RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	TFC3	P34111	1160 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	PFK26	P40433	827 aa	Known RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	DCP2	P53550	970 aa	Known RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	FCP1	Q03254	732 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	TFC6	Q06339	672 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	TPO3	Q06451	622 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	SPN1	Q06505	410 aa	Predicted RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	BSP1	Q06604	576 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	BUD21	Q08492	214 aa	Predicted RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	LEA1	Q08963	238 aa	Predicted RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	YNL162W-A	Q3E7A8	72 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	URE2	P23202	354 aa	Known RBP	5.06	□□□□□ -1.6
NSE3	YDR288W	FTH1	P38310	465 aa		5.06	□□□□□ -1.6
NSE3	YDR288W	AXL2	P38928	823 aa		5.06	□□□□□ -1.6
NSE3	YDR288W	ADE16	P54113	591 aa	Known RBP	5.06	□□□□□ -1.6
NSE3	YDR288W	SWA2	Q06677	668 aa		5.06	□□□□□ -1.6
NSE3	YDR288W	YDL121C	Q07541	149 aa		5.06	□□□□□ -1.6
NSE3	YDR288W	ILS1	P09436	1072 aa	Known RBP	5.05	□□□□□ -1.6
NSE3	YDR288W	MSS51	P32335	436 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	MCM10	P32354	571 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	ASG1	P40467	964 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	MSY1	P48527	492 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	YRB30	P53107	440 aa	Predicted RBP	5.05	□□□□□ -1.6
NSE3	YDR288W	SNO4	Q04902	237 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	COQ11	Q05892	277 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	THI7	Q05998	598 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	CRN1	Q06440	651 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	HSP33	Q08914	237 aa	Known RBP	5.05	□□□□□ -1.6
NSE3	YDR288W	HSP32	Q08992	237 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	NKP1	Q12493	238 aa		5.05	□□□□□ -1.6
NSE3	YDR288W	APN1	P22936	367 aa		5.04	□□□□□ -1.6
NSE3	YDR288W	GFD2	P25370	566 aa	Known RBP	5.04	□□□□□ -1.6
NSE3	YDR288W	CHS3	P29465	1165 aa		5.04	□□□□□ -1.6
NSE3	YDR288W	KTR3	P38130	404 aa	Predicted RBP	5.04	□□□□□ -1.6
NSE3	YDR288W	BPL1	P48445	690 aa	Predicted RBP	5.04	□□□□□ -1.6
NSE3	YDR288W	SNU56	Q03782	492 aa	Known RBP	5.04	□□□□□ -1.6
NSE3	YDR288W	THI3	Q07471	609 aa		5.04	□□□□□ -1.6
NSE3	YDR288W	LYS21	Q12122	440 aa	Known RBP	5.04	□□□□□ -1.6
NSE3	YDR288W	ERG8	P24521	451 aa		5.03	□□□□□ -1.6
NSE3	YDR288W	UBP7	P40453	1071 aa		5.03	□□□□□ -1.6
NSE3	YDR288W	VPS4	P52917	437 aa		5.03	□□□□□ -1.6
NSE3	YDR288W	MEP3	P53390	489 aa		5.03	□□□□□ -1.6
NSE3	YDR288W	RAD34	Q06665	692 aa		5.03	□□□□□ -1.6
NSE3	YDR288W	CET1	O13297	549 aa	Predicted RBP	5.02	□□□□□ -1.61
NSE3	YDR288W	PGK1	P00560	416 aa	Known RBP	5.02	□□□□□ -1.61
NSE3	YDR288W	FUM1	P08417	488 aa	Known RBP	5.02	□□□□□ -1.61
NSE3	YDR288W	GSH1	P32477	678 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	SRB5	P32585	307 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	LHS1	P36016	881 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	IMD2	P38697	523 aa	Known RBP	5.02	□□□□□ -1.61
NSE3	YDR288W	MRX1	P40050	688 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	SNO3	P43544	222 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	IMD3	P50095	523 aa	Known RBP	5.02	□□□□□ -1.61
NSE3	YDR288W	ORC5	P50874	479 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	SEG1	Q04279	960 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	RCO1	Q04779	684 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	SKM1	Q12469	655 aa		5.02	□□□□□ -1.61
NSE3	YDR288W	PRE8	P23639	250 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	SOF1	P33750	489 aa	Known RBP	5.01	□□□□□ -1.61
NSE3	YDR288W	PSD1	P39006	500 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	YJR061W	P40355	935 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	CIN1	P40987	1014 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	IRC7	P43623	340 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	BSC5	P53755	489 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	ENT1	Q12518	454 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	YLR111W	Q12528	110 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	VCX1	Q99385	411 aa		5.01	□□□□□ -1.61
NSE3	YDR288W	MRP2	P10663	115 aa	Predicted RBP	5	□□□□□ -1.61
NSE3	YDR288W	MAK32	P23060	363 aa		5	□□□□□ -1.61
NSE3	YDR288W	MRP20	P32387	263 aa		5	□□□□□ -1.61
NSE3	YDR288W	GEX2	P36173	615 aa		5	□□□□□ -1.61
NSE3	YDR288W	TMA108	P40462	946 aa		5	□□□□□ -1.61
NSE3	YDR288W	MNT3	P40549	630 aa		5	□□□□□ -1.61
NSE3	YDR288W	NMD5	P46970	1048 aa		5	□□□□□ -1.61
NSE3	YDR288W	ERG13	P54839	491 aa	Known RBP	5	□□□□□ -1.61
NSE3	YDR288W	RIM13	Q03792	727 aa		5	□□□□□ -1.61
NSE3	YDR288W	YLR049C	Q12110	428 aa		5	□□□□□ -1.61
NSE3	YDR288W	YOL087C	Q99247	1116 aa		5	□□□□□ -1.61
NSE3	YDR288W	YOR019W	Q99248	730 aa		5	□□□□□ -1.61
NSE3	YDR288W	RPB2	P08518	1224 aa	Known RBP	4.99	□□□□□ -1.61
NSE3	YDR288W	YSP3	P25036	478 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	CBF2	P32504	956 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
NSE3	YDR288W	YEL068C	P39977	110 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	PHM8	P40025	321 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	DPH1	P40487	425 aa	Known RBP	4.99	□□□□□ -1.61
NSE3	YDR288W	XBP1	P40489	647 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	IME4	P41833	600 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	YPR003C	P53394	754 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	IDP3	P53982	420 aa	Known RBP	4.99	□□□□□ -1.61
NSE3	YDR288W	SVL3	Q03088	825 aa	Known RBP	4.99	□□□□□ -1.61
NSE3	YDR288W	VPS72	Q03388	795 aa		4.99	□□□□□ -1.61
NSE3	YDR288W	YBR085C-A	O43137	85 aa		4.98	□□□□□ -1.61
NSE3	YDR288W	YCR006C	P25350	157 aa		4.98	□□□□□ -1.61
NSE3	YDR288W	ALY1	P36117	915 aa		4.98	□□□□□ -1.61
NSE3	YDR288W	NTR2	P36118	322 aa	Predicted RBP	4.98	□□□□□ -1.61
NSE3	YDR288W	AAP1	P37898	856 aa	Known RBP	4.98	□□□□□ -1.61
NSE3	YDR288W	ADE17	P38009	592 aa	Known RBP	4.98	□□□□□ -1.61
NSE3	YDR288W	SEC31	P38968	1273 aa	Known RBP	4.98	□□□□□ -1.61
NSE3	YDR288W	ERV46	P39727	415 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms