RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	NUP1	P20676	1076 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	ELO2	P25358	347 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	GAC1	P28006	793 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	MGM1	P32266	881 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	PUP2	P32379	260 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	RML2	P32611	393 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	MIA40	P36046	403 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	THI2	P38141	450 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	EFM4	P40516	257 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	VMA13	P41807	478 aa	Known RBP	3.11	□□□□□ -1.91
PEX5	YDR244W	RPS10B	P46784	105 aa	Known RBP	3.11	□□□□□ -1.91
PEX5	YDR244W	NET1	P47035	1189 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	AIM22	P47051	409 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	YGR126W	P53274	230 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	MEH1	Q02205	184 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	YDR286C	Q05530	114 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	ATG26	Q06321	1198 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	TPO3	Q06451	622 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	FRE3	Q08905	711 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	SPE3	Q12074	293 aa	Known RBP	3.11	□□□□□ -1.91
PEX5	YDR244W	PNS1	Q12412	539 aa		3.11	□□□□□ -1.91
PEX5	YDR244W	PUT2	P07275	575 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	RRP7	P25368	297 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	LYS20	P48570	428 aa	Known RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	CUL3	P53202	744 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	TOF2	Q02208	771 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	YMR160W	Q03823	816 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	TAP42	Q04372	366 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	RRP45	Q05636	305 aa	Known RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	ADE13	Q05911	482 aa	Known RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	YDL057W	Q07379	328 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	SIL1	Q08199	421 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	SLK19	Q08581	821 aa	Known RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	SMF3	Q12078	473 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX5	YDR244W	YLR111W	Q12528	110 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	RAV1	P47104	1357 aa		3.1	□□□□□ -1.91
PEX5	YDR244W	SNT1	P25357	1226 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	SPB1	P25582	841 aa	Predicted RBP	3.09	□□□□□ -1.91
PEX5	YDR244W	ADY2	P25613	283 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	IDH2	P28241	369 aa	Known RBP	3.09	□□□□□ -1.91
PEX5	YDR244W	RPN2	P32565	945 aa	Known RBP	3.09	□□□□□ -1.91
PEX5	YDR244W	RPS0A	P32905	252 aa	Known RBP	3.09	□□□□□ -1.91
PEX5	YDR244W	SLM4	P38247	162 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	NTC20	P38302	140 aa	Predicted RBP	3.09	□□□□□ -1.91
PEX5	YDR244W	ARN1	P38731	627 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	YHR054C	P38780	354 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	YJL107C	P42947	387 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	TAX4	P47030	604 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	YGL138C	P53122	345 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	YGR111W	P53265	400 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	DUG3	P53871	357 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	ASI1	P54074	624 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	RSF1	Q05043	376 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	PIG1	Q06216	648 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	PGC1	Q08959	321 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	SUT2	Q12286	268 aa		3.09	□□□□□ -1.91
PEX5	YDR244W	SRV2	P17555	526 aa	Known RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	KRR1	P25586	316 aa	Predicted RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	RAD14	P28519	371 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	YIM1	P28625	365 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	NIP100	P33420	868 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	LTV1	P34078	463 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	MTR2	P34232	184 aa	Known RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	HOT13	P36078	116 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	STV1	P37296	890 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	ALK1	P43633	760 aa	Known RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	URB2	P47108	1174 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	YGR149W	P48236	432 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	BPL1	P48445	690 aa	Predicted RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	UBP8	P50102	471 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	FMS1	P50264	508 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	HOT1	Q03213	719 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	SWF1	Q04629	336 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	HEL2	Q05580	639 aa	Known RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	PFA4	Q12006	378 aa		3.09	□□□□□ -1.92
PEX5	YDR244W	CFT2	Q12102	859 aa	Predicted RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	RPN5	Q12250	445 aa	Known RBP	3.09	□□□□□ -1.92
PEX5	YDR244W	COR1	P07256	457 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	SPS4	P09937	338 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	PRP2	P20095	876 aa	Predicted RBP	3.08	□□□□□ -1.92
PEX5	YDR244W	AFG1	P32317	509 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	ARA1	P38115	344 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	RIX1	P38883	763 aa	Predicted RBP	3.08	□□□□□ -1.92
PEX5	YDR244W	MBB1	P39534	108 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	ULP2	P40537	1034 aa	Predicted RBP	3.08	□□□□□ -1.92
PEX5	YDR244W	SNG1	P46950	547 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	ATG27	P46989	271 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	PYK2	P52489	506 aa	Known RBP	3.08	□□□□□ -1.92
PEX5	YDR244W	YNL144C	P53907	740 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	EOS1	P53938	366 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	SKO1	Q02100	647 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	THP1	Q08231	455 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	CUE5	Q08412	411 aa	Known RBP	3.08	□□□□□ -1.92
PEX5	YDR244W	DCI1	Q08558	271 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	VPS54	Q12071	889 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	NFI1	Q12216	726 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	FRE6	Q12473	712 aa		3.08	□□□□□ -1.92
PEX5	YDR244W	HIP1	P06775	603 aa		3.07	□□□□□ -1.92
PEX5	YDR244W	CBP1	P07252	654 aa		3.07	□□□□□ -1.92
PEX5	YDR244W	SNF3	P10870	884 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms