RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W IMO32P53219 342 aa2.51□□□□□ -2.01
SNU114YKL173W COX18P53239 316 aa2.51□□□□□ -2.01
SNU114YKL173W JJJ1P53863 590 aa2.51□□□□□ -2.01
SNU114YKL173W YNL058CP53947 316 aa2.51□□□□□ -2.01
SNU114YKL173W RCF1Q03713 159 aa2.51□□□□□ -2.01
SNU114YKL173W PPN1Q04119 674 aa2.51□□□□□ -2.01
SNU114YKL173W GET3Q12154 354 aaKnown RBP2.51□□□□□ -2.01
SNU114YKL173W ATP2P00830 511 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W GCN4P03069 281 aa2.5□□□□□ -2.01
SNU114YKL173W YSP3P25036 478 aa2.5□□□□□ -2.01
SNU114YKL173W KIN82P25341 720 aa2.5□□□□□ -2.01
SNU114YKL173W SNT1P25357 1226 aa2.5□□□□□ -2.01
SNU114YKL173W FUB1P25659 250 aa2.5□□□□□ -2.01
SNU114YKL173W URK1P27515 501 aa2.5□□□□□ -2.01
SNU114YKL173W YMC2P38087 329 aa2.5□□□□□ -2.01
SNU114YKL173W FLC2P39719 783 aa2.5□□□□□ -2.01
SNU114YKL173W YIL077CP40508 320 aa2.5□□□□□ -2.01
SNU114YKL173W SGN1P40561 250 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SNU114YKL173W IST3P40565 148 aaPredicted RBP2.5□□□□□ -2.01
SNU114YKL173W STU2P46675 888 aa2.5□□□□□ -2.01
SNU114YKL173W AAD10P47182 288 aa2.5□□□□□ -2.01
SNU114YKL173W CTR1P49573 406 aa2.5□□□□□ -2.01
SNU114YKL173W VPS4P52917 437 aa2.5□□□□□ -2.01
SNU114YKL173W SPO1P53541 631 aa2.5□□□□□ -2.01
SNU114YKL173W ERO1Q03103 563 aa2.5□□□□□ -2.01
SNU114YKL173W IZH3Q07959 543 aa2.5□□□□□ -2.01
SNU114YKL173W CHS5Q12114 671 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W SMC6Q12749 1114 aa2.5□□□□□ -2.01
SNU114YKL173W RPS9BP05755 195 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W YML003WP0CF16 290 aa2.5□□□□□ -2.01
SNU114YKL173W CDC24P11433 854 aaPredicted RBP2.5□□□□□ -2.01
SNU114YKL173W PRP22P24384 1145 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W LCB1P25045 558 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W ILV6P25605 309 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W ADK2P26364 225 aa2.5□□□□□ -2.01
SNU114YKL173W ALY1P36117 915 aa2.5□□□□□ -2.01
SNU114YKL173W GLG1P36143 616 aa2.5□□□□□ -2.01
SNU114YKL173W YEL025CP39991 1188 aa2.5□□□□□ -2.01
SNU114YKL173W YEL020CP39994 560 aa2.5□□□□□ -2.01
SNU114YKL173W ATF1P40353 525 aa2.5□□□□□ -2.01
SNU114YKL173W ARG2P40360 574 aa2.5□□□□□ -2.01
SNU114YKL173W YIL166CP40445 542 aa2.5□□□□□ -2.01
SNU114YKL173W MPS3P47069 682 aa2.5□□□□□ -2.01
SNU114YKL173W MRK1P50873 501 aa2.5□□□□□ -2.01
SNU114YKL173W YGL036WP53185 909 aaPredicted RBP2.5□□□□□ -2.01
SNU114YKL173W YGR054WP53235 642 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W RPS15Q01855 142 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W ATG21Q02887 496 aa2.5□□□□□ -2.01
SNU114YKL173W PRP3Q03338 469 aaPredicted RBP2.5□□□□□ -2.01
SNU114YKL173W HOF1Q05080 669 aa2.5□□□□□ -2.01
SNU114YKL173W RIX7Q07844 837 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W GPN2Q08726 347 aaPredicted RBP2.5□□□□□ -2.01
SNU114YKL173W BMS1Q08965 1183 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W USV1Q12132 391 aa2.5□□□□□ -2.01
SNU114YKL173W Q0010Q9ZZX9 128 aa2.5□□□□□ -2.01
SNU114YKL173W CBS1P14066 229 aa2.5□□□□□ -2.01
SNU114YKL173W YCR061WP25639 631 aa2.5□□□□□ -2.01
SNU114YKL173W ANP1P32629 500 aa2.5□□□□□ -2.01
SNU114YKL173W PEX5P35056 612 aa2.5□□□□□ -2.01
SNU114YKL173W MRPL7P36519 292 aa2.5□□□□□ -2.01
SNU114YKL173W JHD1P40034 492 aa2.5□□□□□ -2.01
SNU114YKL173W TMN3P40071 706 aa2.5□□□□□ -2.01
SNU114YKL173W MEP1P40260 492 aa2.5□□□□□ -2.01
SNU114YKL173W SEC27P41811 889 aaKnown RBP2.5□□□□□ -2.01
SNU114YKL173W CIR1P42940 261 aa2.5□□□□□ -2.01
SNU114YKL173W ZAP1P47043 880 aa2.5□□□□□ -2.01
SNU114YKL173W CDC45Q08032 650 aa2.5□□□□□ -2.01
SNU114YKL173W YPL191CQ08930 360 aa2.5□□□□□ -2.01
SNU114YKL173W SKM1Q12469 655 aa2.5□□□□□ -2.01
SNU114YKL173W YOR111WQ99210 232 aa2.5□□□□□ -2.01
SNU114YKL173W YLR302CO13544 120 aa2.49□□□□□ -2.01
SNU114YKL173W KIN3P22209 435 aa2.49□□□□□ -2.01
SNU114YKL173W GCS1P35197 352 aa2.49□□□□□ -2.01
SNU114YKL173W CUE2P36075 443 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W MRPL36P36531 177 aa2.49□□□□□ -2.01
SNU114YKL173W YHR097CP38809 366 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W ARO9P38840 513 aaPredicted RBP2.49□□□□□ -2.01
SNU114YKL173W SLZ1P40167 298 aa2.49□□□□□ -2.01
SNU114YKL173W RGI2P40188 164 aa2.49□□□□□ -2.01
SNU114YKL173W MET28P40573 187 aa2.49□□□□□ -2.01
SNU114YKL173W GPI8P49018 411 aa2.49□□□□□ -2.01
SNU114YKL173W LCL3P53153 274 aa2.49□□□□□ -2.01
SNU114YKL173W YGR151CP53287 111 aa2.49□□□□□ -2.01
SNU114YKL173W COQ11Q05892 277 aa2.49□□□□□ -2.01
SNU114YKL173W YBR126W-AQ8TGU7 68 aa2.49□□□□□ -2.01
SNU114YKL173W YOR019WQ99248 730 aa2.49□□□□□ -2.01
SNU114YKL173W TUF1P02992 437 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W POL4P25615 582 aa2.49□□□□□ -2.01
SNU114YKL173W SAS3P34218 831 aa2.49□□□□□ -2.01
SNU114YKL173W GMH1P36125 273 aa2.49□□□□□ -2.01
SNU114YKL173W YPT10P38146 199 aa2.49□□□□□ -2.01
SNU114YKL173W SRP72P38688 640 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W RIX1P38883 763 aaPredicted RBP2.49□□□□□ -2.01
SNU114YKL173W SMF1P38925 575 aa2.49□□□□□ -2.01
SNU114YKL173W CAJ1P39101 391 aa2.49□□□□□ -2.01
SNU114YKL173W SEC9P40357 651 aa2.49□□□□□ -2.01
SNU114YKL173W YJL068CP40363 299 aa2.49□□□□□ -2.01
SNU114YKL173W MET18P40469 1032 aa2.49□□□□□ -2.01
SNU114YKL173W TIM11P81449 96 aaPredicted RBP2.49□□□□□ -2.01
SNU114YKL173W HOT1Q03213 719 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms