RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YNR071CP53757 342 aa5.64□□□□□ -1.51
PDB1YBR221C PET117Q02771 107 aa5.64□□□□□ -1.51
PDB1YBR221C FMP30Q02883 468 aa5.64□□□□□ -1.51
PDB1YBR221C YMR102CQ03177 834 aa5.64□□□□□ -1.51
PDB1YBR221C RPN9Q04062 393 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C DSE3Q08729 430 aa5.64□□□□□ -1.51
PDB1YBR221C UAF30Q08747 228 aa5.64□□□□□ -1.51
PDB1YBR221C GPB1Q08886 897 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-GR1Q12085 440 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C YBR182C-AQ8TGU6 64 aa5.64□□□□□ -1.51
PDB1YBR221C TY1A-OLQ92392 440 aaKnown RBP5.64□□□□□ -1.51
PDB1YBR221C TOR2P32600 2474 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C VPS63O13549 108 aa5.63□□□□□ -1.51
PDB1YBR221C RPS17AP02407 136 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C TEF1P02994 458 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C ARG81P05085 880 aa5.63□□□□□ -1.51
PDB1YBR221C RPS31P05759 152 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C PET494P07390 489 aaPredicted RBP5.63□□□□□ -1.51
PDB1YBR221C RPS17BP14127 136 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C PET18P25362 215 aa5.63□□□□□ -1.51
PDB1YBR221C YBL055CP34220 418 aaPredicted RBP5.63□□□□□ -1.51
PDB1YBR221C KES1P35844 434 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C NUP133P36161 1157 aa5.63□□□□□ -1.51
PDB1YBR221C BEM4P39011 633 aa5.63□□□□□ -1.51
PDB1YBR221C GPB2P39717 880 aa5.63□□□□□ -1.51
PDB1YBR221C SCC4P40090 624 aa5.63□□□□□ -1.51
PDB1YBR221C SHQ1P40486 507 aaPredicted RBP5.63□□□□□ -1.51
PDB1YBR221C SHR5P41912 237 aa5.63□□□□□ -1.51
PDB1YBR221C EFM3P47163 339 aa5.63□□□□□ -1.51
PDB1YBR221C RMD9P53140 646 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C CUS1Q02554 436 aaPredicted RBP5.63□□□□□ -1.51
PDB1YBR221C ATG21Q02887 496 aa5.63□□□□□ -1.51
PDB1YBR221C RLI1Q03195 608 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C RSM28Q03430 361 aa5.63□□□□□ -1.51
PDB1YBR221C ECM11Q04110 302 aa5.63□□□□□ -1.51
PDB1YBR221C RQC1Q05468 723 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C FUS2Q05670 677 aa5.63□□□□□ -1.51
PDB1YBR221C CRR1Q05790 422 aa5.63□□□□□ -1.51
PDB1YBR221C ATG29Q12092 213 aa5.63□□□□□ -1.51
PDB1YBR221C RIO1Q12196 484 aaKnown RBP5.63□□□□□ -1.51
PDB1YBR221C YOL107WQ12239 342 aa5.63□□□□□ -1.51
PDB1YBR221C TOR1P35169 2470 aa5.63□□□□□ -1.51
PDB1YBR221C PMA1P05030 918 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C HTS1P07263 546 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C SSA3P09435 649 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C FUS1P11710 512 aa5.62□□□□□ -1.51
PDB1YBR221C SEN2P16658 377 aa5.62□□□□□ -1.51
PDB1YBR221C GDH2P33327 1092 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C YKL070WP36087 169 aa5.62□□□□□ -1.51
PDB1YBR221C MRPL4P36517 319 aa5.62□□□□□ -1.51
PDB1YBR221C SHM1P37292 490 aaPredicted RBP5.62□□□□□ -1.51
PDB1YBR221C TAE1P38340 232 aa5.62□□□□□ -1.51
PDB1YBR221C MPT5P39016 859 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51 RIP-Chip
PDB1YBR221C AFG3P39925 761 aa5.62□□□□□ -1.51
PDB1YBR221C SLZ1P40167 298 aa5.62□□□□□ -1.51
PDB1YBR221C OTU1P43558 301 aa5.62□□□□□ -1.51
PDB1YBR221C MRK1P50873 501 aa5.62□□□□□ -1.51
PDB1YBR221C PNC1P53184 216 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C PRM1P53835 661 aa5.62□□□□□ -1.51
PDB1YBR221C YNL134CP53912 376 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C YNL035CP53962 389 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C HDA1P53973 706 aa5.62□□□□□ -1.51
PDB1YBR221C HEF3P53978 1044 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C RPA49Q01080 415 aaPredicted RBP5.62□□□□□ -1.51
PDB1YBR221C LRS4Q04087 347 aaKnown RBP5.62□□□□□ -1.51
PDB1YBR221C IVY1Q04934 453 aa5.62□□□□□ -1.51
PDB1YBR221C RTT103Q05543 409 aa5.62□□□□□ -1.51
PDB1YBR221C HRQ1Q05549 1077 aa5.62□□□□□ -1.51
PDB1YBR221C YLR407WQ06070 228 aa5.62□□□□□ -1.51
PDB1YBR221C YEH1Q07804 573 aa5.62□□□□□ -1.51
PDB1YBR221C ICL2Q12031 575 aa5.62□□□□□ -1.51
PDB1YBR221C NUS1Q12063 375 aa5.62□□□□□ -1.51
PDB1YBR221C CDC37P06101 506 aaKnown RBP5.61□□□□□ -1.51
PDB1YBR221C TY2A-LR1P0C2J4 438 aa5.61□□□□□ -1.51
PDB1YBR221C TY2A-FP0CX61 438 aa5.61□□□□□ -1.51
PDB1YBR221C TY2A-GR2P0CX62 438 aa5.61□□□□□ -1.51
PDB1YBR221C CDC23P16522 626 aa5.61□□□□□ -1.51
PDB1YBR221C TY2A-CP25383 438 aa5.61□□□□□ -1.51
PDB1YBR221C YCL002CP25565 263 aa5.61□□□□□ -1.51
PDB1YBR221C GEX1P25596 615 aa5.61□□□□□ -1.51
PDB1YBR221C PRO1P32264 428 aa5.61□□□□□ -1.51
PDB1YBR221C NDI1P32340 513 aa5.61□□□□□ -1.51
PDB1YBR221C NTH1P32356 751 aa5.61□□□□□ -1.51
PDB1YBR221C SEC61P32915 480 aa5.61□□□□□ -1.51
PDB1YBR221C YPT7P32939 208 aa5.61□□□□□ -1.51
PDB1YBR221C BCK2P33306 851 aa5.61□□□□□ -1.51
PDB1YBR221C RRP1P35178 278 aaPredicted RBP5.61□□□□□ -1.51
PDB1YBR221C VAB2P40003 282 aa5.61□□□□□ -1.51
PDB1YBR221C ZRG8P40021 1076 aa5.61□□□□□ -1.51
PDB1YBR221C RPA34P47006 233 aaPredicted RBP5.61□□□□□ -1.51
PDB1YBR221C GTO1P48239 356 aa5.61□□□□□ -1.51
PDB1YBR221C SKP1P52286 194 aa5.61□□□□□ -1.51
PDB1YBR221C MIG2P53035 382 aa5.61□□□□□ -1.51
PDB1YBR221C RMR1P53060 241 aa5.61□□□□□ -1.51
PDB1YBR221C CSL4P53859 292 aaPredicted RBP5.61□□□□□ -1.51
PDB1YBR221C TY2A-DR2Q03483 438 aa5.61□□□□□ -1.51
PDB1YBR221C GIM5Q04493 163 aa5.61□□□□□ -1.51
PDB1YBR221C TRE1Q08919 783 aa5.61□□□□□ -1.51
PDB1YBR221C YPL260WQ08977 551 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms