RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Lrp1Q91ZX7 4545 aaKnown RBP3.43□□□□□ -1.86
Csde1-206ENSMUST00000197488 Gm5965D3Z724 196 aa3.42□□□□□ -1.86
Csde1-206ENSMUST00000197488 Mp68P56379 58 aa3.42□□□□□ -1.86
Csde1-206ENSMUST00000197488 Ryr3A2AGL3 4863 aa3.41□□□□□ -1.86
Csde1-206ENSMUST00000197488 Gm6217A0A1Y7VJK9 128 aa3.4□□□□□ -1.87
Csde1-206ENSMUST00000197488 SacsQ9JLC8 4582 aa3.4□□□□□ -1.87
Csde1-206ENSMUST00000197488 Dync1h1Q9JHU4 4644 aaKnown RBP3.39□□□□□ -1.87
Csde1-206ENSMUST00000197488 Fat1A0A1L1SQU7 4645 aa3.39□□□□□ -1.87
Csde1-206ENSMUST00000197488 Romo1P60603 79 aa3.38□□□□□ -1.87
Csde1-206ENSMUST00000197488 Rpl37Q9D823 97 aa3.38□□□□□ -1.87
Csde1-206ENSMUST00000197488 Fat2Q5F226 4351 aa3.38□□□□□ -1.87
Csde1-206ENSMUST00000197488 Rps29P62274 56 aa3.38□□□□□ -1.87
Csde1-206ENSMUST00000197488 Pkhd1E9PZ36 4059 aa3.37□□□□□ -1.87
Csde1-206ENSMUST00000197488 Ryr1E9PZQ0 5035 aa3.37□□□□□ -1.87
Csde1-206ENSMUST00000197488 Gm20538F6Z9R1 75 aa3.33□□□□□ -1.88
Csde1-206ENSMUST00000197488 Fat3Q8BNA6 4555 aa3.33□□□□□ -1.88
Csde1-206ENSMUST00000197488 Gm21887J3QQ04 176 aa3.32□□□□□ -1.88
Csde1-206ENSMUST00000197488 Pkhd1l1Q80ZA4 4249 aa3.31□□□□□ -1.88
Csde1-206ENSMUST00000197488 Mycbp2Q7TPH6 4711 aa3.3□□□□□ -1.88
Csde1-206ENSMUST00000197488 Krtap19-5O08632 62 aa3.29□□□□□ -1.88
Csde1-206ENSMUST00000197488 Krtap31-1Q9D644 177 aa3.29□□□□□ -1.88
Csde1-206ENSMUST00000197488 2310057N15RikQ9D6T8 200 aa3.27□□□□□ -1.89
Csde1-206ENSMUST00000197488 Gm19426M0QWC7 77 aa3.26□□□□□ -1.89
Csde1-206ENSMUST00000197488 Krtap3-1A2A591 98 aa3.23□□□□□ -1.89
Csde1-206ENSMUST00000197488 HydinQ80W93 5154 aa3.23□□□□□ -1.89
Csde1-206ENSMUST00000197488 Abca13Q5SSE9 5034 aa3.22□□□□□ -1.89
Csde1-206ENSMUST00000197488 Gm10318A0A1W2P728 225 aa3.21□□□□□ -1.9
Csde1-206ENSMUST00000197488 Ndufaf8A2AMZ4 74 aa3.2□□□□□ -1.9
Csde1-206ENSMUST00000197488 Lce1jD3YUU5 139 aa3.2□□□□□ -1.9
Csde1-206ENSMUST00000197488 Lce1hQ9D6R3 140 aa3.2□□□□□ -1.9
Csde1-206ENSMUST00000197488 BC029722A0A0N4SW31 51 aa3.2□□□□□ -1.9
Csde1-206ENSMUST00000197488 B930094E09RikQ8C4T2 136 aa3.19□□□□□ -1.9
Csde1-206ENSMUST00000197488 Spink7Q6IE32 76 aa3.18□□□□□ -1.9
Csde1-206ENSMUST00000197488 Gm18596A0A1W2P860 280 aa3.17□□□□□ -1.9
Csde1-206ENSMUST00000197488 Kmt2cQ8BRH4 4903 aa3.17□□□□□ -1.9
Csde1-206ENSMUST00000197488 Gm17416Q30KP4 66 aa3.17□□□□□ -1.9
Csde1-206ENSMUST00000197488 Lce1a1Q9CQH5 143 aa3.15□□□□□ -1.91
Csde1-206ENSMUST00000197488 Lce1gQ9D195 139 aa3.15□□□□□ -1.91
Csde1-206ENSMUST00000197488 Krtap13-1Q8K198 168 aa3.13□□□□□ -1.91
Csde1-206ENSMUST00000197488 Dnah8Q91XQ0 4731 aa3.13□□□□□ -1.91
Csde1-206ENSMUST00000197488 Crct1Q6PAI5 102 aa3.13□□□□□ -1.91
Csde1-206ENSMUST00000197488 Lrp2A2ARV4 4660 aa3.12□□□□□ -1.91
Csde1-206ENSMUST00000197488 Kiaa1109A2AAE1 5005 aa3.12□□□□□ -1.91
Csde1-206ENSMUST00000197488 Prm2P07978 107 aa3.11□□□□□ -1.91
Csde1-206ENSMUST00000197488 Ryr2E9Q401 4966 aaKnown RBP3.11□□□□□ -1.91
Csde1-206ENSMUST00000197488 Sec61bQ9CQS8 96 aaKnown RBP3.08□□□□□ -1.92
Csde1-206ENSMUST00000197488 Herc2Q4U2R1 4836 aa3.08□□□□□ -1.92
Csde1-206ENSMUST00000197488 Fam229aB2KGE5 128 aa3.07□□□□□ -1.92
Csde1-206ENSMUST00000197488 Krtap7-1Q9D3I6 87 aa3.05□□□□□ -1.92
Csde1-206ENSMUST00000197488 Camk2n1Q6QWF9 78 aa3.02□□□□□ -1.93
Csde1-206ENSMUST00000197488 Lce1bQ9D149 137 aa3.02□□□□□ -1.93
Csde1-206ENSMUST00000197488 A0A286YCP9 139 aa3.01□□□□□ -1.93
Csde1-206ENSMUST00000197488 Dnhd1D3Z2X2 4750 aa3□□□□□ -1.93
Csde1-206ENSMUST00000197488 PcloQ9QYX7 5068 aa2.95□□□□□ -1.94
Csde1-206ENSMUST00000197488 Lce1eQ9D139 143 aa2.94□□□□□ -1.94
Csde1-206ENSMUST00000197488 Krtap1-5A2A590 122 aa2.94□□□□□ -1.94
Csde1-206ENSMUST00000197488 Gm17402F6Z0L5 76 aa2.93□□□□□ -1.94
Csde1-206ENSMUST00000197488 Gm40193A0A1B0GT39 78 aa2.93□□□□□ -1.94
Csde1-206ENSMUST00000197488 Gm9112A2AI92 75 aa2.92□□□□□ -1.94
Csde1-206ENSMUST00000197488 Sprr2a3Q4KL71 83 aa2.91□□□□□ -1.94
Csde1-206ENSMUST00000197488 Sprr2a1Q9CQK8 83 aa2.91□□□□□ -1.94
Csde1-206ENSMUST00000197488 Lce1dQ9D731 133 aa2.91□□□□□ -1.94
Csde1-206ENSMUST00000197488 Krtap16-3Q8C1I6 86 aa2.89□□□□□ -1.95
Csde1-206ENSMUST00000197488 Gm11559Q9D3H7 191 aa2.88□□□□□ -1.95
Csde1-206ENSMUST00000197488 Birc6O88738 4882 aa2.86□□□□□ -1.95
Csde1-206ENSMUST00000197488 Herc1E9PZP8 4859 aa2.86□□□□□ -1.95
Csde1-206ENSMUST00000197488 Ubr4A2AN08 5180 aa2.85□□□□□ -1.95
Csde1-206ENSMUST00000197488 Lce1lQ9D1G7 135 aa2.84□□□□□ -1.95
Csde1-206ENSMUST00000197488 Fat4Q2PZL6 4981 aa2.83□□□□□ -1.96
Csde1-206ENSMUST00000197488 Krtap19-3Q925H6 87 aa2.81□□□□□ -1.96
Csde1-206ENSMUST00000197488 Krtap19-1Q925H2 87 aa2.81□□□□□ -1.96
Csde1-206ENSMUST00000197488 Krtap1-4Q3V2D6 188 aa2.81□□□□□ -1.96
Csde1-206ENSMUST00000197488 ZanO88799 5376 aa2.8□□□□□ -1.96
Csde1-206ENSMUST00000197488 LorP18165 486 aa2.79□□□□□ -1.96
Csde1-206ENSMUST00000197488 Tnp1P10856 55 aa2.78□□□□□ -1.96
Csde1-206ENSMUST00000197488 Mdn1A2ANY6 5589 aaKnown RBP2.77□□□□□ -1.97
Csde1-206ENSMUST00000197488 4932415D10RikA0A1W2P6U8 4986 aa2.72□□□□□ -1.97
Csde1-206ENSMUST00000197488 Rnf213E9Q555 5152 aaKnown RBP2.68□□□□□ -1.98
Csde1-206ENSMUST00000197488 Hmcn2A2AJ76 5100 aa2.68□□□□□ -1.98
Csde1-206ENSMUST00000197488 Krtap12-1Q9Z287 130 aa2.68□□□□□ -1.98
Csde1-206ENSMUST00000197488 Ush2AQ2QI47 5193 aa2.68□□□□□ -1.98
Csde1-206ENSMUST00000197488 Krtap17-1A2A5X6 109 aa2.67□□□□□ -1.98
Csde1-206ENSMUST00000197488 Krtap19-9aF8WH65 55 aa2.66□□□□□ -1.98
Csde1-206ENSMUST00000197488 Krtap9-5A2A5X3 358 aa2.66□□□□□ -1.98
Csde1-206ENSMUST00000197488 Krtap1-3A2A588 173 aa2.63□□□□□ -1.99
Csde1-206ENSMUST00000197488 Gm10100J3QK64 120 aa2.61□□□□□ -1.99
Csde1-206ENSMUST00000197488 Krtap9-3Q3V2C1 136 aa2.54□□□□□ -2
Csde1-206ENSMUST00000197488 Krtap19-9bQ99NG9 58 aa2.54□□□□□ -2
Csde1-206ENSMUST00000197488 Lce1iQ9D6P5 149 aa2.54□□□□□ -2
Csde1-206ENSMUST00000197488 Krtap8-1O08633 61 aa2.53□□□□□ -2
Csde1-206ENSMUST00000197488 Lce1a2Q9D1K4 149 aa2.53□□□□□ -2
Csde1-206ENSMUST00000197488 Gm7735D3YX18 52 aa2.51□□□□□ -2.01
Csde1-206ENSMUST00000197488 Krtap19-2Q925I0 141 aa2.49□□□□□ -2.01
Csde1-206ENSMUST00000197488 Prm1P02319 51 aa2.48□□□□□ -2.01
Csde1-206ENSMUST00000197488 2310046K23RikA0A0A6YVW6 87 aa2.47□□□□□ -2.01
Csde1-206ENSMUST00000197488 Gm9789Q8BIG3 52 aa2.45□□□□□ -2.02
Csde1-206ENSMUST00000197488 Fsip2A2ARZ3 6995 aa2.42□□□□□ -2.02
Csde1-206ENSMUST00000197488 Syne1Q6ZWR6 8799 aa2.41□□□□□ -2.02
Csde1-206ENSMUST00000197488 Lce1kJ3QP15 125 aa2.41□□□□□ -2.02
Csde1-206ENSMUST00000197488 SspoQ8CG65 4998 aa2.4□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 103.5 ms