RNA–Protein interactions for RNA: YMR218C

TRS130, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS130, Length 3,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS130YMR218C SEM1O94742 89 aa2.5□□□□□ -2.01
TRS130YMR218C CDC36P06100 191 aaPredicted RBP2.5□□□□□ -2.01
TRS130YMR218C CAR2P07991 424 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C YML002WP0CF17 737 aa2.5□□□□□ -2.01
TRS130YMR218C RPC31P17890 251 aa2.5□□□□□ -2.01
TRS130YMR218C HOP1P20050 605 aa2.5□□□□□ -2.01
TRS130YMR218C ROX1P25042 368 aa2.5□□□□□ -2.01
TRS130YMR218C STE50P25344 346 aa2.5□□□□□ -2.01
TRS130YMR218C POT1P27796 417 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
TRS130YMR218C BMH1P29311 267 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C KNS1P32350 737 aaPredicted RBP2.5□□□□□ -2.01
TRS130YMR218C NGG1P32494 702 aa2.5□□□□□ -2.01
TRS130YMR218C DBP7P36120 742 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C PGM2P37012 569 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C YBR138CP38277 524 aa2.5□□□□□ -2.01
TRS130YMR218C RRM3P38766 723 aa2.5□□□□□ -2.01
TRS130YMR218C RTC3P38804 111 aaPredicted RBP2.5□□□□□ -2.01
TRS130YMR218C SWD1P39706 426 aa2.5□□□□□ -2.01
TRS130YMR218C YFL054CP43549 646 aa2.5□□□□□ -2.01
TRS130YMR218C EFM5P53200 248 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C BSC5P53755 489 aa2.5□□□□□ -2.01
TRS130YMR218C ATP25Q03153 612 aa2.5□□□□□ -2.01
TRS130YMR218C VBA4Q04602 768 aaKnown RBP2.5□□□□□ -2.01
TRS130YMR218C SGO1Q08490 590 aa2.5□□□□□ -2.01
TRS130YMR218C POM152P39685 1337 aa2.49□□□□□ -2.01
TRS130YMR218C DIF1O13577 133 aa2.49□□□□□ -2.01
TRS130YMR218C GCN4P03069 281 aa2.49□□□□□ -2.01
TRS130YMR218C SEC53P07283 254 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C REV1P12689 985 aa2.49□□□□□ -2.01
TRS130YMR218C RFA1P22336 621 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C RIT1P23796 513 aa2.49□□□□□ -2.01
TRS130YMR218C SED4P25365 1065 aa2.49□□□□□ -2.01
TRS130YMR218C PDC6P26263 563 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C CYS3P31373 394 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C PRO1P32264 428 aa2.49□□□□□ -2.01
TRS130YMR218C ECM4P36156 370 aa2.49□□□□□ -2.01
TRS130YMR218C POL12P38121 705 aaPredicted RBP2.49□□□□□ -2.01
TRS130YMR218C YBL086CP38177 466 aa2.49□□□□□ -2.01
TRS130YMR218C MUP3P38734 546 aa2.49□□□□□ -2.01
TRS130YMR218C IRC24P40580 263 aa2.49□□□□□ -2.01
TRS130YMR218C IBA57P47158 497 aa2.49□□□□□ -2.01
TRS130YMR218C GTR2P53290 341 aa2.49□□□□□ -2.01
TRS130YMR218C HOT1Q03213 719 aa2.49□□□□□ -2.01
TRS130YMR218C PML1Q07930 204 aaPredicted RBP2.49□□□□□ -2.01
TRS130YMR218C RVB2Q12464 471 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C YBL111CQ3E7Y5 667 aa2.49□□□□□ -2.01
TRS130YMR218C YBR126W-AQ8TGU7 68 aa2.49□□□□□ -2.01
TRS130YMR218C VTH1P40438 1549 aa2.49□□□□□ -2.01
TRS130YMR218C VTH2P40890 1549 aa2.49□□□□□ -2.01
TRS130YMR218C FKS3Q04952 1785 aa2.49□□□□□ -2.01
TRS130YMR218C ADE3P07245 946 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C CDC4P07834 779 aa2.49□□□□□ -2.01
TRS130YMR218C YEL076C-AP0CX16 216 aa2.49□□□□□ -2.01
TRS130YMR218C YLR464WP0CX17 216 aa2.49□□□□□ -2.01
TRS130YMR218C PAP1P29468 568 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C SSO1P32867 290 aa2.49□□□□□ -2.01
TRS130YMR218C UTP11P34247 250 aaPredicted RBP2.49□□□□□ -2.01
TRS130YMR218C STN1P38960 494 aa2.49□□□□□ -2.01
TRS130YMR218C PNT1P38969 423 aa2.49□□□□□ -2.01
TRS130YMR218C YEL076CP39971 216 aa2.49□□□□□ -2.01
TRS130YMR218C SPO22P40511 975 aa2.49□□□□□ -2.01
TRS130YMR218C CCT7P42943 550 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C YFR018CP43599 363 aa2.49□□□□□ -2.01
TRS130YMR218C FOL2P51601 243 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C LIF1P53150 421 aa2.49□□□□□ -2.01
TRS130YMR218C CIK1Q01649 594 aa2.49□□□□□ -2.01
TRS130YMR218C ABZ2Q03266 374 aa2.49□□□□□ -2.01
TRS130YMR218C CRN1Q06440 651 aa2.49□□□□□ -2.01
TRS130YMR218C FMP45Q07651 309 aa2.49□□□□□ -2.01
TRS130YMR218C YOR059CQ08448 450 aaKnown RBP2.49□□□□□ -2.01
TRS130YMR218C GPB1Q08886 897 aa2.49□□□□□ -2.01
TRS130YMR218C DDC1Q08949 612 aa2.49□□□□□ -2.01
TRS130YMR218C YOR022CQ12204 715 aa2.49□□□□□ -2.01
TRS130YMR218C SLP1Q12232 587 aa2.49□□□□□ -2.01
TRS130YMR218C FAS2P19097 1887 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C RPS9AO13516 197 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C YLR302CO13544 120 aa2.48□□□□□ -2.01
TRS130YMR218C GPH1P06738 902 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C VAS1P07806 1104 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C RPL11AP0C0W9 174 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C FUS1P11710 512 aa2.48□□□□□ -2.01
TRS130YMR218C IMG2P25642 146 aaPredicted RBP2.48□□□□□ -2.01
TRS130YMR218C ERV1P27882 189 aa2.48□□□□□ -2.01
TRS130YMR218C NIP1P32497 812 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C DRE2P36152 348 aa2.48□□□□□ -2.01
TRS130YMR218C STV1P37296 890 aa2.48□□□□□ -2.01
TRS130YMR218C SIF2P38262 535 aa2.48□□□□□ -2.01
TRS130YMR218C RGD1P38339 666 aa2.48□□□□□ -2.01
TRS130YMR218C LEU5P38702 357 aa2.48□□□□□ -2.01
TRS130YMR218C DED81P38707 554 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C SPT8P38915 602 aa2.48□□□□□ -2.01
TRS130YMR218C YJR061WP40355 935 aa2.48□□□□□ -2.01
TRS130YMR218C RLP7P40693 322 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C SKP2P42843 763 aa2.48□□□□□ -2.01
TRS130YMR218C RPN11P43588 306 aaKnown RBP2.48□□□□□ -2.01
TRS130YMR218C YJR124CP47159 448 aa2.48□□□□□ -2.01
TRS130YMR218C CSI1Q04368 295 aa2.48□□□□□ -2.01
TRS130YMR218C ENT4Q07872 247 aa2.48□□□□□ -2.01
TRS130YMR218C GPM3Q12326 303 aa2.48□□□□□ -2.01
TRS130YMR218C RRP36Q12481 300 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms