RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W MCP2Q06567 569 aa4.45□□□□□ -1.7
SHR3YDL212W ATG9Q12142 997 aa4.45□□□□□ -1.7
SHR3YDL212W EDE1P34216 1381 aa4.44□□□□□ -1.7
SHR3YDL212W MGR1P25573 417 aa4.44□□□□□ -1.7
SHR3YDL212W ARP1P38696 384 aa4.44□□□□□ -1.7
SHR3YDL212W AXL2P38928 823 aa4.44□□□□□ -1.7
SHR3YDL212W SEC24P40482 926 aaKnown RBP4.44□□□□□ -1.7
SHR3YDL212W YMR254CQ04838 102 aa4.44□□□□□ -1.7
SHR3YDL212W NRT1Q08485 598 aa4.44□□□□□ -1.7
SHR3YDL212W ERG27Q12452 347 aaKnown RBP4.44□□□□□ -1.7
SHR3YDL212W RPB2P08518 1224 aaKnown RBP4.43□□□□□ -1.7
SHR3YDL212W MRS6P32864 603 aaKnown RBP4.43□□□□□ -1.7
SHR3YDL212W ESL2P36168 1195 aa4.43□□□□□ -1.7
SHR3YDL212W YAT2P40017 923 aa4.43□□□□□ -1.7
SHR3YDL212W VPS4P52917 437 aa4.43□□□□□ -1.7
SHR3YDL212W YNL181WP53878 407 aa4.43□□□□□ -1.7
SHR3YDL212W SMA1Q02651 245 aa4.43□□□□□ -1.7
SHR3YDL212W EKI1Q03764 534 aa4.43□□□□□ -1.7
SHR3YDL212W ARP10Q04549 284 aa4.43□□□□□ -1.7
SHR3YDL212W YLR302CO13544 120 aa4.42□□□□□ -1.7
SHR3YDL212W PFK2P16862 959 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SHR3YDL212W MRP20P32387 263 aa4.42□□□□□ -1.7
SHR3YDL212W PDR3P33200 976 aa4.42□□□□□ -1.7
SHR3YDL212W CNS1P33313 385 aa4.42□□□□□ -1.7
SHR3YDL212W FUI1P38196 639 aa4.42□□□□□ -1.7
SHR3YDL212W RIC1P40395 1056 aa4.42□□□□□ -1.7
SHR3YDL212W IME4P41833 600 aa4.42□□□□□ -1.7
SHR3YDL212W HOS2P53096 452 aaPredicted RBP4.42□□□□□ -1.7
SHR3YDL212W YGR021WP53212 290 aa4.42□□□□□ -1.7
SHR3YDL212W FMP42Q04991 504 aa4.42□□□□□ -1.7
SHR3YDL212W NEW1Q08972 1196 aaKnown RBP4.42□□□□□ -1.7
SHR3YDL212W SSM4P40318 1319 aa4.42□□□□□ -1.7
SHR3YDL212W HNM1P19807 563 aa4.41□□□□□ -1.7
SHR3YDL212W VPS24P36095 224 aaKnown RBP4.41□□□□□ -1.7
SHR3YDL212W UME6P39001 836 aa4.41□□□□□ -1.7
SHR3YDL212W YIL060WP40519 144 aa4.41□□□□□ -1.7
SHR3YDL212W YNL234WP53857 426 aa4.41□□□□□ -1.7
SHR3YDL212W CTL1Q03220 320 aaKnown RBP4.41□□□□□ -1.7
SHR3YDL212W SNO4Q04902 237 aa4.41□□□□□ -1.7
SHR3YDL212W ADE13Q05911 482 aaKnown RBP4.41□□□□□ -1.7
SHR3YDL212W GRS2Q06817 618 aa4.41□□□□□ -1.7
SHR3YDL212W HSP33Q08914 237 aaKnown RBP4.41□□□□□ -1.7
SHR3YDL212W HSP32Q08992 237 aa4.41□□□□□ -1.7
SHR3YDL212W KRS1P15180 591 aaKnown RBP4.4□□□□□ -1.71
SHR3YDL212W CDC23P16522 626 aa4.4□□□□□ -1.71
SHR3YDL212W YPK3P38070 525 aa4.4□□□□□ -1.71
SHR3YDL212W YER010CP40011 234 aa4.4□□□□□ -1.71
SHR3YDL212W PKP1P40530 394 aa4.4□□□□□ -1.71
SHR3YDL212W RTS2P40962 232 aa4.4□□□□□ -1.71
SHR3YDL212W FET5P43561 622 aa4.4□□□□□ -1.71
SHR3YDL212W SAD1P43589 448 aa4.4□□□□□ -1.71
SHR3YDL212W PKP2P53170 491 aa4.4□□□□□ -1.71
SHR3YDL212W PIL1P53252 339 aaKnown RBP4.4□□□□□ -1.71
SHR3YDL212W YLR281CQ05863 155 aa4.4□□□□□ -1.71
SHR3YDL212W YDL218WQ07629 317 aa4.4□□□□□ -1.71
SHR3YDL212W BSC1Q12140 328 aa4.4□□□□□ -1.71
SHR3YDL212W SEC1P30619 724 aaKnown RBP4.39□□□□□ -1.71
SHR3YDL212W STV1P37296 890 aa4.39□□□□□ -1.71
SHR3YDL212W NNF2P53253 936 aa4.39□□□□□ -1.71
SHR3YDL212W IST1P53843 298 aaPredicted RBP4.39□□□□□ -1.71
SHR3YDL212W INN1P53901 409 aa4.39□□□□□ -1.71
SHR3YDL212W RCO1Q04779 684 aa4.39□□□□□ -1.71
SHR3YDL212W PSR2Q07949 397 aa4.39□□□□□ -1.71
SHR3YDL212W NUS1Q12063 375 aa4.39□□□□□ -1.71
SHR3YDL212W YOL087CQ99247 1116 aa4.39□□□□□ -1.71
SHR3YDL212W HXK2P04807 486 aaKnown RBP4.38□□□□□ -1.71
SHR3YDL212W PWP2P25635 923 aaKnown RBP4.38□□□□□ -1.71
SHR3YDL212W CDC15P27636 974 aa4.38□□□□□ -1.71
SHR3YDL212W SLC1P33333 303 aa4.38□□□□□ -1.71
SHR3YDL212W ALY1P36117 915 aa4.38□□□□□ -1.71
SHR3YDL212W RKM3P38222 552 aa4.38□□□□□ -1.71
SHR3YDL212W YMR178WQ03219 274 aaKnown RBP4.38□□□□□ -1.71
SHR3YDL212W YBR085C-AO43137 85 aa4.37□□□□□ -1.71
SHR3YDL212W BAR1P12630 587 aa4.37□□□□□ -1.71
SHR3YDL212W RPB8P20436 146 aa4.37□□□□□ -1.71
SHR3YDL212W PGS1P25578 521 aa4.37□□□□□ -1.71
SHR3YDL212W PPZ1P26570 692 aa4.37□□□□□ -1.71
SHR3YDL212W GAC1P28006 793 aa4.37□□□□□ -1.71
SHR3YDL212W CBF2P32504 956 aa4.37□□□□□ -1.71
SHR3YDL212W MIA40P36046 403 aa4.37□□□□□ -1.71
SHR3YDL212W PHO90P39535 881 aa4.37□□□□□ -1.71
SHR3YDL212W SLZ1P40167 298 aa4.37□□□□□ -1.71
SHR3YDL212W DPB11P47027 764 aaPredicted RBP4.37□□□□□ -1.71
SHR3YDL212W ZDS2P54786 942 aa4.37□□□□□ -1.71
SHR3YDL212W NUP100Q02629 959 aa4.37□□□□□ -1.71
SHR3YDL212W YML131WQ03102 365 aa4.37□□□□□ -1.71
SHR3YDL212W INP53Q12271 1107 aa4.37□□□□□ -1.71
SHR3YDL212W RAD24P32641 659 aa4.36□□□□□ -1.71
SHR3YDL212W SNU114P36048 1008 aaKnown RBP4.36□□□□□ -1.71
SHR3YDL212W BZZ1P38822 633 aa4.36□□□□□ -1.71
SHR3YDL212W IAH1P41734 238 aa4.36□□□□□ -1.71
SHR3YDL212W STR3P53101 465 aaKnown RBP4.36□□□□□ -1.71
SHR3YDL212W MUB1Q03162 620 aa4.36□□□□□ -1.71
SHR3YDL212W YMR317WQ04893 1140 aa4.36□□□□□ -1.71
SHR3YDL212W RSF1Q05043 376 aa4.36□□□□□ -1.71
SHR3YDL212W ANS1P38832 159 aa4.35□□□□□ -1.71
SHR3YDL212W ATG27P46989 271 aa4.35□□□□□ -1.71
SHR3YDL212W RPS7BP48164 190 aaKnown RBP4.35□□□□□ -1.71
SHR3YDL212W INA17Q02888 182 aa4.35□□□□□ -1.71
SHR3YDL212W SKG3Q06315 1026 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms