RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RPS3P05750 240 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W RHO1P06780 209 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W THR1P17423 357 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W TGL1P34163 548 aa3.85□□□□□ -1.79
ECM16YMR128W SHU2P38957 223 aa3.85□□□□□ -1.79
ECM16YMR128W SCC4P40090 624 aa3.85□□□□□ -1.79
ECM16YMR128W SNL1P40548 159 aa3.85□□□□□ -1.79
ECM16YMR128W NMA2P53204 395 aa3.85□□□□□ -1.79
ECM16YMR128W RTT102P53330 157 aa3.85□□□□□ -1.79
ECM16YMR128W TY1A-DR2Q03964 440 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W RAD30Q04049 632 aa3.85□□□□□ -1.79
ECM16YMR128W THI7Q05998 598 aa3.85□□□□□ -1.79
ECM16YMR128W CDA1Q06702 301 aa3.85□□□□□ -1.79
ECM16YMR128W ADF1Q2V2Q1 113 aa3.85□□□□□ -1.79
ECM16YMR128W TCP1P12612 559 aaKnown RBP3.84□□□□□ -1.79
ECM16YMR128W PHO81P17442 1178 aa3.84□□□□□ -1.79
ECM16YMR128W CLN2P20438 545 aa3.84□□□□□ -1.79
ECM16YMR128W ZIP1P31111 875 aa3.84□□□□□ -1.79
ECM16YMR128W PEP7P32609 515 aa3.84□□□□□ -1.79
ECM16YMR128W MDJ1P35191 511 aa3.84□□□□□ -1.79
ECM16YMR128W MAE1P36013 669 aaKnown RBP3.84□□□□□ -1.79
ECM16YMR128W YBR138CP38277 524 aa3.84□□□□□ -1.79
ECM16YMR128W YBR285WP38354 144 aa3.84□□□□□ -1.79
ECM16YMR128W FRT2P39734 528 aa3.84□□□□□ -1.79
ECM16YMR128W VMA13P41807 478 aaKnown RBP3.84□□□□□ -1.79
ECM16YMR128W SNZ3P43545 298 aa3.84□□□□□ -1.79
ECM16YMR128W PPT1P53043 513 aa3.84□□□□□ -1.79
ECM16YMR128W SNZ2P53824 298 aa3.84□□□□□ -1.79
ECM16YMR128W YNL146WP53906 100 aa3.84□□□□□ -1.79
ECM16YMR128W NTG2Q08214 380 aa3.84□□□□□ -1.79
ECM16YMR128W ECM29P38737 1868 aa3.84□□□□□ -1.79
ECM16YMR128W IMA3P0CW40 589 aa3.84□□□□□ -1.79
ECM16YMR128W IMA4P0CW41 589 aa3.84□□□□□ -1.79
ECM16YMR128W SNF4P12904 322 aa3.84□□□□□ -1.79
ECM16YMR128W MRP4P32902 394 aa3.84□□□□□ -1.79
ECM16YMR128W YKR015CP36111 568 aa3.84□□□□□ -1.79
ECM16YMR128W COQ9Q05779 260 aa3.84□□□□□ -1.79
ECM16YMR128W IMA2Q08295 589 aa3.84□□□□□ -1.79
ECM16YMR128W CUE5Q08412 411 aaKnown RBP3.84□□□□□ -1.79
ECM16YMR128W YOR389WQ08912 624 aa3.84□□□□□ -1.79
ECM16YMR128W FBP1P09201 348 aa3.84□□□□□ -1.8
ECM16YMR128W SEC63P14906 663 aa3.84□□□□□ -1.8
ECM16YMR128W TSR4P25040 408 aa3.84□□□□□ -1.8
ECM16YMR128W GDA1P32621 518 aa3.84□□□□□ -1.8
ECM16YMR128W ECM10P39987 644 aa3.84□□□□□ -1.8
ECM16YMR128W LAM5P43560 674 aa3.84□□□□□ -1.8
ECM16YMR128W ASN2P49090 572 aaKnown RBP3.84□□□□□ -1.8
ECM16YMR128W STB4P50104 949 aa3.84□□□□□ -1.8
ECM16YMR128W CUZ1P53899 274 aa3.84□□□□□ -1.8
ECM16YMR128W GPI17Q04080 534 aa3.84□□□□□ -1.8
ECM16YMR128W ATG17Q06410 417 aa3.84□□□□□ -1.8
ECM16YMR128W SGT2Q12118 346 aaKnown RBP3.84□□□□□ -1.8
ECM16YMR128W ZPS1Q12512 249 aa3.84□□□□□ -1.8
ECM16YMR128W MDM12Q92328 271 aa3.84□□□□□ -1.8
ECM16YMR128W HBN1Q96VH4 193 aa3.84□□□□□ -1.8
ECM16YMR128W AI5_ALPHAQ9ZZX1 630 aa3.84□□□□□ -1.8
ECM16YMR128W ITR2P30606 609 aa3.83□□□□□ -1.8
ECM16YMR128W TFC1P32367 649 aa3.83□□□□□ -1.8
ECM16YMR128W TFB1P32776 642 aa3.83□□□□□ -1.8
ECM16YMR128W COT1P32798 439 aa3.83□□□□□ -1.8
ECM16YMR128W TDP1P38319 544 aa3.83□□□□□ -1.8
ECM16YMR128W RPT2P40327 437 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W UBP7P40453 1071 aa3.83□□□□□ -1.8
ECM16YMR128W YIL054WP40524 105 aa3.83□□□□□ -1.8
ECM16YMR128W EAF6P47128 113 aa3.83□□□□□ -1.8
ECM16YMR128W YJR120WP47157 116 aa3.83□□□□□ -1.8
ECM16YMR128W ARE2P53629 642 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W SED5Q01590 340 aa3.83□□□□□ -1.8
ECM16YMR128W SPC2Q04969 178 aa3.83□□□□□ -1.8
ECM16YMR128W COA4Q05809 96 aa3.83□□□□□ -1.8
ECM16YMR128W SYT1Q06836 1226 aa3.83□□□□□ -1.8
ECM16YMR128W RCL1Q08096 367 aaPredicted RBP3.83□□□□□ -1.8
ECM16YMR128W PEX15Q08215 383 aa3.83□□□□□ -1.8
ECM16YMR128W SLD7Q08457 257 aa3.83□□□□□ -1.8
ECM16YMR128W CHS5Q12114 671 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W LDB17Q12342 491 aa3.83□□□□□ -1.8
ECM16YMR128W POL30P15873 258 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W YAP1P19880 650 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W CTR86P25355 563 aa3.83□□□□□ -1.8
ECM16YMR128W MSH2P25847 964 aa3.83□□□□□ -1.8
ECM16YMR128W PEX6P33760 1030 aa3.83□□□□□ -1.8
ECM16YMR128W AVT6P40074 448 aa3.83□□□□□ -1.8
ECM16YMR128W IMD4P50094 524 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W YGL108CP53139 140 aa3.83□□□□□ -1.8
ECM16YMR128W BUD32P53323 261 aa3.83□□□□□ -1.8
ECM16YMR128W SLT2Q00772 484 aa3.83□□□□□ -1.8
ECM16YMR128W YML037CQ03703 340 aa3.83□□□□□ -1.8
ECM16YMR128W TY1A-MR1Q04215 440 aa3.83□□□□□ -1.8
ECM16YMR128W HEL2Q05580 639 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W GIS3Q12418 502 aa3.83□□□□□ -1.8
ECM16YMR128W HEM1P09950 548 aaPredicted RBP3.83□□□□□ -1.8
ECM16YMR128W ACH1P32316 526 aa3.83□□□□□ -1.8
ECM16YMR128W TPO5P36029 618 aa3.83□□□□□ -1.8
ECM16YMR128W YBR139WP38109 508 aa3.83□□□□□ -1.8
ECM16YMR128W ATG12P38316 186 aa3.83□□□□□ -1.8
ECM16YMR128W SWC5P38326 303 aa3.83□□□□□ -1.8
ECM16YMR128W MEF2P39677 819 aa3.83□□□□□ -1.8
ECM16YMR128W AST2P39945 430 aaKnown RBP3.83□□□□□ -1.8
ECM16YMR128W YRB2P40517 327 aa3.83□□□□□ -1.8
ECM16YMR128W SHE4P51534 789 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms