RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W GPD1Q00055 391 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W EFR3Q03653 782 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W SNU56Q03782 492 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W LRS4Q04087 347 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W ECM18Q04623 453 aa3.63□□□□□ -1.83
LCB5YLR260W HRQ1Q05549 1077 aa3.63□□□□□ -1.83
LCB5YLR260W ECM7Q06200 448 aa3.63□□□□□ -1.83
LCB5YLR260W ENT4Q07872 247 aa3.63□□□□□ -1.83
LCB5YLR260W YPL216WQ08964 1102 aa3.63□□□□□ -1.83
LCB5YLR260W PKH2Q12236 1081 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W PFK27Q12471 397 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W YBR182C-AQ8TGU6 64 aa3.63□□□□□ -1.83
LCB5YLR260W AI3P03877 415 aa3.63□□□□□ -1.83
LCB5YLR260W YCR051WP25631 222 aa3.63□□□□□ -1.83
LCB5YLR260W ERV1P27882 189 aa3.63□□□□□ -1.83
LCB5YLR260W PRR1P28708 518 aa3.63□□□□□ -1.83
LCB5YLR260W DGR2P32330 852 aa3.63□□□□□ -1.83
LCB5YLR260W SRP101P32916 621 aa3.63□□□□□ -1.83
LCB5YLR260W CBF5P33322 483 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
LCB5YLR260W MMS4P38257 691 aa3.63□□□□□ -1.83
LCB5YLR260W YSW1P38280 609 aa3.63□□□□□ -1.83
LCB5YLR260W TSL1P38427 1098 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W YHR054CP38780 354 aa3.63□□□□□ -1.83
LCB5YLR260W YAR028WP39548 234 aa3.63□□□□□ -1.83
LCB5YLR260W FLC2P39719 783 aa3.63□□□□□ -1.83
LCB5YLR260W YTA12P40341 825 aa3.63□□□□□ -1.83
LCB5YLR260W OYE3P41816 400 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W NBP1P52919 319 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W NOP15P53927 220 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W ABZ2Q03266 374 aa3.63□□□□□ -1.83
LCB5YLR260W SHS1Q07657 551 aa3.63□□□□□ -1.83
LCB5YLR260W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
LCB5YLR260W RCN2Q12044 265 aa3.63□□□□□ -1.83
LCB5YLR260W COX17Q12287 69 aa3.63□□□□□ -1.83
LCB5YLR260W CAR2P07991 424 aaKnown RBP3.62□□□□□ -1.83
LCB5YLR260W EST1P17214 699 aaPredicted RBP3.62□□□□□ -1.83
LCB5YLR260W DAP2P18962 818 aa3.62□□□□□ -1.83
LCB5YLR260W SPO11P23179 398 aa3.62□□□□□ -1.83
LCB5YLR260W CPR2P23285 205 aa3.62□□□□□ -1.83
LCB5YLR260W VPS3P23643 1011 aa3.62□□□□□ -1.83
LCB5YLR260W MRP20P32387 263 aa3.62□□□□□ -1.83
LCB5YLR260W LTV1P34078 463 aa3.62□□□□□ -1.83
LCB5YLR260W SRB2P34162 210 aa3.62□□□□□ -1.83
LCB5YLR260W MRPL7P36519 292 aa3.62□□□□□ -1.83
LCB5YLR260W ATG14P38270 344 aa3.62□□□□□ -1.83
LCB5YLR260W EFM2P38347 419 aa3.62□□□□□ -1.83
LCB5YLR260W UBP5P39944 805 aa3.62□□□□□ -1.83
LCB5YLR260W YIR014WP40570 242 aa3.62□□□□□ -1.83
LCB5YLR260W ALT2P52892 507 aa3.62□□□□□ -1.83
LCB5YLR260W CUE3P53137 624 aaKnown RBP3.62□□□□□ -1.83
LCB5YLR260W RTC4P53850 401 aa3.62□□□□□ -1.83
LCB5YLR260W YNL247WP53852 767 aaKnown RBP3.62□□□□□ -1.83
LCB5YLR260W RAD30Q04049 632 aa3.62□□□□□ -1.83
LCB5YLR260W CDD1Q06549 142 aa3.62□□□□□ -1.83
LCB5YLR260W YPL277CQ08989 487 aa3.62□□□□□ -1.83
LCB5YLR260W VPS54Q12071 889 aa3.62□□□□□ -1.83
LCB5YLR260W DIN7Q12086 430 aa3.62□□□□□ -1.83
LCB5YLR260W PPZ1P26570 692 aa3.61□□□□□ -1.83
LCB5YLR260W RPT5P33297 434 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W SIC1P38634 284 aa3.61□□□□□ -1.83
LCB5YLR260W MET18P40469 1032 aa3.61□□□□□ -1.83
LCB5YLR260W PXA1P41909 870 aa3.61□□□□□ -1.83
LCB5YLR260W PRY1P47032 299 aa3.61□□□□□ -1.83
LCB5YLR260W YJL045WP47052 634 aa3.61□□□□□ -1.83
LCB5YLR260W ASN1P49089 572 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W PAN2P53010 1115 aaPredicted RBP3.61□□□□□ -1.83
LCB5YLR260W DSL1P53847 754 aa3.61□□□□□ -1.83
LCB5YLR260W ALG11P53954 548 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W CRR1Q05790 422 aa3.61□□□□□ -1.83
LCB5YLR260W MRI1Q06489 411 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W ARR2Q06597 130 aa3.61□□□□□ -1.83
LCB5YLR260W YOL075CQ08234 1294 aa3.61□□□□□ -1.83
LCB5YLR260W OSW2Q12202 724 aa3.61□□□□□ -1.83
LCB5YLR260W YDR215CQ12240 137 aa3.61□□□□□ -1.83
LCB5YLR260W AFI1Q99222 893 aa3.61□□□□□ -1.83
LCB5YLR260W CET1O13297 549 aaPredicted RBP3.61□□□□□ -1.83
LCB5YLR260W YLR302CO13544 120 aa3.61□□□□□ -1.83
LCB5YLR260W PCT1P13259 424 aa3.61□□□□□ -1.83
LCB5YLR260W CDC15P27636 974 aa3.61□□□□□ -1.83
LCB5YLR260W BMH1P29311 267 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W SYN8P31377 255 aa3.61□□□□□ -1.83
LCB5YLR260W MF(ALPHA)2P32435 120 aa3.61□□□□□ -1.83
LCB5YLR260W YKL097CP34245 136 aa3.61□□□□□ -1.83
LCB5YLR260W UBP13P38187 747 aa3.61□□□□□ -1.83
LCB5YLR260W YBL029WP38201 376 aa3.61□□□□□ -1.83
LCB5YLR260W SAF1P38352 637 aa3.61□□□□□ -1.83
LCB5YLR260W PFK26P40433 827 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W TRF5P48561 642 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W MNT2P53059 558 aa3.61□□□□□ -1.83
LCB5YLR260W EFM5P53200 248 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W YNR071CP53757 342 aa3.61□□□□□ -1.83
LCB5YLR260W ARP4P80428 489 aa3.61□□□□□ -1.83
LCB5YLR260W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
LCB5YLR260W ARX1Q03862 593 aaKnown RBP3.61□□□□□ -1.83
LCB5YLR260W ROY1Q04847 553 aa3.61□□□□□ -1.83
LCB5YLR260W PIG1Q06216 648 aa3.61□□□□□ -1.83
LCB5YLR260W CUR1Q06469 252 aa3.61□□□□□ -1.83
LCB5YLR260W RSB1Q08417 382 aa3.61□□□□□ -1.83
LCB5YLR260W TCO89Q08921 799 aa3.61□□□□□ -1.83
LCB5YLR260W HMI1Q12039 706 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms