RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB7, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB7	YDR308C	SWA2	Q06677	668 aa		4.11	□□□□□ -1.75
SRB7	YDR308C	CSR1	Q06705	408 aa	Known RBP	4.11	□□□□□ -1.75
SRB7	YDR308C	RGT2	Q12300	763 aa		4.11	□□□□□ -1.75
SRB7	YDR308C	RPT3	P33298	428 aa	Known RBP	4.1	□□□□□ -1.75
SRB7	YDR308C	SNM1	P40993	198 aa		4.1	□□□□□ -1.75
SRB7	YDR308C	ECM22	Q05958	814 aa	Predicted RBP	4.1	□□□□□ -1.75
SRB7	YDR308C	YLR049C	Q12110	428 aa		4.1	□□□□□ -1.75
SRB7	YDR308C	BAG7	Q12128	409 aa		4.1	□□□□□ -1.75
SRB7	YDR308C	UBC1	P21734	215 aa	Known RBP	4.09	□□□□□ -1.75
SRB7	YDR308C	CNS1	P33313	385 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	IFA38	P38286	347 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	IST3	P40565	148 aa	Predicted RBP	4.09	□□□□□ -1.75
SRB7	YDR308C	IML2	P47031	731 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	YPR003C	P53394	754 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	DCP2	P53550	970 aa	Known RBP	4.09	□□□□□ -1.75
SRB7	YDR308C	GTR1	Q00582	310 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	PDR8	Q06149	701 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	VAM6	Q07468	1049 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	TMA16	Q08687	178 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	GET3	Q12154	354 aa	Known RBP	4.09	□□□□□ -1.75
SRB7	YDR308C	HER1	Q12276	1246 aa		4.09	□□□□□ -1.75
SRB7	YDR308C	ERG27	Q12452	347 aa	Known RBP	4.09	□□□□□ -1.75
SRB7	YDR308C	TY2A-LR1	P0C2J4	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-F	P0CX61	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-GR2	P0CX62	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	MRP2	P10663	115 aa	Predicted RBP	4.08	□□□□□ -1.76
SRB7	YDR308C	MTF2	P10849	440 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	YCR006C	P25350	157 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-C	P25383	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	XRS2	P33301	854 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	YMR124W	P39523	943 aa	Known RBP	4.08	□□□□□ -1.76
SRB7	YDR308C	BUD16	P39988	312 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	UBP7	P40453	1071 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	CFD1	P40558	293 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	MSY1	P48527	492 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-DR2	Q03483	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	CIA1	Q05583	330 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-B	Q12260	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-OR2	Q12293	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	ICT1	Q12385	394 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-DR1	Q12392	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-OR1	Q12439	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	RRI1	Q12468	440 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	TY2A-DR3	Q99303	438 aa		4.08	□□□□□ -1.76
SRB7	YDR308C	YLR302C	O13544	120 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	YPR089W	O13585	888 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	PWP2	P25635	923 aa	Known RBP	4.07	□□□□□ -1.76
SRB7	YDR308C	TMT1	P32643	299 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	VPS24	P36095	224 aa	Known RBP	4.07	□□□□□ -1.76
SRB7	YDR308C	PSY4	P38193	441 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	YIR016W	P40572	265 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	MRPL1	Q04599	285 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	CRN1	Q06440	651 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	PSR2	Q07949	397 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	MCH4	Q08268	501 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	PCD1	Q12524	340 aa		4.07	□□□□□ -1.76
SRB7	YDR308C	YML003W	P0CF16	290 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	CDC15	P27636	974 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	ECM32	P32644	1121 aa	Known RBP	4.06	□□□□□ -1.76
SRB7	YDR308C	SLC1	P33333	303 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	FUI1	P38196	639 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	ARN1	P38731	627 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	SPC97	P38863	823 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	MRX1	P40050	688 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	PFK26	P40433	827 aa	Known RBP	4.06	□□□□□ -1.76
SRB7	YDR308C	PCI8	P40512	444 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	YJL107C	P42947	387 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	VPS25	P47142	202 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	YPT11	P48559	417 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	SCW4	P53334	386 aa	Known RBP	4.06	□□□□□ -1.76
SRB7	YDR308C	MPS1	P54199	764 aa		4.06	□□□□□ -1.76
SRB7	YDR308C	SOF1	P33750	489 aa	Known RBP	4.05	□□□□□ -1.76
SRB7	YDR308C	TFC3	P34111	1160 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	OCT1	P35999	772 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	EXO84	P38261	753 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	RIC1	P40395	1056 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	UBP8	P50102	471 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	REG1	Q00816	1014 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	PFA5	Q03289	374 aa		4.05	□□□□□ -1.76
SRB7	YDR308C	GAL4	P04386	881 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	CNA1	P23287	553 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	ADE17	P38009	592 aa	Known RBP	4.04	□□□□□ -1.76
SRB7	YDR308C	KTR3	P38130	404 aa	Predicted RBP	4.04	□□□□□ -1.76
SRB7	YDR308C	UBP13	P38187	747 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	KAP123	P40069	1113 aa	Known RBP	4.04	□□□□□ -1.76
SRB7	YDR308C	VRG4	P40107	337 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	CTF18	P49956	741 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	YGR021W	P53212	290 aa		4.04	□□□□□ -1.76
SRB7	YDR308C	CSL4	P53859	292 aa	Predicted RBP	4.04	□□□□□ -1.76
SRB7	YDR308C	DPB3	P27344	201 aa		4.03	□□□□□ -1.76
SRB7	YDR308C	IES5	P40060	125 aa		4.03	□□□□□ -1.76
SRB7	YDR308C	PSP1	P50896	841 aa	Known RBP	4.03	□□□□□ -1.76
SRB7	YDR308C	YGL036W	P53185	909 aa	Predicted RBP	4.03	□□□□□ -1.76
SRB7	YDR308C	VTC3	Q02725	835 aa		4.03	□□□□□ -1.76
SRB7	YDR308C	VID22	Q05934	901 aa		4.03	□□□□□ -1.76
SRB7	YDR308C	GEP3	Q08622	556 aa		4.03	□□□□□ -1.76
SRB7	YDR308C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SRB7	YDR308C	SNF1	P06782	633 aa	Known RBP	4.02	□□□□□ -1.77
SRB7	YDR308C	PCT1	P13259	424 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms