RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SAF1P38352 637 aa2.09□□□□□ -2.08
RTT107YHR154W ARP1P38696 384 aa2.09□□□□□ -2.08
RTT107YHR154W YHR112CP38716 378 aa2.09□□□□□ -2.08
RTT107YHR154W SMC2P38989 1170 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W IMD4P50094 524 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W SNF12P53628 566 aa2.09□□□□□ -2.08
RTT107YHR154W HEF3P53978 1044 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W SMA1Q02651 245 aa2.09□□□□□ -2.08
RTT107YHR154W VTC3Q02725 835 aa2.09□□□□□ -2.08
RTT107YHR154W KAP120Q02932 1032 aa2.09□□□□□ -2.08
RTT107YHR154W GIS1Q03833 894 aa2.09□□□□□ -2.08
RTT107YHR154W GRX3Q03835 250 aa2.09□□□□□ -2.08
RTT107YHR154W ARG7Q04728 441 aa2.09□□□□□ -2.08
RTT107YHR154W HCR1Q05775 265 aaKnown RBP2.09□□□□□ -2.08
RTT107YHR154W PEX19Q07418 342 aa2.09□□□□□ -2.08
RTT107YHR154W RAD61Q99359 647 aa2.09□□□□□ -2.08
RTT107YHR154W ARD1P07347 238 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W URA4P20051 364 aa2.08□□□□□ -2.08
RTT107YHR154W MBR1P23493 339 aa2.08□□□□□ -2.08
RTT107YHR154W HCM1P25364 564 aa2.08□□□□□ -2.08
RTT107YHR154W RFA2P26754 273 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W PHO91P27514 894 aa2.08□□□□□ -2.08
RTT107YHR154W MCM4P30665 933 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W MVD1P32377 396 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W CMC1P36064 111 aa2.08□□□□□ -2.08
RTT107YHR154W HEL1P36113 551 aa2.08□□□□□ -2.08
RTT107YHR154W MRPL37P36532 105 aa2.08□□□□□ -2.08
RTT107YHR154W ADH5P38113 351 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W YSW1P38280 609 aa2.08□□□□□ -2.08
RTT107YHR154W NTC20P38302 140 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W FAD1P38913 306 aa2.08□□□□□ -2.08
RTT107YHR154W SPT8P38915 602 aa2.08□□□□□ -2.08
RTT107YHR154W MPT5P39016 859 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
RTT107YHR154W MEF2P39677 819 aa2.08□□□□□ -2.08
RTT107YHR154W DLD2P46681 530 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W CTK2P46962 323 aa2.08□□□□□ -2.08
RTT107YHR154W ALT2P52892 507 aa2.08□□□□□ -2.08
RTT107YHR154W PAN2P53010 1115 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W YGL036WP53185 909 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W PDR16P53860 351 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W ARG5,6Q01217 863 aa2.08□□□□□ -2.08
RTT107YHR154W AAT1Q01802 451 aa2.08□□□□□ -2.08
RTT107YHR154W TOF2Q02208 771 aa2.08□□□□□ -2.08
RTT107YHR154W MUB1Q03162 620 aa2.08□□□□□ -2.08
RTT107YHR154W ROT1Q03691 256 aa2.08□□□□□ -2.08
RTT107YHR154W EMI2Q04409 500 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W MCM21Q06675 368 aa2.08□□□□□ -2.08
RTT107YHR154W FMP40Q08968 688 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W TY1A-NL1Q12391 440 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W RRP36Q12481 300 aaPredicted RBP2.08□□□□□ -2.08
RTT107YHR154W RIF1P29539 1916 aa2.08□□□□□ -2.08
RTT107YHR154W SAM35P14693 329 aa2.08□□□□□ -2.08
RTT107YHR154W NTG1P31378 399 aa2.08□□□□□ -2.08
RTT107YHR154W YPT7P32939 208 aa2.08□□□□□ -2.08
RTT107YHR154W TUL1P36096 758 aa2.08□□□□□ -2.08
RTT107YHR154W CTF8P38877 133 aa2.08□□□□□ -2.08
RTT107YHR154W END3P39013 349 aa2.08□□□□□ -2.08
RTT107YHR154W ALD5P40047 520 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W LRO1P40345 661 aa2.08□□□□□ -2.08
RTT107YHR154W FKH2P41813 862 aa2.08□□□□□ -2.08
RTT107YHR154W PTR3P43606 678 aa2.08□□□□□ -2.08
RTT107YHR154W DIA3P52290 468 aa2.08□□□□□ -2.08
RTT107YHR154W YGR079WP53249 370 aa2.08□□□□□ -2.08
RTT107YHR154W ASI2P53895 289 aa2.08□□□□□ -2.08
RTT107YHR154W INN1P53901 409 aa2.08□□□□□ -2.08
RTT107YHR154W MFM1Q02783 413 aa2.08□□□□□ -2.08
RTT107YHR154W AIM6Q07716 390 aa2.08□□□□□ -2.08
RTT107YHR154W MF(ALPHA)1P01149 165 aa2.08□□□□□ -2.08
RTT107YHR154W RPL1AP0CX43 217 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W RPL1BP0CX44 217 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W BOS1P25385 244 aa2.08□□□□□ -2.08
RTT107YHR154W LTV1P34078 463 aa2.08□□□□□ -2.08
RTT107YHR154W SRB2P34162 210 aa2.08□□□□□ -2.08
RTT107YHR154W KKQ8P36004 724 aa2.08□□□□□ -2.08
RTT107YHR154W MMF1P40185 145 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W TWF1P53250 332 aa2.08□□□□□ -2.08
RTT107YHR154W DCP2P53550 970 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W PRM1P53835 661 aa2.08□□□□□ -2.08
RTT107YHR154W YAP6Q03935 383 aa2.08□□□□□ -2.08
RTT107YHR154W SIZ1Q04195 904 aa2.08□□□□□ -2.08
RTT107YHR154W PDS5Q04264 1277 aa2.08□□□□□ -2.08
RTT107YHR154W MRD1Q06106 887 aaKnown RBP2.08□□□□□ -2.08
RTT107YHR154W PIG1Q06216 648 aa2.08□□□□□ -2.08
RTT107YHR154W YLR413WQ06689 675 aa2.08□□□□□ -2.08
RTT107YHR154W TPO1Q07824 586 aa2.08□□□□□ -2.08
RTT107YHR154W VCX1Q99385 411 aa2.08□□□□□ -2.08
RTT107YHR154W CYC1P00044 109 aaPredicted RBP2.07□□□□□ -2.08
RTT107YHR154W DMC1P25453 334 aa2.07□□□□□ -2.08
RTT107YHR154W GSH1P32477 678 aa2.07□□□□□ -2.08
RTT107YHR154W UTR4P32626 227 aa2.07□□□□□ -2.08
RTT107YHR154W MTC7P32633 139 aa2.07□□□□□ -2.08
RTT107YHR154W YME2P32843 850 aa2.07□□□□□ -2.08
RTT107YHR154W PTK1P36002 662 aaPredicted RBP2.07□□□□□ -2.08
RTT107YHR154W TCD2P36101 447 aaKnown RBP2.07□□□□□ -2.08
RTT107YHR154W SLM4P38247 162 aa2.07□□□□□ -2.08
RTT107YHR154W MMS4P38257 691 aa2.07□□□□□ -2.08
RTT107YHR154W ICS2P38284 255 aa2.07□□□□□ -2.08
RTT107YHR154W GDT1P38301 280 aaPredicted RBP2.07□□□□□ -2.08
RTT107YHR154W BFR1P38934 470 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08 RIP-Chip
RTT107YHR154W SEC31P38968 1273 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms