RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	GIP4	P39732	760 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	RPL34B	P40525	121 aa	Known RBP	9.63	□□□□□ -0.87
MSB4	YOL112W	ALA1	P40825	983 aa	Known RBP	9.63	□□□□□ -0.87
MSB4	YOL112W	SIP4	P46954	829 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	NUP84	P52891	726 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	COG1	P53079	417 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	COG7	P53195	279 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	CAF120	P53836	1060 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	RSC4	Q02206	625 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	YDR132C	Q03900	495 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	HPF1	Q05164	967 aa		9.63	□□□□□ -0.87
MSB4	YOL112W	SMI1	P32566	505 aa		9.62	□□□□□ -0.87
MSB4	YOL112W	RML2	P32611	393 aa		9.62	□□□□□ -0.87
MSB4	YOL112W	PMT1	P33775	817 aa		9.62	□□□□□ -0.87
MSB4	YOL112W	SPP381	P38282	291 aa	Predicted RBP	9.62	□□□□□ -0.87
MSB4	YOL112W	PIK1	P39104	1066 aa		9.62	□□□□□ -0.87
MSB4	YOL112W	YMR027W	Q04371	470 aa		9.62	□□□□□ -0.87
MSB4	YOL112W	BUD20	Q08004	166 aa	Predicted RBP	9.62	□□□□□ -0.87
MSB4	YOL112W	ERG20	P08524	352 aa	Known RBP	9.61	□□□□□ -0.87
MSB4	YOL112W	YSP3	P25036	478 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	PHO11	P35842	467 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	PHO12	P38693	467 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	SAE2	P46946	345 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	YGL140C	P53120	1219 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	SPC105	P53148	917 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	TRS31	Q03337	283 aa		9.61	□□□□□ -0.87
MSB4	YOL112W	HEL2	Q05580	639 aa	Known RBP	9.61	□□□□□ -0.87
MSB4	YOL112W	CUE5	Q08412	411 aa	Known RBP	9.61	□□□□□ -0.87
MSB4	YOL112W	BRF1	P29056	596 aa		9.6	□□□□□ -0.87
MSB4	YOL112W	URA10	P30402	227 aa		9.6	□□□□□ -0.87
MSB4	YOL112W	MEF2	P39677	819 aa		9.6	□□□□□ -0.87
MSB4	YOL112W	CPR6	P53691	371 aa	Known RBP	9.6	□□□□□ -0.87
MSB4	YOL112W	YMR178W	Q03219	274 aa	Known RBP	9.6	□□□□□ -0.87
MSB4	YOL112W	CLU1	Q03690	1277 aa	Known RBP	9.6	□□□□□ -0.87
MSB4	YOL112W	ADE13	Q05911	482 aa	Known RBP	9.6	□□□□□ -0.87
MSB4	YOL112W	YEL077C	Q3E7X8	1277 aa		9.6	□□□□□ -0.87
MSB4	YOL112W	ACC1	Q00955	2233 aa	Known RBP	9.6	□□□□□ -0.87
MSB4	YOL112W	CCR4	P31384	837 aa	Known RBP	9.59	□□□□□ -0.87
MSB4	YOL112W	YHR078W	P38799	552 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	SEO1	P39709	593 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	RGI2	P40188	164 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	SET2	P46995	733 aa	Known RBP	9.59	□□□□□ -0.87
MSB4	YOL112W	YOR338W	Q99326	363 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	IRA2	P19158	3079 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	RAD1	P06777	1100 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	9.59	□□□□□ -0.87	not detected
MSB4	YOL112W	EMC1	P25574	760 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	GDA1	P32621	518 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	IMP3	P32899	183 aa	Predicted RBP	9.59	□□□□□ -0.87
MSB4	YOL112W	PEX5	P35056	612 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	GND1	P38720	489 aa	Known RBP	9.59	□□□□□ -0.87
MSB4	YOL112W	TIM17	P39515	158 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	MTO1	P53070	669 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	PPN1	Q04119	674 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	NHX1	Q04121	633 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	MCP2	Q06567	569 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	MPC54	Q08550	464 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	RMD5	Q12508	421 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	Q0182	Q9ZZW1	134 aa		9.59	□□□□□ -0.87
MSB4	YOL112W	CAN1	P04817	590 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	INO1	P11986	533 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	GAL11	P19659	1081 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	KAR4	P25583	335 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	RPC37	P36121	282 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	MRP21	P38175	177 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	TAE1	P38340	232 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	WSC4	P38739	605 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	YJR061W	P40355	935 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	NBP35	P52920	328 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	FRE4	P53746	719 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	YNL143C	P53908	130 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	EFM6	P53970	246 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	GSF2	Q04697	403 aa	Known RBP	9.58	□□□□□ -0.88
MSB4	YOL112W	MFB1	Q04922	465 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	OPI10	Q08202	246 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	GNT1	Q12096	491 aa		9.58	□□□□□ -0.88
MSB4	YOL112W	SEN1	Q00416	2231 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	ILS1	P09436	1072 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	ADH4	P10127	382 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	AMD1	P15274	810 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	BEM1	P29366	551 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	MRPL9	P31334	269 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	CTF13	P35203	478 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	YBR259W	P38338	688 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	LRP1	P38801	184 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	BAT1	P38891	393 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	SMX2	P40204	77 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	PXA1	P41909	870 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	YJR039W	P47107	1121 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	ZIP2	P53061	704 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	NOP15	P53927	220 aa	Predicted RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	SHR3	Q02774	210 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	RPN9	Q04062	393 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	JIP5	Q06214	492 aa	Predicted RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	SAM4	Q08985	325 aa	Known RBP	9.57	□□□□□ -0.88
MSB4	YOL112W	NAG1	Q8TGN9	163 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	FRT1	Q99332	602 aa		9.57	□□□□□ -0.88
MSB4	YOL112W	HSP60	P19882	572 aa	Known RBP	9.56	□□□□□ -0.88
MSB4	YOL112W	SRX1	P36077	127 aa		9.56	□□□□□ -0.88
MSB4	YOL112W	COQ5	P49017	307 aa		9.56	□□□□□ -0.88

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms