RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	AFG3	P39925	761 aa		4.04	□□□□□ -1.76
SPI1	YER150W	DLD3	P39976	496 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	ELP2	P42935	788 aa		4.04	□□□□□ -1.76
SPI1	YER150W	OTU1	P43558	301 aa		4.04	□□□□□ -1.76
SPI1	YER150W	AAD10	P47182	288 aa		4.04	□□□□□ -1.76
SPI1	YER150W	APT1	P49435	187 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	MNT2	P53059	558 aa		4.04	□□□□□ -1.76
SPI1	YER150W	RMR1	P53060	241 aa		4.04	□□□□□ -1.76
SPI1	YER150W	COG1	P53079	417 aa		4.04	□□□□□ -1.76
SPI1	YER150W	RMD9	P53140	646 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	PNC1	P53184	216 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	NOG2	P53742	486 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	RHO5	P53879	331 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	YNL134C	P53912	376 aa	Known RBP	4.04	□□□□□ -1.76
SPI1	YER150W	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
SPI1	YER150W	UAF30	Q08747	228 aa		4.04	□□□□□ -1.76
SPI1	YER150W	GPB1	Q08886	897 aa		4.04	□□□□□ -1.76
SPI1	YER150W	YOL107W	Q12239	342 aa		4.04	□□□□□ -1.76
SPI1	YER150W	GLO4	Q12320	285 aa		4.04	□□□□□ -1.76
SPI1	YER150W	PTC5	Q12511	572 aa		4.04	□□□□□ -1.76
SPI1	YER150W	SRN2	Q99176	213 aa		4.04	□□□□□ -1.76
SPI1	YER150W	SGS1	P35187	1447 aa		4.04	□□□□□ -1.76
SPI1	YER150W	CDC37	P06101	506 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	HEM1	P09950	548 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	RPL11A	P0C0W9	174 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	NDI1	P32340	513 aa		4.03	□□□□□ -1.76
SPI1	YER150W	ATP11	P32453	318 aa		4.03	□□□□□ -1.76
SPI1	YER150W	HXT1	P32465	570 aa		4.03	□□□□□ -1.76
SPI1	YER150W	KES1	P35844	434 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	YPT52	P36018	234 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	YKR078W	P36158	585 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	NUP133	P36161	1157 aa		4.03	□□□□□ -1.76
SPI1	YER150W	MRPL4	P36517	319 aa		4.03	□□□□□ -1.76
SPI1	YER150W	ADE17	P38009	592 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	ALG14	P38242	237 aa		4.03	□□□□□ -1.76
SPI1	YER150W	POP7	P38291	140 aa		4.03	□□□□□ -1.76
SPI1	YER150W	TSL1	P38427	1098 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	RTC3	P38804	111 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	SEC31	P38968	1273 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	SUR2	P38992	349 aa		4.03	□□□□□ -1.76
SPI1	YER150W	PRM9	P39551	298 aa		4.03	□□□□□ -1.76
SPI1	YER150W	GPB2	P39717	880 aa		4.03	□□□□□ -1.76
SPI1	YER150W	JHD1	P40034	492 aa		4.03	□□□□□ -1.76
SPI1	YER150W	ICP55	P40051	511 aa		4.03	□□□□□ -1.76
SPI1	YER150W	SLZ1	P40167	298 aa		4.03	□□□□□ -1.76
SPI1	YER150W	CAB2	P40506	365 aa		4.03	□□□□□ -1.76
SPI1	YER150W	DOT5	P40553	215 aa		4.03	□□□□□ -1.76
SPI1	YER150W	SLS1	P42900	643 aa		4.03	□□□□□ -1.76
SPI1	YER150W	RPA34	P47006	233 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	NET1	P47035	1189 aa		4.03	□□□□□ -1.76
SPI1	YER150W	URB2	P47108	1174 aa		4.03	□□□□□ -1.76
SPI1	YER150W	GTO1	P48239	356 aa		4.03	□□□□□ -1.76
SPI1	YER150W	MND1	P53102	219 aa		4.03	□□□□□ -1.76
SPI1	YER150W	TIM21	P53220	239 aa		4.03	□□□□□ -1.76
SPI1	YER150W	COQ6	P53318	479 aa		4.03	□□□□□ -1.76
SPI1	YER150W	YNR071C	P53757	342 aa		4.03	□□□□□ -1.76
SPI1	YER150W	PRM1	P53835	661 aa		4.03	□□□□□ -1.76
SPI1	YER150W	HEF3	P53978	1044 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	RPA49	Q01080	415 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	ATG21	Q02887	496 aa		4.03	□□□□□ -1.76
SPI1	YER150W	SRL4	Q03085	281 aa		4.03	□□□□□ -1.76
SPI1	YER150W	SPC2	Q04969	178 aa		4.03	□□□□□ -1.76
SPI1	YER150W	RQC1	Q05468	723 aa	Known RBP	4.03	□□□□□ -1.76
SPI1	YER150W	VPS38	Q05919	439 aa		4.03	□□□□□ -1.76
SPI1	YER150W	GRS2	Q06817	618 aa		4.03	□□□□□ -1.76
SPI1	YER150W	YEH1	Q07804	573 aa		4.03	□□□□□ -1.76
SPI1	YER150W	TLG2	Q08144	397 aa		4.03	□□□□□ -1.76
SPI1	YER150W	LEA1	Q08963	238 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	FMP40	Q08968	688 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	NUS1	Q12063	375 aa		4.03	□□□□□ -1.76
SPI1	YER150W	PUS9	Q12069	462 aa		4.03	□□□□□ -1.76
SPI1	YER150W	ATG29	Q12092	213 aa		4.03	□□□□□ -1.76
SPI1	YER150W	RPL11B	Q3E757	174 aa	Predicted RBP	4.03	□□□□□ -1.76
SPI1	YER150W	YBR182C-A	Q8TGU6	64 aa		4.03	□□□□□ -1.76
SPI1	YER150W	YOS9	Q99220	542 aa		4.03	□□□□□ -1.76
SPI1	YER150W	YPR089W	O13585	888 aa		4.02	□□□□□ -1.77
SPI1	YER150W	RPS17A	P02407	136 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	CBP1	P07252	654 aa		4.02	□□□□□ -1.77
SPI1	YER150W	HTS1	P07263	546 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	LPD1	P09624	499 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-DR6	P0CX70	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-ER1	P0CX71	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-LR2	P0CX72	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-PL	P0CX73	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-JR1	P0CX74	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-LR3	P0CX75	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	TY1A-ML2	P0CX76	440 aa		4.02	□□□□□ -1.77
SPI1	YER150W	SAM1	P10659	382 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	RAP1	P11938	827 aa		4.02	□□□□□ -1.77
SPI1	YER150W	CAF20	P12962	161 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	RPS17B	P14127	136 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	YAK1	P14680	807 aa		4.02	□□□□□ -1.77
SPI1	YER150W	SRV2	P17555	526 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	UBA1	P22515	1024 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	FAA1	P30624	700 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	NTH1	P32356	751 aa		4.02	□□□□□ -1.77
SPI1	YER150W	MVD1	P32377	396 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	ARO4	P32449	370 aa	Known RBP	4.02	□□□□□ -1.77
SPI1	YER150W	PRS1	P32895	427 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms