RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C CIN1P40987 1014 aa3.34□□□□□ -1.87
RPC40YPR110C RSM28Q03430 361 aa3.34□□□□□ -1.87
RPC40YPR110C VIP1Q06685 1146 aaKnown RBP3.34□□□□□ -1.87
RPC40YPR110C THI3Q07471 609 aa3.34□□□□□ -1.87
RPC40YPR110C ENT4Q07872 247 aa3.34□□□□□ -1.87
RPC40YPR110C GPN2Q08726 347 aaPredicted RBP3.34□□□□□ -1.87
RPC40YPR110C YLR111WQ12528 110 aa3.34□□□□□ -1.87
RPC40YPR110C OLE1P21147 510 aaKnown RBP3.33□□□□□ -1.88
RPC40YPR110C PRE8P23639 250 aa3.33□□□□□ -1.88
RPC40YPR110C PDB1P32473 366 aaKnown RBP3.33□□□□□ -1.88
RPC40YPR110C ERV46P39727 415 aa3.33□□□□□ -1.88
RPC40YPR110C ESL1P40456 1118 aa3.33□□□□□ -1.88
RPC40YPR110C BPL1P48445 690 aaPredicted RBP3.33□□□□□ -1.88
RPC40YPR110C DUO1P53168 247 aaKnown RBP3.33□□□□□ -1.88
RPC40YPR110C YPR003CP53394 754 aa3.33□□□□□ -1.88
RPC40YPR110C IST1P53843 298 aaPredicted RBP3.33□□□□□ -1.88
RPC40YPR110C SKG3Q06315 1026 aa3.33□□□□□ -1.88
RPC40YPR110C RIX7Q07844 837 aaKnown RBP3.33□□□□□ -1.88
RPC40YPR110C YPL272CQ08984 517 aa3.33□□□□□ -1.88
RPC40YPR110C NMD4Q12129 218 aa3.33□□□□□ -1.88
RPC40YPR110C YBR126W-AQ8TGU7 68 aa3.33□□□□□ -1.88
RPC40YPR110C YOR111WQ99210 232 aa3.33□□□□□ -1.88
RPC40YPR110C MRP2P10663 115 aaPredicted RBP3.32□□□□□ -1.88
RPC40YPR110C MBR1P23493 339 aa3.32□□□□□ -1.88
RPC40YPR110C CMK1P27466 446 aaKnown RBP3.32□□□□□ -1.88
RPC40YPR110C SOF1P33750 489 aaKnown RBP3.32□□□□□ -1.88
RPC40YPR110C LHS1P36016 881 aa3.32□□□□□ -1.88
RPC40YPR110C ADE17P38009 592 aaKnown RBP3.32□□□□□ -1.88
RPC40YPR110C UBP13P38187 747 aa3.32□□□□□ -1.88
RPC40YPR110C FLC2P39719 783 aa3.32□□□□□ -1.88
RPC40YPR110C ECM10P39987 644 aa3.32□□□□□ -1.88
RPC40YPR110C FCP1Q03254 732 aa3.32□□□□□ -1.88
RPC40YPR110C RAD30Q04049 632 aa3.32□□□□□ -1.88
RPC40YPR110C TSR2Q06672 205 aaKnown RBP3.32□□□□□ -1.88
RPC40YPR110C HUA2Q12134 243 aa3.32□□□□□ -1.88
RPC40YPR110C NDJ1Q12366 352 aa3.32□□□□□ -1.88
RPC40YPR110C NOP58Q12499 511 aaKnown RBP3.32□□□□□ -1.88
RPC40YPR110C SGS1P35187 1447 aa3.32□□□□□ -1.88
RPC40YPR110C INO80P53115 1489 aa3.31□□□□□ -1.88
RPC40YPR110C CDC31P06704 161 aaKnown RBP3.31□□□□□ -1.88
RPC40YPR110C PET111P08468 800 aa3.31□□□□□ -1.88
RPC40YPR110C SUI3P09064 285 aaKnown RBP3.31□□□□□ -1.88
RPC40YPR110C HOM2P13663 365 aaKnown RBP3.31□□□□□ -1.88
RPC40YPR110C KAR3P17119 729 aa3.31□□□□□ -1.88
RPC40YPR110C YCK1P23291 538 aa3.31□□□□□ -1.88
RPC40YPR110C KTR3P38130 404 aaPredicted RBP3.31□□□□□ -1.88
RPC40YPR110C YBL029WP38201 376 aa3.31□□□□□ -1.88
RPC40YPR110C DIA4P38705 446 aaPredicted RBP3.31□□□□□ -1.88
RPC40YPR110C ARN1P38731 627 aa3.31□□□□□ -1.88
RPC40YPR110C RTS1P38903 757 aa3.31□□□□□ -1.88
RPC40YPR110C UIP3P39547 235 aa3.31□□□□□ -1.88
RPC40YPR110C TPA1P40032 644 aaKnown RBP3.31□□□□□ -1.88
RPC40YPR110C PKP1P40530 394 aa3.31□□□□□ -1.88
RPC40YPR110C CTK2P46962 323 aa3.31□□□□□ -1.88
RPC40YPR110C SRB7P47822 140 aa3.31□□□□□ -1.88
RPC40YPR110C ORC5P50874 479 aa3.31□□□□□ -1.88
RPC40YPR110C YGL036WP53185 909 aaPredicted RBP3.31□□□□□ -1.88
RPC40YPR110C MDM1Q01846 1127 aa3.31□□□□□ -1.88
RPC40YPR110C COQ11Q05892 277 aa3.31□□□□□ -1.88
RPC40YPR110C IRC3Q06683 689 aa3.31□□□□□ -1.88
RPC40YPR110C YOR389WQ08912 624 aa3.31□□□□□ -1.88
RPC40YPR110C PGK1P00560 416 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C SEC53P07283 254 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C ILS1P09436 1072 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C MRP7P12687 371 aa3.3□□□□□ -1.88
RPC40YPR110C MET8P15807 274 aa3.3□□□□□ -1.88
RPC40YPR110C SGF29P25554 259 aa3.3□□□□□ -1.88
RPC40YPR110C OCT1P35999 772 aa3.3□□□□□ -1.88
RPC40YPR110C SNU114P36048 1008 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C AUR1P36107 401 aaPredicted RBP3.3□□□□□ -1.88
RPC40YPR110C YBR225WP38321 900 aa3.3□□□□□ -1.88
RPC40YPR110C JHD1P40034 492 aa3.3□□□□□ -1.88
RPC40YPR110C NDE1P40215 560 aa3.3□□□□□ -1.88
RPC40YPR110C YJL107CP42947 387 aa3.3□□□□□ -1.88
RPC40YPR110C IRC7P43623 340 aa3.3□□□□□ -1.88
RPC40YPR110C NMD5P46970 1048 aa3.3□□□□□ -1.88
RPC40YPR110C SMC3P47037 1230 aa3.3□□□□□ -1.88
RPC40YPR110C EAF7P53911 425 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C YPL071CQ02864 156 aa3.3□□□□□ -1.88
RPC40YPR110C SNU56Q03782 492 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C YLR455WQ06188 304 aa3.3□□□□□ -1.88
RPC40YPR110C PIG1Q06216 648 aa3.3□□□□□ -1.88
RPC40YPR110C TPO3Q06451 622 aa3.3□□□□□ -1.88
RPC40YPR110C PSR1Q07800 427 aa3.3□□□□□ -1.88
RPC40YPR110C TCO89Q08921 799 aa3.3□□□□□ -1.88
RPC40YPR110C ATG9Q12142 997 aa3.3□□□□□ -1.88
RPC40YPR110C GET3Q12154 354 aaKnown RBP3.3□□□□□ -1.88
RPC40YPR110C FRE7Q12333 620 aa3.3□□□□□ -1.88
RPC40YPR110C TY1B-DR4Q07793 1604 aa3.3□□□□□ -1.88
RPC40YPR110C TCB3Q03640 1545 aaKnown RBP3.29□□□□□ -1.88
RPC40YPR110C HXK2P04807 486 aaKnown RBP3.29□□□□□ -1.88
RPC40YPR110C CHO1P08456 276 aa3.29□□□□□ -1.88
RPC40YPR110C PWP1P21304 576 aaKnown RBP3.29□□□□□ -1.88
RPC40YPR110C APN1P22936 367 aa3.29□□□□□ -1.88
RPC40YPR110C STE50P25344 346 aa3.29□□□□□ -1.88
RPC40YPR110C MSS51P32335 436 aa3.29□□□□□ -1.88
RPC40YPR110C CUE2P36075 443 aaKnown RBP3.29□□□□□ -1.88
RPC40YPR110C AGP2P38090 596 aa3.29□□□□□ -1.88
RPC40YPR110C MAL33P38157 468 aa3.29□□□□□ -1.88
RPC40YPR110C NOC2P39744 710 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 159.8 ms