RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C NOG2P53742 486 aaKnown RBP3.62□□□□□ -1.83
VPS53YJL029C YNL143CP53908 130 aa3.62□□□□□ -1.83
VPS53YJL029C RSC4Q02206 625 aa3.62□□□□□ -1.83
VPS53YJL029C SMA1Q02651 245 aa3.62□□□□□ -1.83
VPS53YJL029C RLI1Q03195 608 aaKnown RBP3.62□□□□□ -1.83
VPS53YJL029C YMR178WQ03219 274 aaKnown RBP3.62□□□□□ -1.83
VPS53YJL029C POB3Q04636 552 aaKnown RBP3.62□□□□□ -1.83
VPS53YJL029C PEX15Q08215 383 aa3.62□□□□□ -1.83
VPS53YJL029C APL4Q12028 832 aa3.62□□□□□ -1.83
VPS53YJL029C AVL9Q12500 764 aa3.62□□□□□ -1.83
VPS53YJL029C LSO1Q3E827 93 aa3.62□□□□□ -1.83
VPS53YJL029C TOR2P32600 2474 aaKnown RBP3.61□□□□□ -1.83
VPS53YJL029C SUC2P00724 532 aa3.61□□□□□ -1.83
VPS53YJL029C RAD3P06839 778 aa3.61□□□□□ -1.83
VPS53YJL029C SEC63P14906 663 aa3.61□□□□□ -1.83
VPS53YJL029C YCR015CP25616 317 aa3.61□□□□□ -1.83
VPS53YJL029C GUT2P32191 649 aa3.61□□□□□ -1.83
VPS53YJL029C MUM2P38236 366 aa3.61□□□□□ -1.83
VPS53YJL029C OTU2P38747 307 aaKnown RBP3.61□□□□□ -1.83
VPS53YJL029C PPE1P38796 400 aa3.61□□□□□ -1.83
VPS53YJL029C YPT35P38815 214 aaKnown RBP3.61□□□□□ -1.83
VPS53YJL029C PFS1P38872 237 aa3.61□□□□□ -1.83
VPS53YJL029C GIP4P39732 760 aa3.61□□□□□ -1.83
VPS53YJL029C LCP5P40079 357 aaPredicted RBP3.61□□□□□ -1.83
VPS53YJL029C DSN1P40568 576 aa3.61□□□□□ -1.83
VPS53YJL029C YML6P51998 286 aa3.61□□□□□ -1.83
VPS53YJL029C MNT2P53059 558 aa3.61□□□□□ -1.83
VPS53YJL029C MTO1P53070 669 aa3.61□□□□□ -1.83
VPS53YJL029C DOS2P54858 310 aa3.61□□□□□ -1.83
VPS53YJL029C CDC14Q00684 551 aa3.61□□□□□ -1.83
VPS53YJL029C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
VPS53YJL029C YKR104WP0CE69 306 aa3.61□□□□□ -1.83
VPS53YJL029C ERG6P25087 383 aaKnown RBP3.61□□□□□ -1.83
VPS53YJL029C VAC17P25591 423 aa3.61□□□□□ -1.83
VPS53YJL029C BRF1P29056 596 aa3.61□□□□□ -1.83
VPS53YJL029C SRP101P32916 621 aa3.61□□□□□ -1.83
VPS53YJL029C CTF13P35203 478 aa3.61□□□□□ -1.83
VPS53YJL029C CKB2P38930 258 aa3.61□□□□□ -1.83
VPS53YJL029C END3P39013 349 aa3.61□□□□□ -1.83
VPS53YJL029C FLC2P39719 783 aa3.61□□□□□ -1.83
VPS53YJL029C YJL070CP40361 888 aa3.61□□□□□ -1.83
VPS53YJL029C FET5P43561 622 aa3.61□□□□□ -1.83
VPS53YJL029C YFR018CP43599 363 aa3.61□□□□□ -1.83
VPS53YJL029C CNN1P43618 361 aa3.61□□□□□ -1.83
VPS53YJL029C EFM6P53970 246 aa3.61□□□□□ -1.83
VPS53YJL029C VAC14Q06708 880 aa3.61□□□□□ -1.83
VPS53YJL029C RPN8Q08723 338 aaKnown RBP3.61□□□□□ -1.83
VPS53YJL029C PIN2Q12057 282 aa3.61□□□□□ -1.83
VPS53YJL029C MOD5P07884 428 aa3.6□□□□□ -1.83
VPS53YJL029C SBP1P10080 294 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C APA1P16550 321 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C PMA2P19657 947 aa3.6□□□□□ -1.83
VPS53YJL029C SNT1P25357 1226 aa3.6□□□□□ -1.83
VPS53YJL029C PMI40P29952 429 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C SPC42P36094 363 aa3.6□□□□□ -1.83
VPS53YJL029C SRP72P38688 640 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C CAJ1P39101 391 aa3.6□□□□□ -1.83
VPS53YJL029C SAW1P39735 261 aa3.6□□□□□ -1.83
VPS53YJL029C YAT2P40017 923 aa3.6□□□□□ -1.83
VPS53YJL029C MAD1P40957 749 aa3.6□□□□□ -1.83
VPS53YJL029C BRO1P48582 844 aa3.6□□□□□ -1.83
VPS53YJL029C RTA1P53047 317 aa3.6□□□□□ -1.83
VPS53YJL029C YGL108CP53139 140 aa3.6□□□□□ -1.83
VPS53YJL029C NRD1P53617 575 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
VPS53YJL029C AQR1P53943 586 aa3.6□□□□□ -1.83
VPS53YJL029C SIW14P53965 281 aa3.6□□□□□ -1.83
VPS53YJL029C BET4Q00618 327 aa3.6□□□□□ -1.83
VPS53YJL029C INA17Q02888 182 aa3.6□□□□□ -1.83
VPS53YJL029C GSF2Q04697 403 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C OPT2Q06593 877 aa3.6□□□□□ -1.83
VPS53YJL029C PUN1Q06991 263 aa3.6□□□□□ -1.83
VPS53YJL029C GTT2Q12390 233 aa3.6□□□□□ -1.83
VPS53YJL029C OCA6Q12454 224 aa3.6□□□□□ -1.83
VPS53YJL029C QCR6P00127 147 aa3.6□□□□□ -1.83
VPS53YJL029C IMA3P0CW40 589 aa3.6□□□□□ -1.83
VPS53YJL029C IMA4P0CW41 589 aa3.6□□□□□ -1.83
VPS53YJL029C SMI1P32566 505 aa3.6□□□□□ -1.83
VPS53YJL029C RML2P32611 393 aa3.6□□□□□ -1.83
VPS53YJL029C YEL043WP32618 956 aa3.6□□□□□ -1.83
VPS53YJL029C UTH1P36135 365 aa3.6□□□□□ -1.83
VPS53YJL029C YER158CP40095 573 aa3.6□□□□□ -1.83
VPS53YJL029C ATM1P40416 690 aa3.6□□□□□ -1.83
VPS53YJL029C DPH1P40487 425 aaKnown RBP3.6□□□□□ -1.83
VPS53YJL029C SER33P40510 469 aa3.6□□□□□ -1.83
VPS53YJL029C RTS3P53289 263 aa3.6□□□□□ -1.83
VPS53YJL029C NOP15P53927 220 aaPredicted RBP3.6□□□□□ -1.83
VPS53YJL029C SML1Q04964 104 aa3.6□□□□□ -1.83
VPS53YJL029C MCP2Q06567 569 aa3.6□□□□□ -1.83
VPS53YJL029C YLR001CQ07895 862 aa3.6□□□□□ -1.83
VPS53YJL029C IMA2Q08295 589 aa3.6□□□□□ -1.83
VPS53YJL029C MDM35O60200 86 aa3.59□□□□□ -1.83
VPS53YJL029C SEM1O94742 89 aa3.59□□□□□ -1.83
VPS53YJL029C RAD10P06838 210 aa3.59□□□□□ -1.83
VPS53YJL029C CLC1P17891 233 aa3.59□□□□□ -1.83
VPS53YJL029C ACO1P19414 778 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
VPS53YJL029C HSP60P19882 572 aaKnown RBP3.59□□□□□ -1.83
VPS53YJL029C UBA1P22515 1024 aaKnown RBP3.59□□□□□ -1.83
VPS53YJL029C YSP3P25036 478 aa3.59□□□□□ -1.83
VPS53YJL029C PLC1P32383 869 aa3.59□□□□□ -1.83
VPS53YJL029C AEP1P32493 518 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 100.1 ms