RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 Gm19935A0A1B0GSF9 52 aa10.23□□□□□ -0.77
Tpm1-211ENSMUST00000113695 Krtap1-5A2A590 122 aa10.23□□□□□ -0.77
Tpm1-211ENSMUST00000113695 Rnf213E9Q555 5152 aaKnown RBP10.21□□□□□ -0.78
Tpm1-211ENSMUST00000113695 Cox6b2Q80ZN9 88 aa10.2□□□□□ -0.78
Tpm1-211ENSMUST00000113695 Smim20D3Z7Q2 69 aa10.18□□□□□ -0.78
Tpm1-211ENSMUST00000113695 Gm21887J3QQ04 176 aa10.15□□□□□ -0.79
Tpm1-211ENSMUST00000113695 Cdc42se1Q8BHL7 80 aa10.14□□□□□ -0.79
Tpm1-211ENSMUST00000113695 Krtap3-1A2A591 98 aa10.13□□□□□ -0.79
Tpm1-211ENSMUST00000113695 Gm20661K7N787 53 aa10.08□□□□□ -0.8
Tpm1-211ENSMUST00000113695 Gm17606F6ZL36 78 aa10.07□□□□□ -0.8
Tpm1-211ENSMUST00000113695 Gm11555B1AQ89 175 aa10.01□□□□□ -0.81
Tpm1-211ENSMUST00000113695 Serp1Q9Z1W5 66 aa9.98□□□□□ -0.81
Tpm1-211ENSMUST00000113695 SmcpP15265 143 aa9.97□□□□□ -0.81
Tpm1-211ENSMUST00000113695 Gm10197F6QEY5 67 aa9.96□□□□□ -0.81
Tpm1-211ENSMUST00000113695 H2al1aQ5M8Q2 105 aa9.96□□□□□ -0.81
Tpm1-211ENSMUST00000113695 H2al1eQ810S6 105 aa9.96□□□□□ -0.81
Tpm1-211ENSMUST00000113695 Phxr4P15974 95 aa9.9□□□□□ -0.82
Tpm1-211ENSMUST00000113695 Brk1Q91VR8 75 aa9.9□□□□□ -0.82
Tpm1-211ENSMUST00000113695 Gm10061D3Z714 54 aa9.89□□□□□ -0.83
Tpm1-211ENSMUST00000113695 Pcp4P63054 62 aa9.86□□□□□ -0.83
Tpm1-211ENSMUST00000113695 Uqcr11Q9CPX8 56 aa9.85□□□□□ -0.83
Tpm1-211ENSMUST00000113695 BC029722A0A0N4SW31 51 aa9.82□□□□□ -0.84
Tpm1-211ENSMUST00000113695 Gm20537G3UYK7 97 aa9.82□□□□□ -0.84
Tpm1-211ENSMUST00000113695 Gm19426M0QWC7 77 aa9.82□□□□□ -0.84
Tpm1-211ENSMUST00000113695 Rps28P62858 69 aaKnown RBP9.82□□□□□ -0.84
Tpm1-211ENSMUST00000113695 Gm10382Q3V0T5 144 aa9.82□□□□□ -0.84
Tpm1-211ENSMUST00000113695 SspoQ8CG65 4998 aa9.8□□□□□ -0.84
Tpm1-211ENSMUST00000113695 H2al1bA0A087WP11 105 aa9.77□□□□□ -0.85
Tpm1-211ENSMUST00000113695 Limd2Q8BGB5 128 aa9.76□□□□□ -0.85
Tpm1-211ENSMUST00000113695 Krtap4-2B1AQ85 167 aa9.75□□□□□ -0.85
Tpm1-211ENSMUST00000113695 Ndufb1P0DN34 57 aa9.7□□□□□ -0.86
Tpm1-211ENSMUST00000113695 Sec61gP60060 68 aa9.68□□□□□ -0.86
Tpm1-211ENSMUST00000113695 CriptO70333 101 aa9.54□□□□□ -0.88
Tpm1-211ENSMUST00000113695 Gm11569B1AQB1 180 aa9.52□□□□□ -0.89
Tpm1-211ENSMUST00000113695 Krtap12-1Q9Z287 130 aa9.52□□□□□ -0.89
Tpm1-211ENSMUST00000113695 Lce1jD3YUU5 139 aa9.47□□□□□ -0.89
Tpm1-211ENSMUST00000113695 Gm9955Q8CEJ8 102 aa9.46□□□□□ -0.89
Tpm1-211ENSMUST00000113695 Spink7Q6IE32 76 aa9.43□□□□□ -0.9
Tpm1-211ENSMUST00000113695 Krtap19-2Q925I0 141 aa9.4□□□□□ -0.9
Tpm1-211ENSMUST00000113695 Krtap19-9aF8WH65 55 aa9.37□□□□□ -0.91
Tpm1-211ENSMUST00000113695 Krtap9-5A2A5X3 358 aa9.35□□□□□ -0.91
Tpm1-211ENSMUST00000113695 B930094E09RikQ8C4T2 136 aa9.34□□□□□ -0.91
Tpm1-211ENSMUST00000113695 SvipQ3UZP4 77 aa9.27□□□□□ -0.92
Tpm1-211ENSMUST00000113695 Pla2g10Q9QXX3 151 aa9.26□□□□□ -0.93
Tpm1-211ENSMUST00000113695 Gm17402F6Z0L5 76 aa9.25□□□□□ -0.93
Tpm1-211ENSMUST00000113695 Krtap17-1A2A5X6 109 aa9.22□□□□□ -0.93
Tpm1-211ENSMUST00000113695 Prm2P07978 107 aa9.22□□□□□ -0.93
Tpm1-211ENSMUST00000113695 Sprr2a3Q4KL71 83 aa9.14□□□□□ -0.95
Tpm1-211ENSMUST00000113695 Sprr2a1Q9CQK8 83 aa9.14□□□□□ -0.95
Tpm1-211ENSMUST00000113695 Sox16Q62247 57 aa9.12□□□□□ -0.95
Tpm1-211ENSMUST00000113695 Muc5bE9Q5I3 4800 aa9.09□□□□□ -0.95
Tpm1-211ENSMUST00000113695 Gm11562A0PK51 136 aa9.06□□□□□ -0.96
Tpm1-211ENSMUST00000113695 H2al1kJ3QP08 105 aa9.02□□□□□ -0.97
Tpm1-211ENSMUST00000113695 4933415A04RikQ9D443 101 aa9.02□□□□□ -0.97
Tpm1-211ENSMUST00000113695 Lce1gQ9D195 139 aa8.98□□□□□ -0.97
Tpm1-211ENSMUST00000113695 A0A1Y7VJH8 109 aa8.96□□□□□ -0.98
Tpm1-211ENSMUST00000113695 Gm6358A0A087WPH4 74 aa8.94□□□□□ -0.98
Tpm1-211ENSMUST00000113695 Lce1iQ9D6P5 149 aa8.89□□□□□ -0.99
Tpm1-211ENSMUST00000113695 H2al1mQ9DAD9 105 aa8.84□□□□□ -0.99
Tpm1-211ENSMUST00000113695 Gm3880A0A1B0GSB3 72 aa8.78□□□□□ -1
Tpm1-211ENSMUST00000113695 Gm10337F7DEP7 55 aa8.77□□□□□ -1.01
Tpm1-211ENSMUST00000113695 Ndufs5Q99LY9 106 aa8.77□□□□□ -1.01
Tpm1-211ENSMUST00000113695 Lce1a2Q9D1K4 149 aa8.75□□□□□ -1.01
Tpm1-211ENSMUST00000113695 Gm19668J3QMD1 248 aa8.74□□□□□ -1.01
Tpm1-211ENSMUST00000113695 Krtap4-6Q3V4B7 195 aa8.69□□□□□ -1.02
Tpm1-211ENSMUST00000113695 Krtap31-2Q8CAY5 177 aa8.67□□□□□ -1.02
Tpm1-211ENSMUST00000113695 Gm11596B1AQB0 205 aa8.66□□□□□ -1.02
Tpm1-211ENSMUST00000113695 Gm3646F6S692 53 aa8.64□□□□□ -1.03
Tpm1-211ENSMUST00000113695 Syne2Q6ZWQ0 6874 aaKnown RBP8.61□□□□□ -1.03
Tpm1-211ENSMUST00000113695 Mt2P02798 61 aa8.61□□□□□ -1.03
Tpm1-211ENSMUST00000113695 Krtap28-10A0A1Y7VP58 119 aa8.58□□□□□ -1.04
Tpm1-211ENSMUST00000113695 Mdn1A2ANY6 5589 aaKnown RBP8.57□□□□□ -1.04
Tpm1-211ENSMUST00000113695 Camk2n1Q6QWF9 78 aa8.51□□□□□ -1.05
Tpm1-211ENSMUST00000113695 A0A1Y7VLE6 161 aa8.49□□□□□ -1.05
Tpm1-211ENSMUST00000113695 Gm12216A0A1W2P827 62 aa8.48□□□□□ -1.05
Tpm1-211ENSMUST00000113695 Krtap28-13A0A087WQP5 138 aa8.41□□□□□ -1.06
Tpm1-211ENSMUST00000113695 Krtap8-1O08633 61 aa8.38□□□□□ -1.07
Tpm1-211ENSMUST00000113695 Romo1P60603 79 aa8.35□□□□□ -1.07
Tpm1-211ENSMUST00000113695 Gm11564A2A4L9 201 aa8.32□□□□□ -1.08
Tpm1-211ENSMUST00000113695 Gm11595B1AQA7 289 aa8.32□□□□□ -1.08
Tpm1-211ENSMUST00000113695 Krtap4-8B1AQA8 209 aa8.32□□□□□ -1.08
Tpm1-211ENSMUST00000113695 Krtap19-9bQ99NG9 58 aa8.29□□□□□ -1.08
Tpm1-211ENSMUST00000113695 A030005K14RikA0A1Y7VNY1 122 aa8.25□□□□□ -1.09
Tpm1-211ENSMUST00000113695 Krtap31-1Q9D644 177 aa8.23□□□□□ -1.09
Tpm1-211ENSMUST00000113695 Krtap22-2J3QNX6 67 aa8.2□□□□□ -1.1
Tpm1-211ENSMUST00000113695 Krtap9-3Q3V2C1 136 aa8.16□□□□□ -1.1
Tpm1-211ENSMUST00000113695 Krtap4-9B1AQA9 244 aa8.08□□□□□ -1.12
Tpm1-211ENSMUST00000113695 Lce1hQ9D6R3 140 aa8.04□□□□□ -1.12
Tpm1-211ENSMUST00000113695 Mt4P47945 62 aa8.03□□□□□ -1.12
Tpm1-211ENSMUST00000113695 Lce1bQ9D149 137 aa7.9□□□□□ -1.14
Tpm1-211ENSMUST00000113695 A030005L19RikA0A1Y7VIU2 113 aa7.81□□□□□ -1.16
Tpm1-211ENSMUST00000113695 Gm38119A0A0A6YX29 146 aa7.81□□□□□ -1.16
Tpm1-211ENSMUST00000113695 Fsip2A2ARZ3 6995 aa7.8□□□□□ -1.16
Tpm1-211ENSMUST00000113695 Krtap4-13Q9D7P3 165 aa7.77□□□□□ -1.17
Tpm1-211ENSMUST00000113695 Sprr2kO70562 68 aa7.67□□□□□ -1.18
Tpm1-211ENSMUST00000113695 Krtap7-1Q9D3I6 87 aa7.67□□□□□ -1.18
Tpm1-211ENSMUST00000113695 Gm40193A0A1B0GT39 78 aa7.63□□□□□ -1.19
Tpm1-211ENSMUST00000113695 Krtap6-3A0A087WQL6 57 aa7.61□□□□□ -1.19
Tpm1-211ENSMUST00000113695 2300003K06RikA2A4M0 262 aa7.6□□□□□ -1.19
Tpm1-211ENSMUST00000113695 Tnp1P10856 55 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms