RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YML053CQ04978 212 aa2.37□□□□□ -2.03
SMD1YGR074W STP3Q05937 343 aa2.37□□□□□ -2.03
SMD1YGR074W YDL242WQ07746 117 aa2.37□□□□□ -2.03
SMD1YGR074W YOR389WQ08912 624 aa2.37□□□□□ -2.03
SMD1YGR074W TCO89Q08921 799 aa2.37□□□□□ -2.03
SMD1YGR074W YPL191CQ08930 360 aa2.37□□□□□ -2.03
SMD1YGR074W MED1Q12321 566 aa2.37□□□□□ -2.03
SMD1YGR074W PCD1Q12524 340 aa2.37□□□□□ -2.03
SMD1YGR074W COX1P00401 534 aa2.36□□□□□ -2.03
SMD1YGR074W ADE5,7P07244 802 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W SUI3P09064 285 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W HEM1P09950 548 aaPredicted RBP2.36□□□□□ -2.03
SMD1YGR074W ERG8P24521 451 aa2.36□□□□□ -2.03
SMD1YGR074W PEP3P27801 918 aa2.36□□□□□ -2.03
SMD1YGR074W GDA1P32621 518 aa2.36□□□□□ -2.03
SMD1YGR074W UGP1P32861 499 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W RGT1P32862 1170 aa2.36□□□□□ -2.03
SMD1YGR074W LHS1P36016 881 aa2.36□□□□□ -2.03
SMD1YGR074W YPT10P38146 199 aa2.36□□□□□ -2.03
SMD1YGR074W RTS1P38903 757 aa2.36□□□□□ -2.03
SMD1YGR074W MRX1P40050 688 aa2.36□□□□□ -2.03
SMD1YGR074W NDE1P40215 560 aa2.36□□□□□ -2.03
SMD1YGR074W CCT7P42943 550 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W SRB7P47822 140 aa2.36□□□□□ -2.03
SMD1YGR074W ASN1P49089 572 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W RRT6P53117 311 aaPredicted RBP2.36□□□□□ -2.03
SMD1YGR074W RBG2P53295 368 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W RPT6Q01939 405 aaKnown RBP2.36□□□□□ -2.03
SMD1YGR074W MUB1Q03162 620 aa2.36□□□□□ -2.03
SMD1YGR074W PLM2Q04383 521 aa2.36□□□□□ -2.03
SMD1YGR074W ARG7Q04728 441 aa2.36□□□□□ -2.03
SMD1YGR074W BAG7Q12128 409 aa2.36□□□□□ -2.03
SMD1YGR074W YBR126W-AQ8TGU7 68 aa2.36□□□□□ -2.03
SMD1YGR074W AI5_ALPHAQ9ZZX1 630 aa2.36□□□□□ -2.03
SMD1YGR074W YBR085C-AO43137 85 aa2.35□□□□□ -2.03
SMD1YGR074W SEM1O94742 89 aa2.35□□□□□ -2.03
SMD1YGR074W RPL7AP05737 244 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W HOM2P13663 365 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W AMD2P22580 549 aa2.35□□□□□ -2.03
SMD1YGR074W PTP1P25044 335 aa2.35□□□□□ -2.03
SMD1YGR074W YUR1P26725 428 aa2.35□□□□□ -2.03
SMD1YGR074W CMK1P27466 446 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W MRP20P32387 263 aa2.35□□□□□ -2.03
SMD1YGR074W SAC6P32599 642 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W RPC34P32910 317 aa2.35□□□□□ -2.03
SMD1YGR074W SOF1P33750 489 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W HES1P35843 434 aa2.35□□□□□ -2.03
SMD1YGR074W UBS1P38290 277 aa2.35□□□□□ -2.03
SMD1YGR074W VBA2P38358 474 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W AFG3P39925 761 aa2.35□□□□□ -2.03
SMD1YGR074W SAP1P39955 897 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W YEL020CP39994 560 aa2.35□□□□□ -2.03
SMD1YGR074W SLZ1P40167 298 aa2.35□□□□□ -2.03
SMD1YGR074W ASG1P40467 964 aa2.35□□□□□ -2.03
SMD1YGR074W YFL015CP43578 164 aa2.35□□□□□ -2.03
SMD1YGR074W RMD8P43620 662 aa2.35□□□□□ -2.03
SMD1YGR074W YGL117WP53133 265 aa2.35□□□□□ -2.03
SMD1YGR074W FMP30Q02883 468 aa2.35□□□□□ -2.03
SMD1YGR074W SEG1Q04279 960 aa2.35□□□□□ -2.03
SMD1YGR074W ARP9Q05123 467 aa2.35□□□□□ -2.03
SMD1YGR074W TFC6Q06339 672 aa2.35□□□□□ -2.03
SMD1YGR074W CRN1Q06440 651 aa2.35□□□□□ -2.03
SMD1YGR074W SWA2Q06677 668 aa2.35□□□□□ -2.03
SMD1YGR074W TAH18Q12181 623 aa2.35□□□□□ -2.03
SMD1YGR074W RPL7BQ12213 244 aaKnown RBP2.35□□□□□ -2.03
SMD1YGR074W GCN4P03069 281 aa2.34□□□□□ -2.03
SMD1YGR074W HXK2P04807 486 aaKnown RBP2.34□□□□□ -2.03
SMD1YGR074W RPB2P08518 1224 aaKnown RBP2.34□□□□□ -2.03
SMD1YGR074W SPE2P21182 396 aa2.34□□□□□ -2.03
SMD1YGR074W PGS1P25578 521 aa2.34□□□□□ -2.03
SMD1YGR074W PTC6P25646 442 aa2.34□□□□□ -2.03
SMD1YGR074W RFA2P26754 273 aaKnown RBP2.34□□□□□ -2.03
SMD1YGR074W MSS51P32335 436 aa2.34□□□□□ -2.03
SMD1YGR074W SRB5P32585 307 aa2.34□□□□□ -2.03
SMD1YGR074W ALY1P36117 915 aa2.34□□□□□ -2.03
SMD1YGR074W AGP2P38090 596 aa2.34□□□□□ -2.03
SMD1YGR074W APD1P38281 316 aa2.34□□□□□ -2.03
SMD1YGR074W VPS8P39702 1274 aa2.34□□□□□ -2.03
SMD1YGR074W BUD16P39988 312 aa2.34□□□□□ -2.03
SMD1YGR074W MIT1P40002 666 aa2.34□□□□□ -2.03
SMD1YGR074W ARF3P40994 183 aaRIP-Chip data2.34□□□□□ -2.03not detected
SMD1YGR074W YJL043WP47053 257 aa2.34□□□□□ -2.03
SMD1YGR074W NPA3P47122 385 aa2.34□□□□□ -2.03
SMD1YGR074W AAD10P47182 288 aa2.34□□□□□ -2.03
SMD1YGR074W MRK1P50873 501 aa2.34□□□□□ -2.03
SMD1YGR074W YAT1P80235 687 aa2.34□□□□□ -2.03
SMD1YGR074W YML119WQ03208 357 aa2.34□□□□□ -2.03
SMD1YGR074W RAD30Q04049 632 aa2.34□□□□□ -2.03
SMD1YGR074W RAD33Q04231 177 aa2.34□□□□□ -2.03
SMD1YGR074W SKG3Q06315 1026 aa2.34□□□□□ -2.03
SMD1YGR074W PSR1Q07800 427 aa2.34□□□□□ -2.03
SMD1YGR074W ENT4Q07872 247 aa2.34□□□□□ -2.03
SMD1YGR074W RCN2Q12044 265 aa2.34□□□□□ -2.03
SMD1YGR074W ULA1Q12059 462 aa2.34□□□□□ -2.03
SMD1YGR074W LCB4Q12246 624 aa2.34□□□□□ -2.03
SMD1YGR074W VCX1Q99385 411 aa2.34□□□□□ -2.03
SMD1YGR074W CDC31P06704 161 aaKnown RBP2.33□□□□□ -2.04
SMD1YGR074W YML003WP0CF16 290 aa2.33□□□□□ -2.04
SMD1YGR074W MRP2P10663 115 aaPredicted RBP2.33□□□□□ -2.04
SMD1YGR074W PMA2P19657 947 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms