RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W PHD1P36093 366 aa2.83□□□□□ -1.96
SSF1YHR066W SPC34P36131 295 aa2.83□□□□□ -1.96
SSF1YHR066W DBP8P38719 431 aa2.83□□□□□ -1.96
SSF1YHR066W BZZ1P38822 633 aa2.83□□□□□ -1.96
SSF1YHR066W YIR014WP40570 242 aa2.83□□□□□ -1.96
SSF1YHR066W ERG26P53199 349 aaKnown RBP2.83□□□□□ -1.96
SSF1YHR066W CUL3P53202 744 aa2.83□□□□□ -1.96
SSF1YHR066W EFM6P53970 246 aa2.83□□□□□ -1.96
SSF1YHR066W RSM23Q01163 450 aa2.83□□□□□ -1.96
SSF1YHR066W YDR415CQ04033 374 aaPredicted RBP2.83□□□□□ -1.96
SSF1YHR066W DPB4Q04603 196 aaKnown RBP2.83□□□□□ -1.96
SSF1YHR066W YMR317WQ04893 1140 aa2.83□□□□□ -1.96
SSF1YHR066W TEN1Q07921 160 aa2.83□□□□□ -1.96
SSF1YHR066W CSR2Q12734 1121 aa2.83□□□□□ -1.96
SSF1YHR066W SWR1Q05471 1514 aa2.82□□□□□ -1.96
SSF1YHR066W ARG81P05085 880 aa2.82□□□□□ -1.96
SSF1YHR066W ARD1P07347 238 aaPredicted RBP2.82□□□□□ -1.96
SSF1YHR066W PRE8P23639 250 aa2.82□□□□□ -1.96
SSF1YHR066W POL4P25615 582 aa2.82□□□□□ -1.96
SSF1YHR066W MCM4P30665 933 aaKnown RBP2.82□□□□□ -1.96
SSF1YHR066W MTR2P34232 184 aaKnown RBP2.82□□□□□ -1.96
SSF1YHR066W AGP2P38090 596 aa2.82□□□□□ -1.96
SSF1YHR066W RTT107P38850 1070 aa2.82□□□□□ -1.96
SSF1YHR066W AZF1P41696 914 aa2.82□□□□□ -1.96
SSF1YHR066W LCL3P53153 274 aa2.82□□□□□ -1.96
SSF1YHR066W SUB1P54000 292 aaKnown RBP2.82□□□□□ -1.96
SSF1YHR066W MSC1Q03104 513 aa2.82□□□□□ -1.96
SSF1YHR066W NGL3Q03210 505 aa2.82□□□□□ -1.96
SSF1YHR066W ECM30Q06673 1274 aa2.82□□□□□ -1.96
SSF1YHR066W YDR056CQ12025 205 aa2.82□□□□□ -1.96
SSF1YHR066W SGV1P23293 657 aaKnown RBP2.81□□□□□ -1.96
SSF1YHR066W PUP3P25451 205 aaKnown RBP2.81□□□□□ -1.96
SSF1YHR066W ERG1P32476 496 aaKnown RBP2.81□□□□□ -1.96
SSF1YHR066W PAH1P32567 862 aa2.81□□□□□ -1.96
SSF1YHR066W NUP133P36161 1157 aa2.81□□□□□ -1.96
SSF1YHR066W RIM2P38127 377 aa2.81□□□□□ -1.96
SSF1YHR066W ROT2P38138 954 aa2.81□□□□□ -1.96
SSF1YHR066W DUO1P53168 247 aaKnown RBP2.81□□□□□ -1.96
SSF1YHR066W YMR230W-AQ3E7B5 62 aa2.81□□□□□ -1.96
SSF1YHR066W YBR126W-AQ8TGU7 68 aa2.81□□□□□ -1.96
SSF1YHR066W BUD5P25300 642 aaPredicted RBP2.8□□□□□ -1.96
SSF1YHR066W ACH1P32316 526 aa2.8□□□□□ -1.96
SSF1YHR066W TRS65P32893 560 aa2.8□□□□□ -1.96
SSF1YHR066W YBL055CP34220 418 aaPredicted RBP2.8□□□□□ -1.96
SSF1YHR066W APT1P49435 187 aaKnown RBP2.8□□□□□ -1.96
SSF1YHR066W YGL260WP53056 76 aa2.8□□□□□ -1.96
SSF1YHR066W YVH1Q02256 364 aaKnown RBP2.8□□□□□ -1.96
SSF1YHR066W YML037CQ03703 340 aa2.8□□□□□ -1.96
SSF1YHR066W DIC1Q06143 298 aa2.8□□□□□ -1.96
SSF1YHR066W LUC7Q07508 261 aaPredicted RBP2.8□□□□□ -1.96
SSF1YHR066W FMP45Q07651 309 aa2.8□□□□□ -1.96
SSF1YHR066W ETT1Q08421 412 aaKnown RBP2.8□□□□□ -1.96
SSF1YHR066W BUD21Q08492 214 aaPredicted RBP2.8□□□□□ -1.96
SSF1YHR066W MF(ALPHA)1P01149 165 aa2.79□□□□□ -1.96
SSF1YHR066W MRS3P10566 314 aa2.79□□□□□ -1.96
SSF1YHR066W SAN1P22470 610 aa2.79□□□□□ -1.96
SSF1YHR066W IMG1P25626 169 aa2.79□□□□□ -1.96
SSF1YHR066W YIH1P25637 258 aa2.79□□□□□ -1.96
SSF1YHR066W CMK1P27466 446 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W SNC1P31109 117 aa2.79□□□□□ -1.96
SSF1YHR066W SSE2P32590 693 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W YKL100CP34248 587 aa2.79□□□□□ -1.96
SSF1YHR066W MIC60P36112 540 aa2.79□□□□□ -1.96
SSF1YHR066W FMP46P36141 133 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W YBL029WP38201 376 aa2.79□□□□□ -1.96
SSF1YHR066W LAG1P38703 411 aa2.79□□□□□ -1.96
SSF1YHR066W CCT6P39079 546 aa2.79□□□□□ -1.96
SSF1YHR066W YJL070CP40361 888 aa2.79□□□□□ -1.96
SSF1YHR066W AXL1P40851 1208 aa2.79□□□□□ -1.96
SSF1YHR066W UPF3P48412 387 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W SMM1P53720 384 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W TDA7P53882 636 aaPredicted RBP2.79□□□□□ -1.96
SSF1YHR066W YPL014WQ02606 381 aa2.79□□□□□ -1.96
SSF1YHR066W VPS72Q03388 795 aa2.79□□□□□ -1.96
SSF1YHR066W MSS11Q03825 758 aa2.79□□□□□ -1.96
SSF1YHR066W YMR087WQ04299 284 aa2.79□□□□□ -1.96
SSF1YHR066W BUD22Q04347 519 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W RBA50Q04418 439 aa2.79□□□□□ -1.96
SSF1YHR066W SSK1Q07084 712 aa2.79□□□□□ -1.96
SSF1YHR066W DAP1Q12091 152 aa2.79□□□□□ -1.96
SSF1YHR066W NCE102Q12207 173 aaRIP-Chip data2.79□□□□□ -1.96not detected
SSF1YHR066W PDH1Q12428 516 aaKnown RBP2.79□□□□□ -1.96
SSF1YHR066W ARP6Q12509 438 aa2.79□□□□□ -1.96
SSF1YHR066W AAC3P18238 307 aa2.78□□□□□ -1.96
SSF1YHR066W TYR1P20049 452 aa2.78□□□□□ -1.96
SSF1YHR066W YBR144CP34215 104 aa2.78□□□□□ -1.96
SSF1YHR066W NOP16P40007 231 aaKnown RBP2.78□□□□□ -1.96
SSF1YHR066W PTR3P43606 678 aa2.78□□□□□ -1.96
SSF1YHR066W FAR3P46671 204 aa2.78□□□□□ -1.96
SSF1YHR066W YMR160WQ03823 816 aa2.78□□□□□ -1.96
SSF1YHR066W RPC11Q04307 110 aaPredicted RBP2.78□□□□□ -1.96
SSF1YHR066W THI20Q08224 551 aa2.78□□□□□ -1.96
SSF1YHR066W NMD4Q12129 218 aa2.78□□□□□ -1.96
SSF1YHR066W NOP58Q12499 511 aaKnown RBP2.78□□□□□ -1.96
SSF1YHR066W TY1B-DR4Q07793 1604 aa2.78□□□□□ -1.96
SSF1YHR066W SEM1O94742 89 aa2.77□□□□□ -1.97
SSF1YHR066W PHO2P07269 559 aa2.77□□□□□ -1.97
SSF1YHR066W MRP13P12686 339 aa2.77□□□□□ -1.97
SSF1YHR066W PMS1P14242 873 aa2.77□□□□□ -1.97
SSF1YHR066W BOS1P25385 244 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms