RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W SWA2Q06677 668 aa1.06□□□□□ -2.24
PRP39YML046W CSR1Q06705 408 aaKnown RBP1.06□□□□□ -2.24
PRP39YML046W PEX15Q08215 383 aa1.06□□□□□ -2.24
PRP39YML046W ICL2Q12031 575 aa1.06□□□□□ -2.24
PRP39YML046W GCD7P32502 381 aaPredicted RBP1.05□□□□□ -2.24
PRP39YML046W NMD2P38798 1089 aaKnown RBP1.05□□□□□ -2.24
PRP39YML046W SAW1P39735 261 aa1.05□□□□□ -2.24
PRP39YML046W MRX1P40050 688 aa1.05□□□□□ -2.24
PRP39YML046W SCS2P40075 244 aaKnown RBP1.05□□□□□ -2.24
PRP39YML046W SHY1P53266 389 aa1.05□□□□□ -2.24
PRP39YML046W ATG23Q06671 453 aa1.05□□□□□ -2.24
PRP39YML046W TMS1Q12116 473 aa1.05□□□□□ -2.24
PRP39YML046W SEC62P21825 274 aa1.05□□□□□ -2.24
PRP39YML046W PHO3P24031 467 aa1.05□□□□□ -2.24
PRP39YML046W FUN19P28003 413 aaPredicted RBP1.05□□□□□ -2.24
PRP39YML046W BUD16P39988 312 aa1.05□□□□□ -2.24
PRP39YML046W SOL4P53315 255 aa1.05□□□□□ -2.24
PRP39YML046W ENT4Q07872 247 aa1.05□□□□□ -2.24
PRP39YML046W RDR1Q08904 546 aa1.05□□□□□ -2.24
PRP39YML046W YGR161W-CQ3E744 92 aa1.05□□□□□ -2.24
PRP39YML046W RPA190P10964 1664 aaKnown RBP1.05□□□□□ -2.24
PRP39YML046W YBR056W-AI2HB52 66 aa1.04□□□□□ -2.24
PRP39YML046W PMU1P36069 295 aa1.04□□□□□ -2.24
PRP39YML046W NIT2P47016 307 aa1.04□□□□□ -2.24
PRP39YML046W ARK1P53974 638 aa1.04□□□□□ -2.24
PRP39YML046W MTG1Q03151 367 aaPredicted RBP1.04□□□□□ -2.24
PRP39YML046W NTE1Q04958 1679 aa1.04□□□□□ -2.24
PRP39YML046W CIA1Q05583 330 aa1.04□□□□□ -2.24
PRP39YML046W VAM6Q07468 1049 aa1.04□□□□□ -2.24
PRP39YML046W TRE2Q08693 809 aa1.04□□□□□ -2.24
PRP39YML046W NUR1Q12066 484 aa1.04□□□□□ -2.24
PRP39YML046W HHF1P02309 103 aaKnown RBP1.03□□□□□ -2.24
PRP39YML046W ATR1P13090 542 aa1.03□□□□□ -2.24
PRP39YML046W VPS17P32913 551 aa1.03□□□□□ -2.24
PRP39YML046W ECM15P35195 104 aa1.03□□□□□ -2.24
PRP39YML046W NPR2P39923 615 aa1.03□□□□□ -2.24
PRP39YML046W SNG1P46950 547 aa1.03□□□□□ -2.24
PRP39YML046W HAL1Q01766 294 aa1.03□□□□□ -2.24
PRP39YML046W ELP3Q02908 557 aaKnown RBP1.03□□□□□ -2.24
PRP39YML046W PDH1Q12428 516 aaKnown RBP1.03□□□□□ -2.24
PRP39YML046W ESC1Q03661 1658 aaKnown RBP1.03□□□□□ -2.24
PRP39YML046W HIR3P47171 1648 aa1.03□□□□□ -2.24
PRP39YML046W GEA2P39993 1459 aaKnown RBP1.03□□□□□ -2.24
PRP39YML046W YTA7P40340 1379 aa1.03□□□□□ -2.24
PRP39YML046W SRP54P20424 541 aaKnown RBP1.03□□□□□ -2.25
PRP39YML046W PCL1P24867 279 aa1.03□□□□□ -2.25
PRP39YML046W BMT2P38278 337 aa1.03□□□□□ -2.25
PRP39YML046W CAB2P40506 365 aa1.03□□□□□ -2.25
PRP39YML046W TAM41P53230 385 aa1.03□□□□□ -2.25
PRP39YML046W TSA2Q04120 196 aa1.03□□□□□ -2.25
PRP39YML046W YMR027WQ04371 470 aa1.03□□□□□ -2.25
PRP39YML046W VPS13Q07878 3144 aa1.02□□□□□ -2.25
PRP39YML046W RVS161P25343 265 aaKnown RBP1.02□□□□□ -2.25
PRP39YML046W LRE1P25579 583 aaKnown RBP1.02□□□□□ -2.25
PRP39YML046W ARO2P28777 376 aaKnown RBP1.02□□□□□ -2.25
PRP39YML046W HEM12P32347 362 aaPredicted RBP1.02□□□□□ -2.25
PRP39YML046W SOF1P33750 489 aaKnown RBP1.02□□□□□ -2.25
PRP39YML046W MIA40P36046 403 aa1.02□□□□□ -2.25
PRP39YML046W IMA5P40884 581 aa1.02□□□□□ -2.25
PRP39YML046W SAM50P53969 484 aa1.02□□□□□ -2.25
PRP39YML046W ERV2Q12284 196 aa1.02□□□□□ -2.25
PRP39YML046W CDC25P04821 1589 aa1.02□□□□□ -2.25
PRP39YML046W DNF2Q12675 1612 aa1.01□□□□□ -2.25
PRP39YML046W YML003WP0CF16 290 aa1.01□□□□□ -2.25
PRP39YML046W CMK1P27466 446 aaKnown RBP1.01□□□□□ -2.25
PRP39YML046W CBF2P32504 956 aa1.01□□□□□ -2.25
PRP39YML046W YMR087WQ04299 284 aa1.01□□□□□ -2.25
PRP39YML046W PBA1Q05778 276 aa1.01□□□□□ -2.25
PRP39YML046W THI20Q08224 551 aa1.01□□□□□ -2.25
PRP39YML046W YPS3Q12303 508 aa1.01□□□□□ -2.25
PRP39YML046W PET122P10355 254 aa1.01□□□□□ -2.25
PRP39YML046W SWD1P39706 426 aa1.01□□□□□ -2.25
PRP39YML046W YJR142WP47173 342 aa1.01□□□□□ -2.25
PRP39YML046W SLX4Q12098 748 aa1.01□□□□□ -2.25
PRP39YML046W ADH2P00331 348 aaKnown RBP1□□□□□ -2.25
PRP39YML046W ADH4P10127 382 aa1□□□□□ -2.25
PRP39YML046W RRN11Q04712 507 aa1□□□□□ -2.25
PRP39YML046W PHM6Q05637 104 aa1□□□□□ -2.25
PRP39YML046W PUS4P48567 403 aaKnown RBP0.99□□□□□ -2.25
PRP39YML046W NNF2P53253 936 aa0.99□□□□□ -2.25
PRP39YML046W ATG26Q06321 1198 aa0.99□□□□□ -2.25
PRP39YML046W SSK1Q07084 712 aa0.99□□□□□ -2.25
PRP39YML046W MET5P47169 1442 aa0.99□□□□□ -2.25
PRP39YML046W BPT1P14772 1559 aa0.99□□□□□ -2.25
PRP39YML046W RPO31P04051 1460 aa0.99□□□□□ -2.25
PRP39YML046W PUT3P25502 979 aaPredicted RBP0.99□□□□□ -2.25
PRP39YML046W AAP1P37898 856 aaKnown RBP0.99□□□□□ -2.25
PRP39YML046W ECM10P39987 644 aa0.99□□□□□ -2.25
PRP39YML046W YIL161WP40449 235 aaKnown RBP0.99□□□□□ -2.25
PRP39YML046W SWT1Q12104 458 aa0.99□□□□□ -2.25
PRP39YML046W YBL111CQ3E7Y5 667 aa0.99□□□□□ -2.25
PRP39YML046W THO2P53552 1597 aaKnown RBP0.99□□□□□ -2.25
PRP39YML046W TAF2P23255 1407 aa0.98□□□□□ -2.25
PRP39YML046W CAR1P00812 333 aaKnown RBP0.98□□□□□ -2.25
PRP39YML046W SNC1P31109 117 aa0.98□□□□□ -2.25
PRP39YML046W MCM3P24279 971 aaKnown RBP0.97□□□□□ -2.25
PRP39YML046W PAH1P32567 862 aa0.97□□□□□ -2.25
PRP39YML046W FRD1P32614 470 aaKnown RBP0.97□□□□□ -2.25
PRP39YML046W NUP120P35729 1037 aa0.97□□□□□ -2.25
PRP39YML046W VPS52P39904 641 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms