RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C VHC1P38329 1120 aa10.2□□□□□ -0.78
YSR3YKR053C SCC4P40090 624 aa10.2□□□□□ -0.78
YSR3YKR053C DPH1P40487 425 aaKnown RBP10.2□□□□□ -0.78
YSR3YKR053C DSN1P40568 576 aa10.2□□□□□ -0.78
YSR3YKR053C NUP100Q02629 959 aa10.2□□□□□ -0.78
YSR3YKR053C YMR160WQ03823 816 aa10.2□□□□□ -0.78
YSR3YKR053C EAF1Q06337 982 aa10.2□□□□□ -0.78
YSR3YKR053C ESC2Q06340 456 aa10.2□□□□□ -0.78
YSR3YKR053C MCP2Q06567 569 aa10.2□□□□□ -0.78
YSR3YKR053C HBT1Q07653 1046 aaKnown RBP10.2□□□□□ -0.78
YSR3YKR053C YEL077CQ3E7X8 1277 aa10.2□□□□□ -0.78
YSR3YKR053C YML002WP0CF17 737 aa10.19□□□□□ -0.78
YSR3YKR053C SPT15P13393 240 aaKnown RBP10.19□□□□□ -0.78
YSR3YKR053C SMI1P32566 505 aa10.19□□□□□ -0.78
YSR3YKR053C CTF13P35203 478 aa10.19□□□□□ -0.78
YSR3YKR053C KES1P35844 434 aaKnown RBP10.19□□□□□ -0.78
YSR3YKR053C UTH1P36135 365 aa10.19□□□□□ -0.78
YSR3YKR053C PBP2P38151 413 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
YSR3YKR053C STN1P38960 494 aa10.19□□□□□ -0.78
YSR3YKR053C FAA3P39002 694 aa10.19□□□□□ -0.78
YSR3YKR053C RTA1P53047 317 aa10.19□□□□□ -0.78
YSR3YKR053C SWC4P53201 476 aa10.19□□□□□ -0.78
YSR3YKR053C CPR6P53691 371 aaKnown RBP10.19□□□□□ -0.78
YSR3YKR053C SNO2P53823 222 aa10.19□□□□□ -0.78
YSR3YKR053C EFM6P53970 246 aa10.19□□□□□ -0.78
YSR3YKR053C YDR132CQ03900 495 aa10.19□□□□□ -0.78
YSR3YKR053C ATG10Q07879 167 aa10.19□□□□□ -0.78
YSR3YKR053C RPN8Q08723 338 aaKnown RBP10.19□□□□□ -0.78
YSR3YKR053C SRO7Q12038 1033 aa10.19□□□□□ -0.78
YSR3YKR053C TGL5Q12043 749 aa10.19□□□□□ -0.78
YSR3YKR053C LDB17Q12342 491 aa10.19□□□□□ -0.78
YSR3YKR053C YLR149CQ99296 730 aa10.19□□□□□ -0.78
YSR3YKR053C MPH2P0CD99 609 aa10.18□□□□□ -0.78
YSR3YKR053C YKR104WP0CE69 306 aa10.18□□□□□ -0.78
YSR3YKR053C GAL11P19659 1081 aa10.18□□□□□ -0.78
YSR3YKR053C CIN8P27895 1000 aa10.18□□□□□ -0.78
YSR3YKR053C SRP72P38688 640 aaKnown RBP10.18□□□□□ -0.78
YSR3YKR053C SMF2P38778 549 aa10.18□□□□□ -0.78
YSR3YKR053C CCT4P39078 528 aaKnown RBP10.18□□□□□ -0.78
YSR3YKR053C RGI2P40188 164 aa10.18□□□□□ -0.78
YSR3YKR053C NMD5P46970 1048 aa10.18□□□□□ -0.78
YSR3YKR053C NBP35P52920 328 aa10.18□□□□□ -0.78
YSR3YKR053C SLU7Q02775 382 aaKnown RBP10.18□□□□□ -0.78
YSR3YKR053C HAA1Q12753 694 aaKnown RBP10.18□□□□□ -0.78
YSR3YKR053C SEN1Q00416 2231 aaKnown RBP10.17□□□□□ -0.78
YSR3YKR053C INH1P01097 85 aa10.17□□□□□ -0.78
YSR3YKR053C ERG6P25087 383 aaKnown RBP10.17□□□□□ -0.78
YSR3YKR053C GID7P25569 745 aa10.17□□□□□ -0.78
YSR3YKR053C MGT1P26188 188 aa10.17□□□□□ -0.78
YSR3YKR053C DPB3P27344 201 aa10.17□□□□□ -0.78
YSR3YKR053C PLC1P32383 869 aa10.17□□□□□ -0.78
YSR3YKR053C IMP3P32899 183 aaPredicted RBP10.17□□□□□ -0.78
YSR3YKR053C UBC6P33296 250 aaPredicted RBP10.17□□□□□ -0.78
YSR3YKR053C PEX5P35056 612 aa10.17□□□□□ -0.78
YSR3YKR053C PHO11P35842 467 aa10.17□□□□□ -0.78
YSR3YKR053C BYE1P36106 594 aa10.17□□□□□ -0.78
YSR3YKR053C PHO12P38693 467 aa10.17□□□□□ -0.78
YSR3YKR053C YPT35P38815 214 aaKnown RBP10.17□□□□□ -0.78
YSR3YKR053C TES1P41903 349 aaKnown RBP10.17□□□□□ -0.78
YSR3YKR053C TAH11P47112 604 aa10.17□□□□□ -0.78
YSR3YKR053C NOP15P53927 220 aaPredicted RBP10.17□□□□□ -0.78
YSR3YKR053C SWS2P53937 143 aa10.17□□□□□ -0.78
YSR3YKR053C TGL2P54857 326 aa10.17□□□□□ -0.78
YSR3YKR053C CIA1Q05583 330 aa10.17□□□□□ -0.78
YSR3YKR053C OPT2Q06593 877 aa10.17□□□□□ -0.78
YSR3YKR053C YFT2Q06676 274 aa10.17□□□□□ -0.78
YSR3YKR053C ADY3Q07732 790 aa10.17□□□□□ -0.78
YSR3YKR053C GCR1P07261 785 aa10.16□□□□□ -0.78
YSR3YKR053C APA1P16550 321 aaKnown RBP10.16□□□□□ -0.78
YSR3YKR053C SNT1P25357 1226 aa10.16□□□□□ -0.78
YSR3YKR053C SPS19P32573 292 aaKnown RBP10.16□□□□□ -0.78
YSR3YKR053C CNS1P33313 385 aa10.16□□□□□ -0.78
YSR3YKR053C YBR259WP38338 688 aa10.16□□□□□ -0.78
YSR3YKR053C REI1P38344 393 aaPredicted RBP10.16□□□□□ -0.78
YSR3YKR053C RRP3P38712 501 aaKnown RBP10.16□□□□□ -0.78
YSR3YKR053C TRM82Q03774 444 aa10.16□□□□□ -0.78
YSR3YKR053C RTT10Q08924 1013 aa10.16□□□□□ -0.78
YSR3YKR053C RTK1Q12100 620 aaPredicted RBP10.16□□□□□ -0.78
YSR3YKR053C RIO1Q12196 484 aaKnown RBP10.16□□□□□ -0.78
YSR3YKR053C CCT6P39079 546 aa10.15□□□□□ -0.78
YSR3YKR053C SLX8P40072 274 aa10.15□□□□□ -0.78
YSR3YKR053C YFR018CP43599 363 aa10.15□□□□□ -0.78
YSR3YKR053C YGL108CP53139 140 aa10.15□□□□□ -0.78
YSR3YKR053C MAL13P53338 473 aa10.15□□□□□ -0.78
YSR3YKR053C SBP1P10080 294 aaKnown RBP10.14□□□□□ -0.79
YSR3YKR053C PEP5P12868 1029 aa10.14□□□□□ -0.79
YSR3YKR053C SPO16P17122 198 aa10.14□□□□□ -0.79
YSR3YKR053C HSP60P19882 572 aaKnown RBP10.14□□□□□ -0.79
YSR3YKR053C EPT1P22140 391 aa10.14□□□□□ -0.79
YSR3YKR053C MAK5P38112 773 aaPredicted RBP10.14□□□□□ -0.79
YSR3YKR053C LDB7P38210 180 aa10.14□□□□□ -0.79
YSR3YKR053C MUM2P38236 366 aa10.14□□□□□ -0.79
YSR3YKR053C UBP14P38237 781 aaKnown RBP10.14□□□□□ -0.79
YSR3YKR053C IML3P38265 245 aa10.14□□□□□ -0.79
YSR3YKR053C GND1P38720 489 aaKnown RBP10.14□□□□□ -0.79
YSR3YKR053C YPS6P40583 537 aa10.14□□□□□ -0.79
YSR3YKR053C PXA1P41909 870 aa10.14□□□□□ -0.79
YSR3YKR053C TRS31Q03337 283 aa10.14□□□□□ -0.79
YSR3YKR053C ARG7Q04728 441 aa10.14□□□□□ -0.79
YSR3YKR053C ACM1Q08981 209 aa10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms