RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Defb1P56386 69 aa6.57□□□□□ -1.36
Ercc1-203ENSMUST00000160369 Cox6b2Q80ZN9 88 aa6.55□□□□□ -1.36
Ercc1-203ENSMUST00000160369 B930094E09RikQ8C4T2 136 aa6.49□□□□□ -1.37
Ercc1-203ENSMUST00000160369 Coa5Q99M07 74 aa6.49□□□□□ -1.37
Ercc1-203ENSMUST00000160369 Krtap4-2B1AQ85 167 aa6.48□□□□□ -1.37
Ercc1-203ENSMUST00000160369 SvipQ3UZP4 77 aa6.46□□□□□ -1.38
Ercc1-203ENSMUST00000160369 BC029722A0A0N4SW31 51 aa6.45□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Smlr1J3QMJ4 66 aa6.44□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Krtap4-1Q3UUY3 169 aa6.43□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Krtap17-1A2A5X6 109 aa6.42□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Lce1gQ9D195 139 aa6.42□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Gm20537G3UYK7 97 aa6.41□□□□□ -1.38
Ercc1-203ENSMUST00000160369 Smim20D3Z7Q2 69 aa6.39□□□□□ -1.39
Ercc1-203ENSMUST00000160369 Krtap12-1Q9Z287 130 aa6.38□□□□□ -1.39
Ercc1-203ENSMUST00000160369 Krtap19-2Q925I0 141 aa6.37□□□□□ -1.39
Ercc1-203ENSMUST00000160369 Krtap9-5A2A5X3 358 aa6.36□□□□□ -1.39
Ercc1-203ENSMUST00000160369 CriptO70333 101 aa6.34□□□□□ -1.39
Ercc1-203ENSMUST00000160369 Gm10382Q3V0T5 144 aa6.32□□□□□ -1.4
Ercc1-203ENSMUST00000160369 Lce1jD3YUU5 139 aa6.31□□□□□ -1.4
Ercc1-203ENSMUST00000160369 Pla2g10Q9QXX3 151 aa6.31□□□□□ -1.4
Ercc1-203ENSMUST00000160369 Pet100P0DJE0 76 aa6.28□□□□□ -1.4
Ercc1-203ENSMUST00000160369 Limd2Q8BGB5 128 aa6.28□□□□□ -1.4
Ercc1-203ENSMUST00000160369 Krtap19-9aF8WH65 55 aa6.27□□□□□ -1.41
Ercc1-203ENSMUST00000160369 Gm20661K7N787 53 aa6.27□□□□□ -1.41
Ercc1-203ENSMUST00000160369 Gm11555B1AQ89 175 aa6.26□□□□□ -1.41
Ercc1-203ENSMUST00000160369 Syne2Q6ZWQ0 6874 aaKnown RBP6.26□□□□□ -1.41
Ercc1-203ENSMUST00000160369 Spink7Q6IE32 76 aa6.25□□□□□ -1.41
Ercc1-203ENSMUST00000160369 Muc5bE9Q5I3 4800 aa6.22□□□□□ -1.41
Ercc1-203ENSMUST00000160369 SnurfQ9WU12 71 aa6.2□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Tmem258P61166 79 aa6.19□□□□□ -1.42
Ercc1-203ENSMUST00000160369 H2al1aQ5M8Q2 105 aa6.19□□□□□ -1.42
Ercc1-203ENSMUST00000160369 H2al1eQ810S6 105 aa6.19□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Prm2P07978 107 aa6.18□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Cdc42se1Q8BHL7 80 aa6.18□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Gm11596B1AQB0 205 aa6.16□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Sec61gP60060 68 aa6.16□□□□□ -1.42
Ercc1-203ENSMUST00000160369 Gm19935A0A1B0GSF9 52 aa6.13□□□□□ -1.43
Ercc1-203ENSMUST00000160369 Krtap4-6Q3V4B7 195 aa6.12□□□□□ -1.43
Ercc1-203ENSMUST00000160369 Uqcr11Q9CPX8 56 aa6.12□□□□□ -1.43
Ercc1-203ENSMUST00000160369 Serp1Q9Z1W5 66 aa6.12□□□□□ -1.43
Ercc1-203ENSMUST00000160369 Prr13Q9CQJ5 137 aa6.1□□□□□ -1.43
Ercc1-203ENSMUST00000160369 Mdn1A2ANY6 5589 aaKnown RBP6.07□□□□□ -1.44
Ercc1-203ENSMUST00000160369 Gm6358A0A087WPH4 74 aa6.07□□□□□ -1.44
Ercc1-203ENSMUST00000160369 Gm10197F6QEY5 67 aa6.07□□□□□ -1.44
Ercc1-203ENSMUST00000160369 Phxr4P15974 95 aa6.05□□□□□ -1.44
Ercc1-203ENSMUST00000160369 H2al1bA0A087WP11 105 aa6.04□□□□□ -1.44
Ercc1-203ENSMUST00000160369 Rps28P62858 69 aaKnown RBP6.03□□□□□ -1.44
Ercc1-203ENSMUST00000160369 Gm11563B1AQ90 168 aa6.02□□□□□ -1.45
Ercc1-203ENSMUST00000160369 Gm9955Q8CEJ8 102 aa6.02□□□□□ -1.45
Ercc1-203ENSMUST00000160369 Krtap4-7Q9D732 168 aa6.02□□□□□ -1.45
Ercc1-203ENSMUST00000160369 SmcpP15265 143 aa6.01□□□□□ -1.45
Ercc1-203ENSMUST00000160369 Ndufb1P0DN34 57 aa5.99□□□□□ -1.45
Ercc1-203ENSMUST00000160369 Gm17402F6Z0L5 76 aa5.97□□□□□ -1.45
Ercc1-203ENSMUST00000160369 Brk1Q91VR8 75 aa5.95□□□□□ -1.46
Ercc1-203ENSMUST00000160369 Lce1iQ9D6P5 149 aa5.93□□□□□ -1.46
Ercc1-203ENSMUST00000160369 Sprr2a3Q4KL71 83 aa5.92□□□□□ -1.46
Ercc1-203ENSMUST00000160369 Sprr2a1Q9CQK8 83 aa5.92□□□□□ -1.46
Ercc1-203ENSMUST00000160369 Gm11564A2A4L9 201 aa5.87□□□□□ -1.47
Ercc1-203ENSMUST00000160369 Gm11595B1AQA7 289 aa5.87□□□□□ -1.47
Ercc1-203ENSMUST00000160369 Krtap4-8B1AQA8 209 aa5.87□□□□□ -1.47
Ercc1-203ENSMUST00000160369 Mt2P02798 61 aa5.82□□□□□ -1.48
Ercc1-203ENSMUST00000160369 Lce1a2Q9D1K4 149 aa5.82□□□□□ -1.48
Ercc1-203ENSMUST00000160369 Gm10337F7DEP7 55 aa5.78□□□□□ -1.48
Ercc1-203ENSMUST00000160369 Krtap8-1O08633 61 aa5.75□□□□□ -1.49
Ercc1-203ENSMUST00000160369 Gm19668J3QMD1 248 aa5.72□□□□□ -1.49
Ercc1-203ENSMUST00000160369 H2al1kJ3QP08 105 aa5.71□□□□□ -1.5
Ercc1-203ENSMUST00000160369 H2al1mQ9DAD9 105 aa5.71□□□□□ -1.5
Ercc1-203ENSMUST00000160369 Krtap4-9B1AQA9 244 aa5.7□□□□□ -1.5
Ercc1-203ENSMUST00000160369 Krtap9-3Q3V2C1 136 aa5.68□□□□□ -1.5
Ercc1-203ENSMUST00000160369 Sox16Q62247 57 aa5.66□□□□□ -1.5
Ercc1-203ENSMUST00000160369 Mt4P47945 62 aa5.63□□□□□ -1.51
Ercc1-203ENSMUST00000160369 Gm21887J3QQ04 176 aa5.59□□□□□ -1.51
Ercc1-203ENSMUST00000160369 Fsip2A2ARZ3 6995 aa5.56□□□□□ -1.52
Ercc1-203ENSMUST00000160369 Krtap22-2J3QNX6 67 aa5.56□□□□□ -1.52
Ercc1-203ENSMUST00000160369 Camk2n1Q6QWF9 78 aa5.54□□□□□ -1.52
Ercc1-203ENSMUST00000160369 Lce1bQ9D149 137 aa5.49□□□□□ -1.53
Ercc1-203ENSMUST00000160369 Krtap4-13Q9D7P3 165 aa5.47□□□□□ -1.53
Ercc1-203ENSMUST00000160369 Krtap19-9bQ99NG9 58 aa5.46□□□□□ -1.54
Ercc1-203ENSMUST00000160369 Krtap6-3A0A087WQL6 57 aa5.45□□□□□ -1.54
Ercc1-203ENSMUST00000160369 Sprr2kO70562 68 aa5.45□□□□□ -1.54
Ercc1-203ENSMUST00000160369 Gm3880A0A1B0GSB3 72 aa5.44□□□□□ -1.54
Ercc1-203ENSMUST00000160369 Gm38119A0A0A6YX29 146 aa5.35□□□□□ -1.55
Ercc1-203ENSMUST00000160369 Ndufs5Q99LY9 106 aa5.34□□□□□ -1.55
Ercc1-203ENSMUST00000160369 2300003K06RikA2A4M0 262 aa5.32□□□□□ -1.56
Ercc1-203ENSMUST00000160369 4933415A04RikQ9D443 101 aa5.32□□□□□ -1.56
Ercc1-203ENSMUST00000160369 Gm12216A0A1W2P827 62 aa5.3□□□□□ -1.56
Ercc1-203ENSMUST00000160369 Lce1lQ9D1G7 135 aa5.25□□□□□ -1.57
Ercc1-203ENSMUST00000160369 Romo1P60603 79 aa5.15□□□□□ -1.59
Ercc1-203ENSMUST00000160369 Sprr2gO70558 76 aa5.13□□□□□ -1.59
Ercc1-203ENSMUST00000160369 A0A1Y7VJH8 109 aa5.11□□□□□ -1.59
Ercc1-203ENSMUST00000160369 Gm3646F6S692 53 aa5.11□□□□□ -1.59
Ercc1-203ENSMUST00000160369 Krtap20-2E9Q0A8 60 aa4.99□□□□□ -1.61
Ercc1-203ENSMUST00000160369 Lce1a1Q9CQH5 143 aa4.98□□□□□ -1.61
Ercc1-203ENSMUST00000160369 Krtap7-1Q9D3I6 87 aa4.96□□□□□ -1.62
Ercc1-203ENSMUST00000160369 A0A1Y7VLE6 161 aa4.94□□□□□ -1.62
Ercc1-203ENSMUST00000160369 Lce1hQ9D6R3 140 aa4.92□□□□□ -1.62
Ercc1-203ENSMUST00000160369 Lce1dQ9D731 133 aa4.92□□□□□ -1.62
Ercc1-203ENSMUST00000160369 Krtap28-13A0A087WQP5 138 aa4.91□□□□□ -1.62
Ercc1-203ENSMUST00000160369 Krtap28-10A0A1Y7VP58 119 aa4.91□□□□□ -1.62
Ercc1-203ENSMUST00000160369 2310046K23RikA0A0A6YVW6 87 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 796.1 ms