RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C ATG12P38316 186 aa9.5□□□□□ -0.89
SPT20YOL148C MTG2P38860 518 aa9.5□□□□□ -0.89
SPT20YOL148C VMA7P39111 118 aa9.5□□□□□ -0.89
SPT20YOL148C MGS1P40151 587 aa9.5□□□□□ -0.89
SPT20YOL148C GSM1P42950 618 aa9.5□□□□□ -0.89
SPT20YOL148C FET5P43561 622 aa9.5□□□□□ -0.89
SPT20YOL148C AZR1P50080 613 aa9.5□□□□□ -0.89
SPT20YOL148C CWC23P52868 283 aaPredicted RBP9.5□□□□□ -0.89
SPT20YOL148C SLD3P53135 668 aa9.5□□□□□ -0.89
SPT20YOL148C YNL010WP53981 241 aaKnown RBP9.5□□□□□ -0.89
SPT20YOL148C MDM36Q06820 579 aa9.5□□□□□ -0.89
SPT20YOL148C WHI4Q07655 649 aaKnown RBP9.5□□□□□ -0.89
SPT20YOL148C YLL056CQ12177 298 aa9.5□□□□□ -0.89
SPT20YOL148C CCP1P00431 361 aa9.49□□□□□ -0.89
SPT20YOL148C ERG12P07277 443 aa9.49□□□□□ -0.89
SPT20YOL148C DBF2P22204 572 aa9.49□□□□□ -0.89
SPT20YOL148C PTC6P25646 442 aa9.49□□□□□ -0.89
SPT20YOL148C UBP11P36026 717 aa9.49□□□□□ -0.89
SPT20YOL148C ATG7P38862 630 aa9.49□□□□□ -0.89
SPT20YOL148C DSS1P39112 969 aa9.49□□□□□ -0.89
SPT20YOL148C YFL040WP43562 540 aa9.49□□□□□ -0.89
SPT20YOL148C RTT101P47050 842 aa9.49□□□□□ -0.89
SPT20YOL148C ARO8P53090 500 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C ARE2P53629 642 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C CDC55Q00362 526 aa9.49□□□□□ -0.89
SPT20YOL148C MUS81Q04149 632 aaPredicted RBP9.49□□□□□ -0.89
SPT20YOL148C SPH1Q06160 661 aa9.49□□□□□ -0.89
SPT20YOL148C SGT1Q08446 395 aa9.49□□□□□ -0.89
SPT20YOL148C CMR1Q12510 522 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C IDI1P15496 288 aa9.49□□□□□ -0.89
SPT20YOL148C KGD1P20967 1014 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C SEC15P22224 910 aa9.49□□□□□ -0.89
SPT20YOL148C RIM1P32445 135 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C MEI5P32489 222 aa9.49□□□□□ -0.89
SPT20YOL148C PTC1P35182 281 aa9.49□□□□□ -0.89
SPT20YOL148C CST26P38226 397 aa9.49□□□□□ -0.89
SPT20YOL148C IFA38P38286 347 aa9.49□□□□□ -0.89
SPT20YOL148C QNS1P38795 714 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C YER137CP40083 148 aaKnown RBP9.49□□□□□ -0.89
SPT20YOL148C YFL012WP43580 148 aa9.49□□□□□ -0.89
SPT20YOL148C AIM23P47015 356 aa9.49□□□□□ -0.89
SPT20YOL148C NMA111P53920 997 aa9.49□□□□□ -0.89
SPT20YOL148C MRPL13Q02204 264 aa9.49□□□□□ -0.89
SPT20YOL148C TPK1P06244 397 aa9.48□□□□□ -0.89
SPT20YOL148C COX11P19516 300 aaKnown RBP9.48□□□□□ -0.89
SPT20YOL148C AMD2P22580 549 aa9.48□□□□□ -0.89
SPT20YOL148C UBC8P28263 218 aa9.48□□□□□ -0.89
SPT20YOL148C RGT1P32862 1170 aa9.48□□□□□ -0.89
SPT20YOL148C ECM13P38195 257 aa9.48□□□□□ -0.89
SPT20YOL148C IST2P38250 946 aa9.48□□□□□ -0.89
SPT20YOL148C YIL054WP40524 105 aa9.48□□□□□ -0.89
SPT20YOL148C REF2P42073 533 aaPredicted RBP9.48□□□□□ -0.89
SPT20YOL148C VPS9P54787 451 aa9.48□□□□□ -0.89
SPT20YOL148C ECM9Q02202 377 aa9.48□□□□□ -0.89
SPT20YOL148C MUK1Q02866 612 aa9.48□□□□□ -0.89
SPT20YOL148C COX20Q04935 205 aa9.48□□□□□ -0.89
SPT20YOL148C YLR031WQ07978 186 aa9.48□□□□□ -0.89
SPT20YOL148C RAX1Q08760 435 aa9.48□□□□□ -0.89
SPT20YOL148C RTR2Q12378 196 aa9.48□□□□□ -0.89
SPT20YOL148C GIS3Q12418 502 aa9.48□□□□□ -0.89
SPT20YOL148C CBP2P03874 630 aaPredicted RBP9.47□□□□□ -0.89
SPT20YOL148C KGD2P19262 463 aaPredicted RBP9.47□□□□□ -0.89
SPT20YOL148C YCR015CP25616 317 aa9.47□□□□□ -0.89
SPT20YOL148C PRP21P32524 280 aaPredicted RBP9.47□□□□□ -0.89
SPT20YOL148C SPC34P36131 295 aa9.47□□□□□ -0.89
SPT20YOL148C SAP4P53036 818 aa9.47□□□□□ -0.89
SPT20YOL148C SLD5Q03406 294 aa9.47□□□□□ -0.89
SPT20YOL148C TRS130Q03660 1102 aa9.47□□□□□ -0.89
SPT20YOL148C ACK1Q07622 623 aaPredicted RBP9.47□□□□□ -0.89
SPT20YOL148C NSI1Q12457 570 aa9.47□□□□□ -0.89
SPT20YOL148C WHI2P12611 486 aa9.47□□□□□ -0.89
SPT20YOL148C UGA1P17649 471 aa9.47□□□□□ -0.89
SPT20YOL148C MET16P18408 261 aaPredicted RBP9.47□□□□□ -0.89
SPT20YOL148C SIT4P20604 311 aa9.47□□□□□ -0.89
SPT20YOL148C YSP3P25036 478 aa9.47□□□□□ -0.89
SPT20YOL148C NAT2P37293 288 aa9.47□□□□□ -0.89
SPT20YOL148C SNX4P47057 423 aa9.47□□□□□ -0.89
SPT20YOL148C ASN2P49090 572 aaKnown RBP9.47□□□□□ -0.89
SPT20YOL148C MND1P53102 219 aa9.47□□□□□ -0.89
SPT20YOL148C YNL108CP53929 270 aa9.47□□□□□ -0.89
SPT20YOL148C YMR160WQ03823 816 aa9.47□□□□□ -0.89
SPT20YOL148C ESA1Q08649 445 aa9.47□□□□□ -0.89
SPT20YOL148C PGC1Q08959 321 aa9.47□□□□□ -0.89
SPT20YOL148C WHI5Q12416 295 aa9.47□□□□□ -0.89
SPT20YOL148C YMR030W-AQ3E760 96 aa9.47□□□□□ -0.89
SPT20YOL148C PMD1P32634 1753 aa9.46□□□□□ -0.9
SPT20YOL148C HMG1P12683 1054 aa9.46□□□□□ -0.9
SPT20YOL148C CCA1P21269 546 aa9.46□□□□□ -0.9
SPT20YOL148C APE2P32454 952 aaKnown RBP9.46□□□□□ -0.9
SPT20YOL148C COT1P32798 439 aa9.46□□□□□ -0.9
SPT20YOL148C SRP101P32916 621 aa9.46□□□□□ -0.9
SPT20YOL148C NIC96P34077 839 aa9.46□□□□□ -0.9
SPT20YOL148C APN2P38207 520 aa9.46□□□□□ -0.9
SPT20YOL148C ERP2P39704 215 aa9.46□□□□□ -0.9
SPT20YOL148C IMA5P40884 581 aa9.46□□□□□ -0.9
SPT20YOL148C CNN1P43618 361 aa9.46□□□□□ -0.9
SPT20YOL148C GUS1P46655 708 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
SPT20YOL148C HOC1P47124 396 aa9.46□□□□□ -0.9
SPT20YOL148C RSM7P47150 247 aa9.46□□□□□ -0.9
SPT20YOL148C CLD1P53264 445 aa9.46□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms