RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Gm19402J3QJV4 266 aa6.85□□□□□ -1.31
Cux1-206ENSMUST00000176172 Csmd3Q80T79 3707 aa6.84□□□□□ -1.31
Cux1-206ENSMUST00000176172 Ryr1E9PZQ0 5035 aa6.81□□□□□ -1.32
Cux1-206ENSMUST00000176172 Dnah17Q69Z23 4481 aa6.81□□□□□ -1.32
Cux1-206ENSMUST00000176172 Sprr2kO70562 68 aa6.74□□□□□ -1.33
Cux1-206ENSMUST00000176172 Dnah7bL7N1Y0 4068 aa6.66□□□□□ -1.34
Cux1-206ENSMUST00000176172 SacsQ9JLC8 4582 aa6.65□□□□□ -1.35
Cux1-206ENSMUST00000176172 Mycbp2Q7TPH6 4711 aa6.62□□□□□ -1.35
Cux1-206ENSMUST00000176172 Dnah11E9Q7N9 4488 aa6.59□□□□□ -1.35
Cux1-206ENSMUST00000176172 Dync1h1Q9JHU4 4644 aaKnown RBP6.55□□□□□ -1.36
Cux1-206ENSMUST00000176172 Dnah9B1AR51 4484 aa6.51□□□□□ -1.37
Cux1-206ENSMUST00000176172 Dync2h1Q45VK7 4306 aa6.51□□□□□ -1.37
Cux1-206ENSMUST00000176172 Lce1mQ9CR91 182 aa6.5□□□□□ -1.37
Cux1-206ENSMUST00000176172 Krtap16-3Q8C1I6 86 aa6.45□□□□□ -1.38
Cux1-206ENSMUST00000176172 Krtap19-3Q925H6 87 aa6.45□□□□□ -1.38
Cux1-206ENSMUST00000176172 ApobE9Q414 4505 aa6.45□□□□□ -1.38
Cux1-206ENSMUST00000176172 Fat1A0A1L1SQU7 4645 aa6.43□□□□□ -1.38
Cux1-206ENSMUST00000176172 PrkdcP97313 4128 aa6.41□□□□□ -1.38
Cux1-206ENSMUST00000176172 Dnah2P0C6F1 4456 aa6.4□□□□□ -1.39
Cux1-206ENSMUST00000176172 Sprr2gO70558 76 aa6.39□□□□□ -1.39
Cux1-206ENSMUST00000176172 Krtap9-5A2A5X3 358 aa6.38□□□□□ -1.39
Cux1-206ENSMUST00000176172 Lrp1bQ9JI18 4599 aa6.38□□□□□ -1.39
Cux1-206ENSMUST00000176172 TnxbO35452 4006 aa6.38□□□□□ -1.39
Cux1-206ENSMUST00000176172 Dnah3Q8BW94 4083 aa6.37□□□□□ -1.39
Cux1-206ENSMUST00000176172 Krtap19-1Q925H2 87 aa6.34□□□□□ -1.39
Cux1-206ENSMUST00000176172 Dnah8Q91XQ0 4731 aa6.32□□□□□ -1.4
Cux1-206ENSMUST00000176172 Dnah6E9Q0B6 4144 aa6.29□□□□□ -1.4
Cux1-206ENSMUST00000176172 Kmt2aP55200 3966 aa6.29□□□□□ -1.4
Cux1-206ENSMUST00000176172 Prm1P02319 51 aa6.28□□□□□ -1.4
Cux1-206ENSMUST00000176172 HydinQ80W93 5154 aa6.25□□□□□ -1.41
Cux1-206ENSMUST00000176172 Lce3bQ9CQM7 98 aa6.23□□□□□ -1.41
Cux1-206ENSMUST00000176172 Dnah1E9Q8T7 4250 aa6.21□□□□□ -1.41
Cux1-206ENSMUST00000176172 Kiaa1109A2AAE1 5005 aa6.21□□□□□ -1.42
Cux1-206ENSMUST00000176172 Lce3cQ91V05 98 aa6.16□□□□□ -1.42
Cux1-206ENSMUST00000176172 2310046K23RikA0A0A6YVW6 87 aa6.16□□□□□ -1.42
Cux1-206ENSMUST00000176172 Gm10100J3QK64 120 aa6.16□□□□□ -1.42
Cux1-206ENSMUST00000176172 Herc2Q4U2R1 4836 aa6.15□□□□□ -1.43
Cux1-206ENSMUST00000176172 Dnhd1D3Z2X2 4750 aa6.14□□□□□ -1.43
Cux1-206ENSMUST00000176172 Krtap22-2J3QNX6 67 aa6.13□□□□□ -1.43
Cux1-206ENSMUST00000176172 Pkd1O08852 4293 aa6.13□□□□□ -1.43
Cux1-206ENSMUST00000176172 Ryr3A2AGL3 4863 aa6.12□□□□□ -1.43
Cux1-206ENSMUST00000176172 Fat3Q8BNA6 4555 aa6.11□□□□□ -1.43
Cux1-206ENSMUST00000176172 Gm10272F7CZ33 110 aa6.11□□□□□ -1.43
Cux1-206ENSMUST00000176172 Mt2P02798 61 aa6.11□□□□□ -1.43
Cux1-206ENSMUST00000176172 Hectd4E9Q2E4 4418 aa6.09□□□□□ -1.44
Cux1-206ENSMUST00000176172 Lrp2A2ARV4 4660 aa6.07□□□□□ -1.44
Cux1-206ENSMUST00000176172 Lrp1Q91ZX7 4545 aaKnown RBP6.06□□□□□ -1.44
Cux1-206ENSMUST00000176172 Ryr2E9Q401 4966 aaKnown RBP6.05□□□□□ -1.44
Cux1-206ENSMUST00000176172 Gm7735D3YX18 52 aa6.02□□□□□ -1.45
Cux1-206ENSMUST00000176172 Krtap19-2Q925I0 141 aa6.01□□□□□ -1.45
Cux1-206ENSMUST00000176172 Dnah7cA0A087WR13 4024 aa6□□□□□ -1.45
Cux1-206ENSMUST00000176172 Lce3eF8VQJ0 98 aa5.97□□□□□ -1.45
Cux1-206ENSMUST00000176172 Gm10142J3KMP7 120 aa5.97□□□□□ -1.45
Cux1-206ENSMUST00000176172 Lce3fQ6PAI4 98 aa5.97□□□□□ -1.45
Cux1-206ENSMUST00000176172 Fras1Q80T14 4010 aa5.94□□□□□ -1.46
Cux1-206ENSMUST00000176172 PcloQ9QYX7 5068 aa5.92□□□□□ -1.46
Cux1-206ENSMUST00000176172 Krtap1-3A2A588 173 aa5.91□□□□□ -1.46
Cux1-206ENSMUST00000176172 Dnah7aE9Q0T8 4024 aa5.89□□□□□ -1.47
Cux1-206ENSMUST00000176172 Lce3dE9Q8V1 98 aa5.89□□□□□ -1.47
Cux1-206ENSMUST00000176172 Vps13bQ80TY5 3993 aa5.86□□□□□ -1.47
Cux1-206ENSMUST00000176172 Lce1jD3YUU5 139 aa5.84□□□□□ -1.47
Cux1-206ENSMUST00000176172 Gm9789Q8BIG3 52 aa5.84□□□□□ -1.47
Cux1-206ENSMUST00000176172 Gm38119A0A0A6YX29 146 aa5.8□□□□□ -1.48
Cux1-206ENSMUST00000176172 Lce3aQ497I5 98 aa5.8□□□□□ -1.48
Cux1-206ENSMUST00000176172 Sprr2iO70560 76 aa5.76□□□□□ -1.49
Cux1-206ENSMUST00000176172 Kmt2cQ8BRH4 4903 aa5.75□□□□□ -1.49
Cux1-206ENSMUST00000176172 Fat2Q5F226 4351 aa5.75□□□□□ -1.49
Cux1-206ENSMUST00000176172 Mdn1A2ANY6 5589 aaKnown RBP5.72□□□□□ -1.49
Cux1-206ENSMUST00000176172 Gm10061D3Z714 54 aa5.7□□□□□ -1.5
Cux1-206ENSMUST00000176172 Herc1E9PZP8 4859 aa5.66□□□□□ -1.5
Cux1-206ENSMUST00000176172 Syne1Q6ZWR6 8799 aa5.64□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1fB9EJP6 147 aa5.61□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1cQ9D1C5 147 aa5.61□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1lQ9D1G7 135 aa5.61□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1dQ9D731 133 aa5.61□□□□□ -1.51
Cux1-206ENSMUST00000176172 Birc6O88738 4882 aa5.6□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1gQ9D195 139 aa5.59□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1iQ9D6P5 149 aa5.59□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1hQ9D6R3 140 aa5.59□□□□□ -1.51
Cux1-206ENSMUST00000176172 Lce1bQ9D149 137 aa5.57□□□□□ -1.52
Cux1-206ENSMUST00000176172 Krtap9-3Q3V2C1 136 aa5.53□□□□□ -1.52
Cux1-206ENSMUST00000176172 Gm11569B1AQB1 180 aa5.53□□□□□ -1.52
Cux1-206ENSMUST00000176172 Krtap19-4Q925H7 84 aa5.5□□□□□ -1.53
Cux1-206ENSMUST00000176172 Lce1eQ9D139 143 aa5.49□□□□□ -1.53
Cux1-206ENSMUST00000176172 Gm10024A0A0A0MQA4 119 aa5.48□□□□□ -1.53
Cux1-206ENSMUST00000176172 Sprr2eO70556 76 aa5.45□□□□□ -1.54
Cux1-206ENSMUST00000176172 Pkhd1E9PZ36 4059 aa5.44□□□□□ -1.54
Cux1-206ENSMUST00000176172 Abca13Q5SSE9 5034 aa5.4□□□□□ -1.55
Cux1-206ENSMUST00000176172 Ubr4A2AN08 5180 aa5.36□□□□□ -1.55
Cux1-206ENSMUST00000176172 Pkhd1l1Q80ZA4 4249 aa5.36□□□□□ -1.55
Cux1-206ENSMUST00000176172 Sprr2fO70557 76 aa5.32□□□□□ -1.56
Cux1-206ENSMUST00000176172 4932415D10RikA0A1W2P6U8 4986 aa5.31□□□□□ -1.56
Cux1-206ENSMUST00000176172 Mt4P47945 62 aa5.27□□□□□ -1.57
Cux1-206ENSMUST00000176172 Lce1a2Q9D1K4 149 aa5.25□□□□□ -1.57
Cux1-206ENSMUST00000176172 Krtap4-2B1AQ85 167 aa5.22□□□□□ -1.57
Cux1-206ENSMUST00000176172 Krtap4-6Q3V4B7 195 aa5.21□□□□□ -1.58
Cux1-206ENSMUST00000176172 Fat4Q2PZL6 4981 aa5.19□□□□□ -1.58
Cux1-206ENSMUST00000176172 Rnf213E9Q555 5152 aaKnown RBP5.18□□□□□ -1.58
Cux1-206ENSMUST00000176172 ZanO88799 5376 aa5.1□□□□□ -1.59
Cux1-206ENSMUST00000176172 Sprr2dO70555 85 aa5.03□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms