RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TCA17, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCA17	YEL048C	SIP2	P34164	415 aa	Known RBP	4.27	□□□□□ -1.73
TCA17	YEL048C	CSM2	P40465	213 aa		4.27	□□□□□ -1.73
TCA17	YEL048C	YGR126W	P53274	230 aa		4.27	□□□□□ -1.73
TCA17	YEL048C	YML037C	Q03703	340 aa		4.27	□□□□□ -1.73
TCA17	YEL048C	LUC7	Q07508	261 aa	Predicted RBP	4.27	□□□□□ -1.73
TCA17	YEL048C	CAR1	P00812	333 aa	Known RBP	4.26	□□□□□ -1.73
TCA17	YEL048C	GDH1	P07262	454 aa	Known RBP	4.26	□□□□□ -1.73
TCA17	YEL048C	SYN8	P31377	255 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	SSE2	P32590	693 aa	Known RBP	4.26	□□□□□ -1.73
TCA17	YEL048C	YBR144C	P34215	104 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	NUP133	P36161	1157 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	YHR218W	P38899	603 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	YJL213W	P40896	331 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	LYS14	P40971	790 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	ALT2	P52892	507 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	YMR087W	Q04299	284 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	HUA2	Q12134	243 aa		4.26	□□□□□ -1.73
TCA17	YEL048C	APE1	P14904	514 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	SGF29	P25554	259 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	CHS3	P29465	1165 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	YBR139W	P38109	508 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	YBP1	P38315	674 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	OSH3	P38713	996 aa	Known RBP	4.25	□□□□□ -1.73
TCA17	YEL048C	RPH1	P39956	796 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	YFR016C	P43597	1233 aa	Known RBP	4.25	□□□□□ -1.73
TCA17	YEL048C	YDL186W	P48568	277 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	ERP1	Q05359	219 aa	Known RBP	4.25	□□□□□ -1.73
TCA17	YEL048C	FMP40	Q08968	688 aa	Predicted RBP	4.25	□□□□□ -1.73
TCA17	YEL048C	YBR126W-A	Q8TGU7	68 aa		4.25	□□□□□ -1.73
TCA17	YEL048C	RPL19A	P0CX82	189 aa	Known RBP	4.24	□□□□□ -1.73
TCA17	YEL048C	RPL19B	P0CX83	189 aa	Predicted RBP	4.24	□□□□□ -1.73
TCA17	YEL048C	YCK1	P23291	538 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	POL4	P25615	582 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	UBP11	P36026	717 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	CIN4	P39110	191 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	DSD1	P53095	428 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	YDL057W	Q07379	328 aa		4.24	□□□□□ -1.73
TCA17	YEL048C	SPC110	P32380	944 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	VPS52	P39904	641 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	NPR2	P39923	615 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	YEL068C	P39977	110 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	RPR2	P40571	144 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	YJL132W	P47014	750 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	APT1	P49435	187 aa	Known RBP	4.23	□□□□□ -1.73
TCA17	YEL048C	LCL3	P53153	274 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	BUD32	P53323	261 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	MEP3	P53390	489 aa		4.23	□□□□□ -1.73
TCA17	YEL048C	MCK1	P21965	375 aa	Known RBP	4.22	□□□□□ -1.73
TCA17	YEL048C	ATS1	P31386	333 aa		4.22	□□□□□ -1.73
TCA17	YEL048C	LOS1	P33418	1100 aa	Predicted RBP	4.22	□□□□□ -1.73
TCA17	YEL048C	MSC1	Q03104	513 aa		4.22	□□□□□ -1.73
TCA17	YEL048C	RSA1	Q08932	381 aa		4.22	□□□□□ -1.73
TCA17	YEL048C	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
TCA17	YEL048C	NOP58	Q12499	511 aa	Known RBP	4.22	□□□□□ -1.73
TCA17	YEL048C	CDC16	P09798	840 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	RPL20A	P0CX23	172 aa	Known RBP	4.21	□□□□□ -1.74
TCA17	YEL048C	RPL20B	P0CX24	172 aa	Predicted RBP	4.21	□□□□□ -1.74
TCA17	YEL048C	CBS2	P14905	389 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	KAR3	P17119	729 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	AGA1	P32323	725 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	MCM10	P32354	571 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	MTC4	P38335	694 aa	Known RBP	4.21	□□□□□ -1.74
TCA17	YEL048C	YJR154W	P47181	346 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	SYO1	Q07395	620 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	YDL009C	Q12210	107 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	AYT1	Q12226	474 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	SPE4	Q12455	300 aa		4.21	□□□□□ -1.74
TCA17	YEL048C	NOP1	P15646	327 aa	Known RBP	4.2	□□□□□ -1.74
TCA17	YEL048C	SGV1	P23293	657 aa	Known RBP	4.2	□□□□□ -1.74
TCA17	YEL048C	YOX1	P34161	385 aa		4.2	□□□□□ -1.74
TCA17	YEL048C	YHR210C	P38893	341 aa		4.2	□□□□□ -1.74
TCA17	YEL048C	COS10	P52924	374 aa		4.2	□□□□□ -1.74
TCA17	YEL048C	DUO1	P53168	247 aa	Known RBP	4.2	□□□□□ -1.74
TCA17	YEL048C	RLI1	Q03195	608 aa	Known RBP	4.2	□□□□□ -1.74
TCA17	YEL048C	MRPL51	Q06090	140 aa	Predicted RBP	4.2	□□□□□ -1.74
TCA17	YEL048C	EST1	P17214	699 aa	Predicted RBP	4.19	□□□□□ -1.74
TCA17	YEL048C	ART10	P18634	518 aa	Known RBP	4.19	□□□□□ -1.74
TCA17	YEL048C	SEF1	P34228	1148 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	SDS24	P38314	527 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TCA17	YEL048C	VID30	P53076	958 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	IPI3	P53877	555 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	IVY1	Q04934	453 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
TCA17	YEL048C	SGS1	P35187	1447 aa		4.19	□□□□□ -1.74
TCA17	YEL048C	AMD1	P15274	810 aa	Known RBP	4.18	□□□□□ -1.74
TCA17	YEL048C	MUD2	P36084	527 aa	Known RBP	4.18	□□□□□ -1.74
TCA17	YEL048C	ALG5	P40350	334 aa		4.18	□□□□□ -1.74
TCA17	YEL048C	BOR1	P53838	576 aa		4.18	□□□□□ -1.74
TCA17	YEL048C	SLD5	Q03406	294 aa		4.18	□□□□□ -1.74
TCA17	YEL048C	YLL056C	Q12177	298 aa		4.18	□□□□□ -1.74
TCA17	YEL048C	LSP1	Q12230	341 aa	Known RBP	4.18	□□□□□ -1.74
TCA17	YEL048C	HSH49	Q99181	213 aa	Predicted RBP	4.18	□□□□□ -1.74
TCA17	YEL048C	SEC53	P07283	254 aa	Known RBP	4.17	□□□□□ -1.74
TCA17	YEL048C	MRP13	P12686	339 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	EXO70	P19658	623 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	YCR007C	P25354	239 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	SAC6	P32599	642 aa	Known RBP	4.17	□□□□□ -1.74
TCA17	YEL048C	FRE1	P32791	686 aa		4.17	□□□□□ -1.74
TCA17	YEL048C	PMU1	P36069	295 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms