RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Pet100P0DJE0 76 aa9.5□□□□□ -0.89
Lig3-209ENSMUST00000173009 SspoQ8CG65 4998 aa9.46□□□□□ -0.89
Lig3-209ENSMUST00000173009 Gm17606F6ZL36 78 aa9.46□□□□□ -0.9
Lig3-209ENSMUST00000173009 Tmem258P61166 79 aa9.46□□□□□ -0.9
Lig3-209ENSMUST00000173009 Gm20661K7N787 53 aa9.43□□□□□ -0.9
Lig3-209ENSMUST00000173009 Smim20D3Z7Q2 69 aa9.42□□□□□ -0.9
Lig3-209ENSMUST00000173009 Gm19935A0A1B0GSF9 52 aa9.37□□□□□ -0.91
Lig3-209ENSMUST00000173009 Cdc42se1Q8BHL7 80 aa9.37□□□□□ -0.91
Lig3-209ENSMUST00000173009 Gm19426M0QWC7 77 aa9.34□□□□□ -0.91
Lig3-209ENSMUST00000173009 Gm10382Q3V0T5 144 aa9.32□□□□□ -0.92
Lig3-209ENSMUST00000173009 Gm11569B1AQB1 180 aa9.3□□□□□ -0.92
Lig3-209ENSMUST00000173009 Gm10197F6QEY5 67 aa9.29□□□□□ -0.92
Lig3-209ENSMUST00000173009 H2al1aQ5M8Q2 105 aa9.27□□□□□ -0.92
Lig3-209ENSMUST00000173009 H2al1eQ810S6 105 aa9.27□□□□□ -0.92
Lig3-209ENSMUST00000173009 BC029722A0A0N4SW31 51 aa9.27□□□□□ -0.93
Lig3-209ENSMUST00000173009 Gm20537G3UYK7 97 aa9.19□□□□□ -0.94
Lig3-209ENSMUST00000173009 Brk1Q91VR8 75 aa9.19□□□□□ -0.94
Lig3-209ENSMUST00000173009 Serp1Q9Z1W5 66 aa9.19□□□□□ -0.94
Lig3-209ENSMUST00000173009 SmcpP15265 143 aa9.17□□□□□ -0.94
Lig3-209ENSMUST00000173009 Phxr4P15974 95 aa9.17□□□□□ -0.94
Lig3-209ENSMUST00000173009 Lce1jD3YUU5 139 aa9.16□□□□□ -0.94
Lig3-209ENSMUST00000173009 Krtap12-1Q9Z287 130 aa9.12□□□□□ -0.95
Lig3-209ENSMUST00000173009 Uqcr11Q9CPX8 56 aa9.09□□□□□ -0.95
Lig3-209ENSMUST00000173009 H2al1bA0A087WP11 105 aa9.08□□□□□ -0.96
Lig3-209ENSMUST00000173009 Krtap17-1A2A5X6 109 aa9.08□□□□□ -0.96
Lig3-209ENSMUST00000173009 Krtap9-5A2A5X3 358 aa9.07□□□□□ -0.96
Lig3-209ENSMUST00000173009 Krtap19-2Q925I0 141 aa9.07□□□□□ -0.96
Lig3-209ENSMUST00000173009 Limd2Q8BGB5 128 aa9.05□□□□□ -0.96
Lig3-209ENSMUST00000173009 Sec61gP60060 68 aa9.01□□□□□ -0.97
Lig3-209ENSMUST00000173009 Spink7Q6IE32 76 aa8.97□□□□□ -0.97
Lig3-209ENSMUST00000173009 B930094E09RikQ8C4T2 136 aa8.97□□□□□ -0.97
Lig3-209ENSMUST00000173009 Rps28P62858 69 aaKnown RBP8.96□□□□□ -0.97
Lig3-209ENSMUST00000173009 CriptO70333 101 aa8.95□□□□□ -0.98
Lig3-209ENSMUST00000173009 Krtap19-9aF8WH65 55 aa8.94□□□□□ -0.98
Lig3-209ENSMUST00000173009 Ndufb1P0DN34 57 aa8.91□□□□□ -0.98
Lig3-209ENSMUST00000173009 Pla2g10Q9QXX3 151 aa8.91□□□□□ -0.98
Lig3-209ENSMUST00000173009 Krtap4-2B1AQ85 167 aa8.89□□□□□ -0.99
Lig3-209ENSMUST00000173009 Prm2P07978 107 aa8.89□□□□□ -0.99
Lig3-209ENSMUST00000173009 Gm11562A0PK51 136 aa8.84□□□□□ -1
Lig3-209ENSMUST00000173009 Gm9955Q8CEJ8 102 aa8.83□□□□□ -1
Lig3-209ENSMUST00000173009 Lce1gQ9D195 139 aa8.81□□□□□ -1
Lig3-209ENSMUST00000173009 Muc5bE9Q5I3 4800 aa8.79□□□□□ -1
Lig3-209ENSMUST00000173009 Gm11555B1AQ89 175 aa8.64□□□□□ -1.03
Lig3-209ENSMUST00000173009 Gm6358A0A087WPH4 74 aa8.63□□□□□ -1.03
Lig3-209ENSMUST00000173009 Sprr2a3Q4KL71 83 aa8.63□□□□□ -1.03
Lig3-209ENSMUST00000173009 Sprr2a1Q9CQK8 83 aa8.63□□□□□ -1.03
Lig3-209ENSMUST00000173009 Gm17402F6Z0L5 76 aa8.61□□□□□ -1.03
Lig3-209ENSMUST00000173009 Lce1iQ9D6P5 149 aa8.59□□□□□ -1.03
Lig3-209ENSMUST00000173009 Syne2Q6ZWQ0 6874 aaKnown RBP8.54□□□□□ -1.04
Lig3-209ENSMUST00000173009 Krtap4-6Q3V4B7 195 aa8.53□□□□□ -1.04
Lig3-209ENSMUST00000173009 Gm11596B1AQB0 205 aa8.51□□□□□ -1.05
Lig3-209ENSMUST00000173009 Mdn1A2ANY6 5589 aaKnown RBP8.48□□□□□ -1.05
Lig3-209ENSMUST00000173009 Lce1a2Q9D1K4 149 aa8.46□□□□□ -1.05
Lig3-209ENSMUST00000173009 Krtap4-1Q3UUY3 169 aa8.37□□□□□ -1.07
Lig3-209ENSMUST00000173009 Pcp4P63054 62 aa8.36□□□□□ -1.07
Lig3-209ENSMUST00000173009 H2al1kJ3QP08 105 aa8.35□□□□□ -1.07
Lig3-209ENSMUST00000173009 4933415A04RikQ9D443 101 aa8.3□□□□□ -1.08
Lig3-209ENSMUST00000173009 Mt2P02798 61 aa8.3□□□□□ -1.08
Lig3-209ENSMUST00000173009 Gm19668J3QMD1 248 aa8.28□□□□□ -1.08
Lig3-209ENSMUST00000173009 Gm3880A0A1B0GSB3 72 aa8.26□□□□□ -1.09
Lig3-209ENSMUST00000173009 Sox16Q62247 57 aa8.26□□□□□ -1.09
Lig3-209ENSMUST00000173009 H2al1mQ9DAD9 105 aa8.2□□□□□ -1.1
Lig3-209ENSMUST00000173009 Gm11564A2A4L9 201 aa8.17□□□□□ -1.1
Lig3-209ENSMUST00000173009 Gm11563B1AQ90 168 aa8.17□□□□□ -1.1
Lig3-209ENSMUST00000173009 Gm11595B1AQA7 289 aa8.17□□□□□ -1.1
Lig3-209ENSMUST00000173009 Krtap4-8B1AQA8 209 aa8.17□□□□□ -1.1
Lig3-209ENSMUST00000173009 Ndufs5Q99LY9 106 aa8.16□□□□□ -1.1
Lig3-209ENSMUST00000173009 Gm21887J3QQ04 176 aa8.09□□□□□ -1.11
Lig3-209ENSMUST00000173009 Krtap8-1O08633 61 aa8.06□□□□□ -1.12
Lig3-209ENSMUST00000173009 Camk2n1Q6QWF9 78 aa8.02□□□□□ -1.13
Lig3-209ENSMUST00000173009 Gm3646F6S692 53 aa7.98□□□□□ -1.13
Lig3-209ENSMUST00000173009 Krtap4-9B1AQA9 244 aa7.93□□□□□ -1.14
Lig3-209ENSMUST00000173009 Gm10337F7DEP7 55 aa7.89□□□□□ -1.15
Lig3-209ENSMUST00000173009 Gm12216A0A1W2P827 62 aa7.88□□□□□ -1.15
Lig3-209ENSMUST00000173009 Krtap22-2J3QNX6 67 aa7.87□□□□□ -1.15
Lig3-209ENSMUST00000173009 Mt4P47945 62 aa7.87□□□□□ -1.15
Lig3-209ENSMUST00000173009 Krtap9-3Q3V2C1 136 aa7.86□□□□□ -1.15
Lig3-209ENSMUST00000173009 Krtap19-9bQ99NG9 58 aa7.86□□□□□ -1.15
Lig3-209ENSMUST00000173009 Romo1P60603 79 aa7.75□□□□□ -1.17
Lig3-209ENSMUST00000173009 Fsip2A2ARZ3 6995 aa7.72□□□□□ -1.17
Lig3-209ENSMUST00000173009 Lce1bQ9D149 137 aa7.64□□□□□ -1.19
Lig3-209ENSMUST00000173009 Krtap4-13Q9D7P3 165 aa7.64□□□□□ -1.19
Lig3-209ENSMUST00000173009 Gm38119A0A0A6YX29 146 aa7.54□□□□□ -1.2
Lig3-209ENSMUST00000173009 Sprr2kO70562 68 aa7.5□□□□□ -1.21
Lig3-209ENSMUST00000173009 2300003K06RikA2A4M0 262 aa7.44□□□□□ -1.22
Lig3-209ENSMUST00000173009 Krtap6-3A0A087WQL6 57 aa7.41□□□□□ -1.22
Lig3-209ENSMUST00000173009 Lce1hQ9D6R3 140 aa7.32□□□□□ -1.24
Lig3-209ENSMUST00000173009 Krtap4-7Q9D732 168 aa7.28□□□□□ -1.24
Lig3-209ENSMUST00000173009 Lce1lQ9D1G7 135 aa7.27□□□□□ -1.25
Lig3-209ENSMUST00000173009 Krtap7-1Q9D3I6 87 aa7.27□□□□□ -1.25
Lig3-209ENSMUST00000173009 Tnp1P10856 55 aa7.04□□□□□ -1.28
Lig3-209ENSMUST00000173009 Gm40193A0A1B0GT39 78 aa7.01□□□□□ -1.29
Lig3-209ENSMUST00000173009 Gm10272F7CZ33 110 aa6.97□□□□□ -1.29
Lig3-209ENSMUST00000173009 Lce1dQ9D731 133 aa6.97□□□□□ -1.29
Lig3-209ENSMUST00000173009 Sprr2gO70558 76 aa6.97□□□□□ -1.29
Lig3-209ENSMUST00000173009 Lce1a1Q9CQH5 143 aa6.85□□□□□ -1.31
Lig3-209ENSMUST00000173009 A0A1Y7VJH8 109 aa6.84□□□□□ -1.31
Lig3-209ENSMUST00000173009 Krtap20-2E9Q0A8 60 aa6.8□□□□□ -1.32
Lig3-209ENSMUST00000173009 Syne1Q6ZWR6 8799 aa6.79□□□□□ -1.32
Lig3-209ENSMUST00000173009 SvipQ3UZP4 77 aa6.79□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms