RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	APA1	P16550	321 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	BEM1	P29366	551 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	SPS19	P32573	292 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	GDA1	P32621	518 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	PEX5	P35056	612 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	CTF13	P35203	478 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YKL151C	P36059	337 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	UTH1	P36135	365 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	RRP3	P38712	501 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	GND1	P38720	489 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	PCL5	P38794	229 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	RPH1	P39956	796 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YJL070C	P40361	888 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YPS6	P40583	537 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	PXA1	P41909	870 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YPL113C	Q02961	396 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	NHX1	Q04121	633 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	PNP1	Q05788	311 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	ADE13	Q05911	482 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	ATG23	Q06671	453 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YFT2	Q06676	274 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	CUE5	Q08412	411 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	MPC54	Q08550	464 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	RMD5	Q12508	421 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	YKR104W	P0CE69	306 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	NSP1	P14907	823 aa	Known RBP	5.81	□□□□□ -1.48
ATG12	YBR217W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
ATG12	YBR217W	HSP60	P19882	572 aa	Known RBP	5.81	□□□□□ -1.48
ATG12	YBR217W	EPT1	P22140	391 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	URA10	P30402	227 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	SLD2	P34252	453 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	MRP21	P38175	177 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	IRR1	P40541	1150 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	SAE2	P46946	345 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	YMR027W	Q04371	470 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	CIA1	Q05583	330 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	YDL129W	Q07555	291 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	NOP6	Q07623	225 aa	Known RBP	5.81	□□□□□ -1.48
ATG12	YBR217W	NUR1	Q12066	484 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	FRT1	Q99332	602 aa		5.81	□□□□□ -1.48
ATG12	YBR217W	CDC8	P00572	216 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	RAD1	P06777	1100 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	SPS1	P08458	490 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	RPL40A	P0CH08	128 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	RPL40B	P0CH09	128 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	POL30	P15873	258 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	HEM15	P16622	393 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	SNF5	P18480	905 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	RPO26	P20435	155 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	VAN1	P23642	535 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	RFA2	P26754	273 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	LDB7	P38210	180 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	CYC2	P38909	366 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	STN1	P38960	494 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	ACO2	P39533	789 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	ALG8	P40351	577 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	DSN1	P40568	576 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	ALA1	P40825	983 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	GTS1	P40956	396 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	CEP3	P40969	608 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	CTK3	P46963	296 aa	Predicted RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	PRP31	P49704	494 aa	Predicted RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	SWS2	P53937	143 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	ARP4	P80428	489 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	YDR444W	Q04093	687 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	EMI1	Q04406	187 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	HRK1	Q08732	759 aa	Known RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	RTT10	Q08924	1013 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	TFB4	Q12004	338 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	TRM8	Q12009	286 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	TGL5	Q12043	749 aa		5.8	□□□□□ -1.48
ATG12	YBR217W	SMF3	Q12078	473 aa	Predicted RBP	5.8	□□□□□ -1.48
ATG12	YBR217W	CSF1	Q12150	2958 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	ILS1	P09436	1072 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	TUB1	P09733	447 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	INO1	P11986	533 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	GLN4	P13188	809 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	TRM1	P15565	570 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	AMS1	P22855	1083 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	SNT1	P25357	1226 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	KAR4	P25583	335 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	YCR099C	P25657	155 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	GUT2	P32191	649 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	SFP1	P32432	683 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	PRP18	P33411	251 aa	Predicted RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	MAK5	P38112	773 aa	Predicted RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	IML3	P38265	245 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	SPP381	P38282	291 aa	Predicted RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	YHI9	P38765	294 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	LTP1	P40347	161 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	YIL108W	P40483	696 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	MIC19	P43594	170 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	CCT8	P47079	568 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	PEX8	P53248	589 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	SUN4	P53616	420 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	PET117	Q02771	107 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	TFB2	Q02939	513 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	HOS3	Q02959	697 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	ARX1	Q03862	593 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	YDR109C	Q04585	715 aa		5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms