RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W YKL133CP36066 463 aa2.19□□□□□ -2.06
VPS34YLR240W MAD3P47074 515 aa2.19□□□□□ -2.06
VPS34YLR240W ACS1Q01574 713 aa2.19□□□□□ -2.06
VPS34YLR240W YML119WQ03208 357 aa2.19□□□□□ -2.06
VPS34YLR240W RAD33Q04231 177 aa2.19□□□□□ -2.06
VPS34YLR240W MLC2Q06580 163 aa2.19□□□□□ -2.06
VPS34YLR240W BRE1Q07457 700 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W AIM6Q07716 390 aa2.19□□□□□ -2.06
VPS34YLR240W RTT109Q07794 436 aa2.19□□□□□ -2.06
VPS34YLR240W LSP1Q12230 341 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W LCB4Q12246 624 aa2.19□□□□□ -2.06
VPS34YLR240W RDL1Q12305 139 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W YER175W-AQ8TGU4 54 aa2.19□□□□□ -2.06
VPS34YLR240W CTT1P06115 562 aa2.19□□□□□ -2.06
VPS34YLR240W TPM1P17536 199 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W NUP1P20676 1076 aa2.19□□□□□ -2.06
VPS34YLR240W GCD7P32502 381 aaPredicted RBP2.19□□□□□ -2.06
VPS34YLR240W ARO9P38840 513 aaPredicted RBP2.19□□□□□ -2.06
VPS34YLR240W STT3P39007 718 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W LAS21P40367 830 aa2.19□□□□□ -2.06
VPS34YLR240W BST1P43571 1029 aa2.19□□□□□ -2.06
VPS34YLR240W BNA3P47039 444 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W BPL1P48445 690 aaPredicted RBP2.19□□□□□ -2.06
VPS34YLR240W TAN1P53072 289 aaPredicted RBP2.19□□□□□ -2.06
VPS34YLR240W COG2P53271 262 aa2.19□□□□□ -2.06
VPS34YLR240W ATP23P53722 227 aa2.19□□□□□ -2.06
VPS34YLR240W EAF7P53911 425 aaKnown RBP2.19□□□□□ -2.06
VPS34YLR240W ORM2Q06144 216 aa2.19□□□□□ -2.06
VPS34YLR240W BSP1Q06604 576 aa2.19□□□□□ -2.06
VPS34YLR240W CYK3Q07533 885 aa2.19□□□□□ -2.06
VPS34YLR240W SSP2Q08646 371 aa2.19□□□□□ -2.06
VPS34YLR240W Q0010Q9ZZX9 128 aa2.19□□□□□ -2.06
VPS34YLR240W SSK22P25390 1331 aaPredicted RBP2.18□□□□□ -2.06
VPS34YLR240W GAL1P04385 528 aa2.18□□□□□ -2.06
VPS34YLR240W HSP104P31539 908 aaKnown RBP2.18□□□□□ -2.06
VPS34YLR240W LNP1P38878 278 aa2.18□□□□□ -2.06
VPS34YLR240W ARB1P40024 610 aaKnown RBP2.18□□□□□ -2.06
VPS34YLR240W QRI7P43122 407 aa2.18□□□□□ -2.06
VPS34YLR240W SAE2P46946 345 aa2.18□□□□□ -2.06
VPS34YLR240W TEP1P53916 434 aa2.18□□□□□ -2.06
VPS34YLR240W CRF1Q04930 467 aa2.18□□□□□ -2.06
VPS34YLR240W HRD3Q05787 833 aa2.18□□□□□ -2.06
VPS34YLR240W YDL242WQ07746 117 aa2.18□□□□□ -2.06
VPS34YLR240W YLR111WQ12528 110 aa2.18□□□□□ -2.06
VPS34YLR240W MRP7P12687 371 aa2.18□□□□□ -2.06
VPS34YLR240W SIR1P21691 654 aa2.18□□□□□ -2.06
VPS34YLR240W VPS8P39702 1274 aa2.18□□□□□ -2.06
VPS34YLR240W ESF2P53743 316 aaKnown RBP2.18□□□□□ -2.06
VPS34YLR240W UBP16Q02863 499 aa2.18□□□□□ -2.06
VPS34YLR240W RMT2Q03305 412 aa2.18□□□□□ -2.06
VPS34YLR240W FRE7Q12333 620 aa2.18□□□□□ -2.06
VPS34YLR240W MSS18P08593 268 aa2.17□□□□□ -2.06
VPS34YLR240W CDC16P09798 840 aa2.17□□□□□ -2.06
VPS34YLR240W RRP43P25359 394 aaPredicted RBP2.17□□□□□ -2.06
VPS34YLR240W PTP2P29461 750 aa2.17□□□□□ -2.06
VPS34YLR240W BEM3P32873 1128 aa2.17□□□□□ -2.06
VPS34YLR240W OSH3P38713 996 aaKnown RBP2.17□□□□□ -2.06
VPS34YLR240W ULP2P40537 1034 aaPredicted RBP2.17□□□□□ -2.06
VPS34YLR240W PIF1P07271 859 aa2.17□□□□□ -2.06
VPS34YLR240W APM3P38153 483 aa2.17□□□□□ -2.06
VPS34YLR240W YNG2P38806 282 aaKnown RBP2.17□□□□□ -2.06
VPS34YLR240W MTG2P38860 518 aa2.17□□□□□ -2.06
VPS34YLR240W XBP1P40489 647 aa2.17□□□□□ -2.06
VPS34YLR240W CIR1P42940 261 aa2.17□□□□□ -2.06
VPS34YLR240W NMD5P46970 1048 aa2.17□□□□□ -2.06
VPS34YLR240W MOT3P54785 490 aaKnown RBP2.17□□□□□ -2.06
VPS34YLR240W PLM2Q04383 521 aa2.17□□□□□ -2.06
VPS34YLR240W IMH1Q06704 911 aaKnown RBP2.17□□□□□ -2.06
VPS34YLR240W DIB1Q06819 143 aaPredicted RBP2.17□□□□□ -2.06
VPS34YLR240W NCB2Q92317 146 aa2.17□□□□□ -2.06
VPS34YLR240W PNO1Q99216 274 aaKnown RBP2.17□□□□□ -2.06
VPS34YLR240W SAC3P46674 1301 aa2.16□□□□□ -2.06
VPS34YLR240W BI2P03873 423 aa2.16□□□□□ -2.06
VPS34YLR240W PDE1P22434 369 aa2.16□□□□□ -2.06
VPS34YLR240W MCM3P24279 971 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W KES1P35844 434 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W VPS24P36095 224 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W HIS6P40545 261 aa2.16□□□□□ -2.06
VPS34YLR240W CPR6P53691 371 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W IWR1Q07532 353 aaPredicted RBP2.16□□□□□ -2.06
VPS34YLR240W YPL191CQ08930 360 aa2.16□□□□□ -2.06
VPS34YLR240W RRP6Q12149 733 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W ENT1Q12518 454 aa2.16□□□□□ -2.06
VPS34YLR240W YBR255C-AQ3E776 120 aa2.16□□□□□ -2.06
VPS34YLR240W DUR1,2P32528 1835 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W OSM1P21375 501 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W SAP1P39955 897 aaKnown RBP2.16□□□□□ -2.06
VPS34YLR240W SNO3P43544 222 aa2.16□□□□□ -2.06
VPS34YLR240W RSC9Q03124 581 aa2.16□□□□□ -2.06
VPS34YLR240W CSI1Q04368 295 aa2.16□□□□□ -2.06
VPS34YLR240W RAD34Q06665 692 aa2.16□□□□□ -2.06
VPS34YLR240W AFT2Q08957 416 aa2.16□□□□□ -2.06
VPS34YLR240W ICL2Q12031 575 aa2.16□□□□□ -2.06
VPS34YLR240W CET1O13297 549 aaPredicted RBP2.15□□□□□ -2.06
VPS34YLR240W SES1P07284 462 aaKnown RBP2.15□□□□□ -2.06
VPS34YLR240W RNR2P09938 399 aaKnown RBP2.15□□□□□ -2.06
VPS34YLR240W POL3P15436 1097 aa2.15□□□□□ -2.06
VPS34YLR240W RIT1P23796 513 aa2.15□□□□□ -2.06
VPS34YLR240W FTH1P38310 465 aa2.15□□□□□ -2.06
VPS34YLR240W ERC1P38767 581 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms