RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Coa6Q8BGD8 79 aa5.08□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Crct1Q6PAI5 102 aa5.07□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Znf706Q9D115 76 aaKnown RBP5.07□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Igkv3-5A0A140T8M6 119 aa5.06□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Gm11596B1AQB0 205 aa5.06□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Igkv3-7A0A0G2JE31 119 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 NbdyA0A0N4SUI7 68 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 A0A286YE49 62 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Krtap4-8B1AQA8 209 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Atox1O08997 68 aaKnown RBP5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Spink8Q09TK9 105 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Spint4Q9D263 159 aa5.05□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Gm10642Q3TWM1 71 aa5.04□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Gm5965D3Z724 196 aa5.03□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Ccdc179J3QM76 67 aa5.03□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 SnurfQ9WU12 71 aa5.03□□□□□ -1.6
Pdlim5-209ENSMUST00000196908 Brk1Q91VR8 75 aa5.02□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Gm2310J3QNJ2 377 aa5.01□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Reg3aO09037 175 aa5.01□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Cdc42se1Q8BHL7 80 aa5.01□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Cypt14J3QPF7 87 aa5□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Defb12Q8K4N3 78 aa4.98□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Defb39Q70KL3 74 aa4.97□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 2310057N15RikQ9D6T8 200 aa4.97□□□□□ -1.61
Pdlim5-209ENSMUST00000196908 Dph3Q8K0W9 82 aa4.96□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Igkv3-3A0A140T8Q0 119 aa4.95□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Gm16253D3Z167 63 aa4.95□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Gm10337F7DEP7 55 aa4.95□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 1700074P13RikQ9D9G7 251 aa4.95□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Coa5Q99M07 74 aa4.94□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 H2al1bA0A087WP11 105 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 H2al1kJ3QP08 105 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 H2al1eQ810S6 105 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Lce1a2Q9D1K4 149 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Lce1iQ9D6P5 149 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 H2al1mQ9DAD9 105 aa4.92□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 Anapc11Q9CPX9 84 aa4.91□□□□□ -1.62
Pdlim5-209ENSMUST00000196908 HrnrQ8VHD8 2496 aa4.9□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Sox16Q62247 57 aa4.89□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Muc5bE9Q5I3 4800 aa4.89□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Gm10643Q3URG9 111 aa4.88□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Krtap4-6Q3V4B7 195 aa4.88□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Gm10160F6Y577 67 aa4.86□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Chtf8P0CG14 533 aa4.86□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 Phxr4P15974 95 aa4.85□□□□□ -1.63
Pdlim5-209ENSMUST00000196908 SspoQ8CG65 4998 aa4.82□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Gm10267M0QWD8 85 aa4.82□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Gm10272F7CZ33 110 aa4.81□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Krtap5-4Q62220 223 aa4.81□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Sec61bQ9CQS8 96 aaKnown RBP4.8□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Gm10318A0A1W2P728 225 aa4.79□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Cypt15B1AXS0 87 aa4.79□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Gm9821Q8K076 103 aa4.79□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 1700042G07RikB1AUF7 90 aa4.78□□□□□ -1.64
Pdlim5-209ENSMUST00000196908 Gm5767A0A0J9YTU8 78 aa4.77□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Spaca4Q80ZQ0 127 aa4.77□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Defb13Q8R2I4 64 aa4.76□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Ndufb1P0DN34 57 aa4.75□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Krtap4-13Q9D7P3 165 aa4.74□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Mdn1A2ANY6 5589 aaKnown RBP4.74□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Rps29P62274 56 aa4.73□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Gm45337A0A1B0GS71 263 aa4.72□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Limd2Q8BGB5 128 aa4.72□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 4933415A04RikQ9D443 101 aa4.72□□□□□ -1.65
Pdlim5-209ENSMUST00000196908 Gm20661K7N787 53 aa4.71□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Gm11564A2A4L9 201 aa4.7□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Krtap19-3Q925H6 87 aa4.7□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Uqcr11Q9CPX8 56 aa4.7□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 9230102O04RikA2ASX7 82 aa4.68□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Krtap1-4Q3V2D6 188 aa4.68□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Gm21798J3QNU5 87 aa4.67□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Defb38Q7TNV7 63 aa4.66□□□□□ -1.66
Pdlim5-209ENSMUST00000196908 Mt3P28184 68 aa4.65□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Krtap19-1Q925H2 87 aa4.65□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Krtap16-3Q8C1I6 86 aa4.64□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Krtap15-1Q9QZU5 150 aa4.64□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Gm26620Q9CY65 116 aa4.63□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 B930094E09RikQ8C4T2 136 aa4.62□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 SptssbQ925E8 76 aa4.61□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 2310034C09RikQ9D746 214 aa4.61□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Gm10999F6Q4M4 69 aa4.59□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 4930507D05RikQ8C9C9 103 aa4.59□□□□□ -1.67
Pdlim5-209ENSMUST00000196908 Q8BGJ3 129 aa4.58□□□□□ -1.68
Pdlim5-209ENSMUST00000196908 2310079G19RikQ9D6L6 185 aa4.58□□□□□ -1.68
Pdlim5-209ENSMUST00000196908 Gm3646F6S692 53 aa4.5□□□□□ -1.69
Pdlim5-209ENSMUST00000196908 Gm4491E0CX42 125 aa4.49□□□□□ -1.69
Pdlim5-209ENSMUST00000196908 Fsip2A2ARZ3 6995 aa4.48□□□□□ -1.69
Pdlim5-209ENSMUST00000196908 Krtap6-3A0A087WQL6 57 aa4.47□□□□□ -1.69
Pdlim5-209ENSMUST00000196908 Fam229aB2KGE5 128 aa4.47□□□□□ -1.69
Pdlim5-209ENSMUST00000196908 Mt4P47945 62 aa4.43□□□□□ -1.7
Pdlim5-209ENSMUST00000196908 Sec61gP60060 68 aa4.42□□□□□ -1.7
Pdlim5-209ENSMUST00000196908 Krtap9-3Q3V2C1 136 aa4.42□□□□□ -1.7
Pdlim5-209ENSMUST00000196908 Defb1P56386 69 aa4.41□□□□□ -1.7
Pdlim5-209ENSMUST00000196908 Cox6b2Q80ZN9 88 aa4.39□□□□□ -1.71
Pdlim5-209ENSMUST00000196908 Prm2P07978 107 aa4.38□□□□□ -1.71
Pdlim5-209ENSMUST00000196908 Ndufs5Q99LY9 106 aa4.37□□□□□ -1.71
Pdlim5-209ENSMUST00000196908 Rpl37Q9D823 97 aa4.37□□□□□ -1.71
Pdlim5-209ENSMUST00000196908 Pla2g10Q9QXX3 151 aa4.37□□□□□ -1.71
Pdlim5-209ENSMUST00000196908 Rnase13Q5GAM7 153 aa4.31□□□□□ -1.72
Pdlim5-209ENSMUST00000196908 Gm17416Q30KP4 66 aa4.3□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 95.7 ms