RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	ARG82	P07250	355 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	PCK1	P10963	549 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	CHL1	P22516	861 aa	Predicted RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	GEX2	P36173	615 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	JHD1	P40034	492 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	YMR147W	P40218	223 aa	Known RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	FMC1	P40491	155 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	ERG10	P41338	398 aa	Known RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	PET130	P47065	347 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	LIF1	P53150	421 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	RHO5	P53879	331 aa	Known RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	RPS15	Q01855	142 aa	Known RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	YMR265C	Q03508	461 aa	Known RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	MUS81	Q04149	632 aa	Predicted RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	THI7	Q05998	598 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	GPN2	Q08726	347 aa	Predicted RBP	4.38	□□□□□ -1.71
PFK1	YGR240C	ELG1	Q12050	791 aa		4.38	□□□□□ -1.71
PFK1	YGR240C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
PFK1	YGR240C	SSC1	P0CS90	654 aa	Known RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
PFK1	YGR240C	YBL055C	P34220	418 aa	Predicted RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	OSH7	P38755	437 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	AAD14	P42884	376 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	SET4	P42948	560 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	YGR126W	P53274	230 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	RRN9	P53437	365 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	GOR1	P53839	350 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	ATG23	Q06671	453 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	IWR1	Q07532	353 aa	Predicted RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	NBP2	Q12163	236 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	INP53	Q12271	1107 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	MBR1	P23493	339 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	ADY2	P25613	283 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	YBL029W	P38201	376 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	SOP4	P39543	234 aa	Predicted RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	SEC72	P39742	193 aa	Known RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	FIR1	P40020	876 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	PCI8	P40512	444 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	SLI1	P53304	468 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	YGR283C	P53336	341 aa	Predicted RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	CUS2	P53830	285 aa	Predicted RBP	4.37	□□□□□ -1.71
PFK1	YGR240C	ATP25	Q03153	612 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	YDR061W	Q12298	539 aa		4.37	□□□□□ -1.71
PFK1	YGR240C	PRP4	P20053	465 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	RAM1	P22007	431 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	PET18	P25362	215 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	YCL068C	P25593	260 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	YCR061W	P25639	631 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	BEM1	P29366	551 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	SIP1	P32578	815 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	PGM2	P37012	569 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	FHL1	P39521	936 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	INP51	P40559	946 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
PFK1	YGR240C	RPA14	P50106	137 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	YGR127W	P53275	312 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	ORC4	P54791	529 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	RMI1	Q02685	241 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	ARO80	Q04052	950 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	GPN3	Q06543	272 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	FLO11	P08640	1367 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	TUB2	P02557	457 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	ARG4	P04076	463 aa	Predicted RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	DED1	P06634	604 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	MSF1	P08425	469 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	UGA1	P17649	471 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	SEC65	P29478	273 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	MVD1	P32377	396 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	SLA2	P33338	968 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	PRX1	P34227	261 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	SLZ1	P40167	298 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	GAB1	P41733	394 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	ECL1	P48235	211 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	YKE2	P52553	114 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	YGL185C	P53100	379 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	SOV1	Q04748	898 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	ERF2	Q06551	359 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	VPS36	Q06696	566 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	NDE2	Q07500	545 aa		4.36	□□□□□ -1.71
PFK1	YGR240C	SDO1	Q07953	250 aa	Known RBP	4.36	□□□□□ -1.71
PFK1	YGR240C	HIS4	P00815	799 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	GPH1	P06738	902 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	CAF20	P12962	161 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	RHB1	P25378	209 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	FAA1	P30624	700 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	KNS1	P32350	737 aa	Predicted RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	LDH1	P38139	375 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	CDS1	P38221	457 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	RFC4	P40339	323 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	QDR2	P40474	542 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	EAF6	P47128	113 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	STB4	P50104	949 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	NMA111	P53920	997 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	MYO5	Q04439	1219 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	DPL1	Q05567	589 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	CTS2	Q06350	511 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	XYL2	Q07993	356 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	UAF30	Q08747	228 aa		4.35	□□□□□ -1.71
PFK1	YGR240C	CDC37	P06101	506 aa	Known RBP	4.35	□□□□□ -1.71
PFK1	YGR240C	ALG1	P16661	449 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms