RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Gm11563B1AQ90 168 aa7.69□□□□□ -1.18
Msh3-205ENSMUST00000187424 Gm11595B1AQA7 289 aa7.69□□□□□ -1.18
Msh3-205ENSMUST00000187424 Krtap4-8B1AQA8 209 aa7.69□□□□□ -1.18
Msh3-205ENSMUST00000187424 Atox1O08997 68 aaKnown RBP7.67□□□□□ -1.18
Msh3-205ENSMUST00000187424 Gm10160F6Y577 67 aa7.62□□□□□ -1.19
Msh3-205ENSMUST00000187424 Spint4Q9D263 159 aa7.62□□□□□ -1.19
Msh3-205ENSMUST00000187424 Coa6Q8BGD8 79 aa7.59□□□□□ -1.19
Msh3-205ENSMUST00000187424 Krtap3-1A2A591 98 aa7.58□□□□□ -1.2
Msh3-205ENSMUST00000187424 Serp2Q6TAW2 65 aa7.57□□□□□ -1.2
Msh3-205ENSMUST00000187424 Krtap19-2Q925I0 141 aa7.55□□□□□ -1.2
Msh3-205ENSMUST00000187424 Krtap9-5A2A5X3 358 aa7.52□□□□□ -1.21
Msh3-205ENSMUST00000187424 Defb1P56386 69 aa7.52□□□□□ -1.21
Msh3-205ENSMUST00000187424 B230307C23RikQ8BLB2 64 aa7.52□□□□□ -1.21
Msh3-205ENSMUST00000187424 Anapc13Q8R034 74 aa7.46□□□□□ -1.22
Msh3-205ENSMUST00000187424 Gm10643Q3URG9 111 aa7.44□□□□□ -1.22
Msh3-205ENSMUST00000187424 Krtap4-9B1AQA9 244 aa7.43□□□□□ -1.22
Msh3-205ENSMUST00000187424 Cox6b2Q80ZN9 88 aa7.43□□□□□ -1.22
Msh3-205ENSMUST00000187424 Gm19426M0QWC7 77 aa7.4□□□□□ -1.22
Msh3-205ENSMUST00000187424 Coa5Q99M07 74 aa7.37□□□□□ -1.23
Msh3-205ENSMUST00000187424 Krtap12-1Q9Z287 130 aa7.36□□□□□ -1.23
Msh3-205ENSMUST00000187424 Fsip2A2ARZ3 6995 aa7.36□□□□□ -1.23
Msh3-205ENSMUST00000187424 Gm17606F6ZL36 78 aa7.29□□□□□ -1.24
Msh3-205ENSMUST00000187424 Gm6358A0A087WPH4 74 aa7.28□□□□□ -1.24
Msh3-205ENSMUST00000187424 Gm10382Q3V0T5 144 aa7.26□□□□□ -1.25
Msh3-205ENSMUST00000187424 SptssbQ925E8 76 aa7.25□□□□□ -1.25
Msh3-205ENSMUST00000187424 Gm20537G3UYK7 97 aa7.24□□□□□ -1.25
Msh3-205ENSMUST00000187424 BC029722A0A0N4SW31 51 aa7.23□□□□□ -1.25
Msh3-205ENSMUST00000187424 Krtap6-3A0A087WQL6 57 aa7.22□□□□□ -1.25
Msh3-205ENSMUST00000187424 Mt4P47945 62 aa7.22□□□□□ -1.25
Msh3-205ENSMUST00000187424 Prm2P07978 107 aa7.18□□□□□ -1.26
Msh3-205ENSMUST00000187424 Krtap19-9aF8WH65 55 aa7.17□□□□□ -1.26
Msh3-205ENSMUST00000187424 Krtap4-13Q9D7P3 165 aa7.16□□□□□ -1.26
Msh3-205ENSMUST00000187424 Pla2g10Q9QXX3 151 aa7.13□□□□□ -1.27
Msh3-205ENSMUST00000187424 Gm20661K7N787 53 aa7.09□□□□□ -1.27
Msh3-205ENSMUST00000187424 SnurfQ9WU12 71 aa7.08□□□□□ -1.28
Msh3-205ENSMUST00000187424 CriptO70333 101 aa7.07□□□□□ -1.28
Msh3-205ENSMUST00000187424 Smim20D3Z7Q2 69 aa7.05□□□□□ -1.28
Msh3-205ENSMUST00000187424 Smlr1J3QMJ4 66 aa7.04□□□□□ -1.28
Msh3-205ENSMUST00000187424 Prr13Q9CQJ5 137 aa7.03□□□□□ -1.28
Msh3-205ENSMUST00000187424 Spink7Q6IE32 76 aa7.02□□□□□ -1.29
Msh3-205ENSMUST00000187424 Pet100P0DJE0 76 aa6.98□□□□□ -1.29
Msh3-205ENSMUST00000187424 Krtap9-3Q3V2C1 136 aa6.98□□□□□ -1.29
Msh3-205ENSMUST00000187424 Limd2Q8BGB5 128 aa6.98□□□□□ -1.29
Msh3-205ENSMUST00000187424 Cdc42se1Q8BHL7 80 aa6.97□□□□□ -1.29
Msh3-205ENSMUST00000187424 Lce1iQ9D6P5 149 aa6.97□□□□□ -1.29
Msh3-205ENSMUST00000187424 Lce1bQ9D149 137 aa6.96□□□□□ -1.3
Msh3-205ENSMUST00000187424 Tmem258P61166 79 aa6.93□□□□□ -1.3
Msh3-205ENSMUST00000187424 H2al1aQ5M8Q2 105 aa6.92□□□□□ -1.3
Msh3-205ENSMUST00000187424 H2al1eQ810S6 105 aa6.92□□□□□ -1.3
Msh3-205ENSMUST00000187424 Gm10197F6QEY5 67 aa6.88□□□□□ -1.31
Msh3-205ENSMUST00000187424 Lce1lQ9D1G7 135 aa6.87□□□□□ -1.31
Msh3-205ENSMUST00000187424 Lce1a2Q9D1K4 149 aa6.86□□□□□ -1.31
Msh3-205ENSMUST00000187424 Gm19935A0A1B0GSF9 52 aa6.84□□□□□ -1.31
Msh3-205ENSMUST00000187424 Phxr4P15974 95 aa6.83□□□□□ -1.32
Msh3-205ENSMUST00000187424 Uqcr11Q9CPX8 56 aa6.82□□□□□ -1.32
Msh3-205ENSMUST00000187424 Sprr2kO70562 68 aa6.79□□□□□ -1.32
Msh3-205ENSMUST00000187424 2300003K06RikA2A4M0 262 aa6.78□□□□□ -1.32
Msh3-205ENSMUST00000187424 Sprr2a3Q4KL71 83 aa6.78□□□□□ -1.32
Msh3-205ENSMUST00000187424 Sprr2a1Q9CQK8 83 aa6.78□□□□□ -1.32
Msh3-205ENSMUST00000187424 Serp1Q9Z1W5 66 aa6.77□□□□□ -1.33
Msh3-205ENSMUST00000187424 Sec61gP60060 68 aa6.76□□□□□ -1.33
Msh3-205ENSMUST00000187424 H2al1bA0A087WP11 105 aa6.75□□□□□ -1.33
Msh3-205ENSMUST00000187424 Mt2P02798 61 aa6.75□□□□□ -1.33
Msh3-205ENSMUST00000187424 Gm9955Q8CEJ8 102 aa6.73□□□□□ -1.33
Msh3-205ENSMUST00000187424 Krtap4-7Q9D732 168 aa6.73□□□□□ -1.33
Msh3-205ENSMUST00000187424 Brk1Q91VR8 75 aa6.7□□□□□ -1.34
Msh3-205ENSMUST00000187424 SmcpP15265 143 aa6.69□□□□□ -1.34
Msh3-205ENSMUST00000187424 Gm17402F6Z0L5 76 aa6.68□□□□□ -1.34
Msh3-205ENSMUST00000187424 Gm38119A0A0A6YX29 146 aa6.66□□□□□ -1.34
Msh3-205ENSMUST00000187424 Lce1hQ9D6R3 140 aa6.64□□□□□ -1.35
Msh3-205ENSMUST00000187424 Krtap8-1O08633 61 aa6.63□□□□□ -1.35
Msh3-205ENSMUST00000187424 Krtap20-2E9Q0A8 60 aa6.62□□□□□ -1.35
Msh3-205ENSMUST00000187424 Ndufb1P0DN34 57 aa6.6□□□□□ -1.35
Msh3-205ENSMUST00000187424 Lce1eQ9D139 143 aa6.59□□□□□ -1.35
Msh3-205ENSMUST00000187424 Lce1a1Q9CQH5 143 aa6.58□□□□□ -1.36
Msh3-205ENSMUST00000187424 Gm19668J3QMD1 248 aa6.48□□□□□ -1.37
Msh3-205ENSMUST00000187424 Rps28P62858 69 aaKnown RBP6.46□□□□□ -1.38
Msh3-205ENSMUST00000187424 Krtap22-2J3QNX6 67 aa6.41□□□□□ -1.38
Msh3-205ENSMUST00000187424 Sprr2gO70558 76 aa6.37□□□□□ -1.39
Msh3-205ENSMUST00000187424 Eppk1Q8R0W0 6548 aa6.33□□□□□ -1.4
Msh3-205ENSMUST00000187424 A0A1Y7VJH8 109 aa6.31□□□□□ -1.4
Msh3-205ENSMUST00000187424 Gm21887J3QQ04 176 aa6.26□□□□□ -1.41
Msh3-205ENSMUST00000187424 Krtap19-9bQ99NG9 58 aa6.22□□□□□ -1.41
Msh3-205ENSMUST00000187424 2310046K23RikA0A0A6YVW6 87 aa6.21□□□□□ -1.42
Msh3-205ENSMUST00000187424 Gm3880A0A1B0GSB3 72 aa6.19□□□□□ -1.42
Msh3-205ENSMUST00000187424 H2al1kJ3QP08 105 aa6.17□□□□□ -1.42
Msh3-205ENSMUST00000187424 Camk2n1Q6QWF9 78 aa6.17□□□□□ -1.42
Msh3-205ENSMUST00000187424 A030005L19RikA0A1Y7VIU2 113 aa6.11□□□□□ -1.43
Msh3-205ENSMUST00000187424 Krtap5-2Q9D5Z7 189 aa6.08□□□□□ -1.44
Msh3-205ENSMUST00000187424 H2al1mQ9DAD9 105 aa6.07□□□□□ -1.44
Msh3-205ENSMUST00000187424 4933415A04RikQ9D443 101 aa6.05□□□□□ -1.44
Msh3-205ENSMUST00000187424 Gm11559Q9D3H7 191 aa6.03□□□□□ -1.44
Msh3-205ENSMUST00000187424 Lce1dQ9D731 133 aa5.99□□□□□ -1.45
Msh3-205ENSMUST00000187424 Gm11639A0A1D5RLM8 5808 aa5.95□□□□□ -1.46
Msh3-205ENSMUST00000187424 Ndufs5Q99LY9 106 aa5.94□□□□□ -1.46
Msh3-205ENSMUST00000187424 Sox16Q62247 57 aa5.91□□□□□ -1.46
Msh3-205ENSMUST00000187424 Gm11554B1AQB2 190 aa5.88□□□□□ -1.47
Msh3-205ENSMUST00000187424 Gm4553A0A1B0GSA9 284 aa5.86□□□□□ -1.47
Msh3-205ENSMUST00000187424 Gm12216A0A1W2P827 62 aa5.84□□□□□ -1.47
Msh3-205ENSMUST00000187424 Macf1Q9QXZ0 7354 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms