RNA–Protein interactions for RNA: ENSMUST00000131252.7

Sf1-208, Transcript of Splicing factor 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Sf1, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf1-208ENSMUST00000131252 Dync1h1Q9JHU4 4644 aaKnown RBP5.75□□□□□ -1.49
Sf1-208ENSMUST00000131252 Ryr2E9Q401 4966 aaKnown RBP5.73□□□□□ -1.49
Sf1-208ENSMUST00000131252 Krtap7-1Q9D3I6 87 aa5.7□□□□□ -1.5
Sf1-208ENSMUST00000131252 Dnah2P0C6F1 4456 aa5.68□□□□□ -1.5
Sf1-208ENSMUST00000131252 Dnah7cA0A087WR13 4024 aa5.68□□□□□ -1.5
Sf1-208ENSMUST00000131252 Pkd1O08852 4293 aa5.67□□□□□ -1.5
Sf1-208ENSMUST00000131252 ApobE9Q414 4505 aa5.67□□□□□ -1.5
Sf1-208ENSMUST00000131252 Fat1A0A1L1SQU7 4645 aa5.66□□□□□ -1.5
Sf1-208ENSMUST00000131252 Gm19668J3QMD1 248 aa5.62□□□□□ -1.51
Sf1-208ENSMUST00000131252 Lrp1bQ9JI18 4599 aa5.59□□□□□ -1.51
Sf1-208ENSMUST00000131252 Sprr2a3Q4KL71 83 aa5.58□□□□□ -1.52
Sf1-208ENSMUST00000131252 Sprr2a1Q9CQK8 83 aa5.58□□□□□ -1.52
Sf1-208ENSMUST00000131252 Herc2Q4U2R1 4836 aa5.57□□□□□ -1.52
Sf1-208ENSMUST00000131252 Krtap1-5A2A590 122 aa5.56□□□□□ -1.52
Sf1-208ENSMUST00000131252 Kiaa1109A2AAE1 5005 aa5.56□□□□□ -1.52
Sf1-208ENSMUST00000131252 SacsQ9JLC8 4582 aa5.53□□□□□ -1.52
Sf1-208ENSMUST00000131252 Lrp1Q91ZX7 4545 aaKnown RBP5.5□□□□□ -1.53
Sf1-208ENSMUST00000131252 Hectd4E9Q2E4 4418 aa5.49□□□□□ -1.53
Sf1-208ENSMUST00000131252 Dnah8Q91XQ0 4731 aa5.46□□□□□ -1.53
Sf1-208ENSMUST00000131252 Gm10318A0A1W2P728 225 aa5.44□□□□□ -1.54
Sf1-208ENSMUST00000131252 Mycbp2Q7TPH6 4711 aa5.43□□□□□ -1.54
Sf1-208ENSMUST00000131252 Fat3Q8BNA6 4555 aa5.41□□□□□ -1.54
Sf1-208ENSMUST00000131252 Gm19402J3QJV4 266 aa5.4□□□□□ -1.54
Sf1-208ENSMUST00000131252 Lce1mQ9CR91 182 aa5.39□□□□□ -1.55
Sf1-208ENSMUST00000131252 Gm18596A0A1W2P860 280 aa5.39□□□□□ -1.55
Sf1-208ENSMUST00000131252 Pkhd1E9PZ36 4059 aa5.38□□□□□ -1.55
Sf1-208ENSMUST00000131252 Abca13Q5SSE9 5034 aa5.38□□□□□ -1.55
Sf1-208ENSMUST00000131252 Kmt2cQ8BRH4 4903 aa5.36□□□□□ -1.55
Sf1-208ENSMUST00000131252 Pkhd1l1Q80ZA4 4249 aa5.36□□□□□ -1.55
Sf1-208ENSMUST00000131252 HydinQ80W93 5154 aa5.35□□□□□ -1.55
Sf1-208ENSMUST00000131252 Crct1Q6PAI5 102 aa5.34□□□□□ -1.55
Sf1-208ENSMUST00000131252 Lrp2A2ARV4 4660 aa5.33□□□□□ -1.56
Sf1-208ENSMUST00000131252 Birc6O88738 4882 aa5.33□□□□□ -1.56
Sf1-208ENSMUST00000131252 Fat2Q5F226 4351 aa5.31□□□□□ -1.56
Sf1-208ENSMUST00000131252 Dnhd1D3Z2X2 4750 aa5.27□□□□□ -1.57
Sf1-208ENSMUST00000131252 Krtap1-4Q3V2D6 188 aa5.26□□□□□ -1.57
Sf1-208ENSMUST00000131252 Vps13bQ80TY5 3993 aa5.23□□□□□ -1.57
Sf1-208ENSMUST00000131252 PcloQ9QYX7 5068 aa5.21□□□□□ -1.58
Sf1-208ENSMUST00000131252 4933428G20RikQ9D3X4 101 aa5.2□□□□□ -1.58
Sf1-208ENSMUST00000131252 Krtap19-9aF8WH65 55 aa5.15□□□□□ -1.59
Sf1-208ENSMUST00000131252 Herc1E9PZP8 4859 aa5.11□□□□□ -1.59
Sf1-208ENSMUST00000131252 Krtap19-9bQ99NG9 58 aa5.02□□□□□ -1.61
Sf1-208ENSMUST00000131252 Krtap12-1Q9Z287 130 aa5.01□□□□□ -1.61
Sf1-208ENSMUST00000131252 Krtap16-3Q8C1I6 86 aa5.01□□□□□ -1.61
Sf1-208ENSMUST00000131252 Prm1P02319 51 aa5□□□□□ -1.61
Sf1-208ENSMUST00000131252 Gm7735D3YX18 52 aa4.97□□□□□ -1.61
Sf1-208ENSMUST00000131252 LorP18165 486 aa4.96□□□□□ -1.62
Sf1-208ENSMUST00000131252 Krtap19-3Q925H6 87 aa4.93□□□□□ -1.62
Sf1-208ENSMUST00000131252 Krtap19-1Q925H2 87 aa4.92□□□□□ -1.62
Sf1-208ENSMUST00000131252 Gm9789Q8BIG3 52 aa4.92□□□□□ -1.62
Sf1-208ENSMUST00000131252 Ush2AQ2QI47 5193 aa4.87□□□□□ -1.63
Sf1-208ENSMUST00000131252 Ubr4A2AN08 5180 aa4.87□□□□□ -1.63
Sf1-208ENSMUST00000131252 2310046K23RikA0A0A6YVW6 87 aa4.87□□□□□ -1.63
Sf1-208ENSMUST00000131252 Krtap8-1O08633 61 aa4.87□□□□□ -1.63
Sf1-208ENSMUST00000131252 Krtap1-3A2A588 173 aa4.81□□□□□ -1.64
Sf1-208ENSMUST00000131252 4932415D10RikA0A1W2P6U8 4986 aa4.81□□□□□ -1.64
Sf1-208ENSMUST00000131252 Hmcn2A2AJ76 5100 aa4.7□□□□□ -1.66
Sf1-208ENSMUST00000131252 ZanO88799 5376 aa4.61□□□□□ -1.67
Sf1-208ENSMUST00000131252 Lce1jD3YUU5 139 aa4.6□□□□□ -1.67
Sf1-208ENSMUST00000131252 Fat4Q2PZL6 4981 aa4.59□□□□□ -1.67
Sf1-208ENSMUST00000131252 Krtap9-5A2A5X3 358 aa4.56□□□□□ -1.68
Sf1-208ENSMUST00000131252 Gm6358A0A087WPH4 74 aa4.53□□□□□ -1.68
Sf1-208ENSMUST00000131252 Gm10061D3Z714 54 aa4.5□□□□□ -1.69
Sf1-208ENSMUST00000131252 Krtap19-2Q925I0 141 aa4.45□□□□□ -1.7
Sf1-208ENSMUST00000131252 Rnf213E9Q555 5152 aaKnown RBP4.44□□□□□ -1.7
Sf1-208ENSMUST00000131252 Gm11569B1AQB1 180 aa4.38□□□□□ -1.71
Sf1-208ENSMUST00000131252 Mt2P02798 61 aa4.38□□□□□ -1.71
Sf1-208ENSMUST00000131252 Sprr2gO70558 76 aa4.32□□□□□ -1.72
Sf1-208ENSMUST00000131252 Gm10272F7CZ33 110 aa4.32□□□□□ -1.72
Sf1-208ENSMUST00000131252 Gm10100J3QK64 120 aa4.31□□□□□ -1.72
Sf1-208ENSMUST00000131252 Krtap31-1Q9D644 177 aa4.31□□□□□ -1.72
Sf1-208ENSMUST00000131252 Lce1iQ9D6P5 149 aa4.29□□□□□ -1.72
Sf1-208ENSMUST00000131252 Mdn1A2ANY6 5589 aaKnown RBP4.28□□□□□ -1.72
Sf1-208ENSMUST00000131252 Syne1Q6ZWR6 8799 aa4.27□□□□□ -1.73
Sf1-208ENSMUST00000131252 Krtap22-2J3QNX6 67 aa4.26□□□□□ -1.73
Sf1-208ENSMUST00000131252 Lce1a2Q9D1K4 149 aa4.24□□□□□ -1.73
Sf1-208ENSMUST00000131252 Krtap9-3Q3V2C1 136 aa4.23□□□□□ -1.73
Sf1-208ENSMUST00000131252 Krtap17-1A2A5X6 109 aa4.23□□□□□ -1.73
Sf1-208ENSMUST00000131252 Gm10142J3KMP7 120 aa4.23□□□□□ -1.73
Sf1-208ENSMUST00000131252 Lce3bQ9CQM7 98 aa4.23□□□□□ -1.73
Sf1-208ENSMUST00000131252 Krtap4-2B1AQ85 167 aa4.19□□□□□ -1.74
Sf1-208ENSMUST00000131252 Lce1hQ9D6R3 140 aa4.16□□□□□ -1.74
Sf1-208ENSMUST00000131252 SspoQ8CG65 4998 aa4.14□□□□□ -1.75
Sf1-208ENSMUST00000131252 Lce1gQ9D195 139 aa4.12□□□□□ -1.75
Sf1-208ENSMUST00000131252 Sprr2dO70555 85 aa4.09□□□□□ -1.75
Sf1-208ENSMUST00000131252 Krtap19-4Q925H7 84 aa4.09□□□□□ -1.75
Sf1-208ENSMUST00000131252 Lce3cQ91V05 98 aa4.09□□□□□ -1.76
Sf1-208ENSMUST00000131252 Krtap4-6Q3V4B7 195 aa4.08□□□□□ -1.76
Sf1-208ENSMUST00000131252 Gm11938Q9D3H4 131 aa4.03□□□□□ -1.76
Sf1-208ENSMUST00000131252 Lce3dE9Q8V1 98 aa4.02□□□□□ -1.77
Sf1-208ENSMUST00000131252 Lce3eF8VQJ0 98 aa4.02□□□□□ -1.77
Sf1-208ENSMUST00000131252 Lce3fQ6PAI4 98 aa4.02□□□□□ -1.77
Sf1-208ENSMUST00000131252 Muc5bE9Q5I3 4800 aa4□□□□□ -1.77
Sf1-208ENSMUST00000131252 Gm11596B1AQB0 205 aa3.98□□□□□ -1.77
Sf1-208ENSMUST00000131252 Sprr2kO70562 68 aa3.98□□□□□ -1.77
Sf1-208ENSMUST00000131252 Syne2Q6ZWQ0 6874 aaKnown RBP3.97□□□□□ -1.77
Sf1-208ENSMUST00000131252 Krtap4-1Q3UUY3 169 aa3.96□□□□□ -1.78
Sf1-208ENSMUST00000131252 Muc16A0A140LJ72 8478 aa3.96□□□□□ -1.78
Sf1-208ENSMUST00000131252 Lce1dQ9D731 133 aa3.93□□□□□ -1.78
Sf1-208ENSMUST00000131252 Lce3aQ497I5 98 aa3.93□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 157.5 ms