□ -2.24
PRP16YKR086W TY2A-DR3Q99303 438 aa1.03□□□□□ -2.24
PRP16YKR086W ATP4P05626 244 aa1.03□□□□□ -2.24
PRP16YKR086W YML003WP0CF16 290 aa1.03□□□□□ -2.24
PRP16YKR086W MRS3P10566 314 aa1.03□□□□□ -2.24
PRP16YKR086W STE50P25344 346 aa1.03□□□□□ -2.24
PRP16YKR086W SYN8P31377 255 aa1.03□□□□□ -2.24
PRP16YKR086W MFT1P33441 392 aaKnown RBP1.03□□□□□ -2.24
PRP16YKR086W MPE1P35728 441 aaKnown RBP1.03□□□□□ -2.24
PRP16YKR086W YKL050CP35736 922 aa1.03□□□□□ -2.24
PRP16YKR086W ALY1P36117 915 aa1.03□□□□□ -2.24
PRP16YKR086W YBR056WP38081 501 aa1.03□□□□□ -2.24
PRP16YKR086W YBL028CP38202 106 aa1.03□□□□□ -2.24
PRP16YKR086W YHL041WP38730 149 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 92.5 ms