RNA–Protein interactions for RNA: ENSMUST00000113687.7

Tpm1-207, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 962 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-207ENSMUST00000113687 Defb1P56386 69 aa5.95□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Atp5eP56382 52 aa5.94□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Krtap3-1A2A591 98 aa5.93□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Lce1gQ9D195 139 aa5.93□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Spint4Q9D263 159 aa5.91□□□□□ -1.46
Tpm1-207ENSMUST00000113687 A030005L19RikA0A1Y7VIU2 113 aa5.9□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Gm21887J3QQ04 176 aa5.9□□□□□ -1.46
Tpm1-207ENSMUST00000113687 Coa6Q8BGD8 79 aa5.9□□□□□ -1.46
Tpm1-207ENSMUST00000113687 B230307C23RikQ8BLB2 64 aa5.88□□□□□ -1.47
Tpm1-207ENSMUST00000113687 Serp2Q6TAW2 65 aa5.87□□□□□ -1.47
Tpm1-207ENSMUST00000113687 Gm19426M0QWC7 77 aa5.86□□□□□ -1.47
Tpm1-207ENSMUST00000113687 A0A1Y7VJ07 166 aa5.85□□□□□ -1.47
Tpm1-207ENSMUST00000113687 Krtap9-5A2A5X3 358 aa5.85□□□□□ -1.47
Tpm1-207ENSMUST00000113687 Lce1jD3YUU5 139 aa5.85□□□□□ -1.47
Tpm1-207ENSMUST00000113687 B930094E09RikQ8C4T2 136 aa5.84□□□□□ -1.47
Tpm1-207ENSMUST00000113687 Krtap19-2Q925I0 141 aa5.83□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Gm7544A0A1Y7VJ58 118 aa5.81□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Cox6b2Q80ZN9 88 aa5.81□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Anapc13Q8R034 74 aa5.8□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Krtap12-1Q9Z287 130 aa5.79□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Muc5bE9Q5I3 4800 aa5.78□□□□□ -1.48
Tpm1-207ENSMUST00000113687 Syne2Q6ZWQ0 6874 aaKnown RBP5.77□□□□□ -1.49
Tpm1-207ENSMUST00000113687 Gm10643Q3URG9 111 aa5.77□□□□□ -1.49
Tpm1-207ENSMUST00000113687 Gm17606F6ZL36 78 aa5.76□□□□□ -1.49
Tpm1-207ENSMUST00000113687 Coa5Q99M07 74 aa5.74□□□□□ -1.49
Tpm1-207ENSMUST00000113687 Gm11596B1AQB0 205 aa5.72□□□□□ -1.49
Tpm1-207ENSMUST00000113687 A030014E15RikA0A1Y7VJV2 120 aa5.71□□□□□ -1.5
Tpm1-207ENSMUST00000113687 BC029722A0A0N4SW31 51 aa5.7□□□□□ -1.5
Tpm1-207ENSMUST00000113687 SptssbQ925E8 76 aa5.7□□□□□ -1.5
Tpm1-207ENSMUST00000113687 Pla2g10Q9QXX3 151 aa5.7□□□□□ -1.5
Tpm1-207ENSMUST00000113687 Gm10382Q3V0T5 144 aa5.69□□□□□ -1.5
Tpm1-207ENSMUST00000113687 Krtap4-6Q3V4B7 195 aa5.69□□□□□ -1.5
Tpm1-207ENSMUST00000113687 Prm2P07978 107 aa5.67□□□□□ -1.5
Tpm1-207ENSMUST00000113687 Krtap19-9aF8WH65 55 aa5.64□□□□□ -1.51
Tpm1-207ENSMUST00000113687 Gm20537G3UYK7 97 aa5.63□□□□□ -1.51
Tpm1-207ENSMUST00000113687 Mdn1A2ANY6 5589 aaKnown RBP5.63□□□□□ -1.51
Tpm1-207ENSMUST00000113687 Krtap31-2Q8CAY5 177 aa5.61□□□□□ -1.51
Tpm1-207ENSMUST00000113687 Gm6358A0A087WPH4 74 aa5.58□□□□□ -1.52
Tpm1-207ENSMUST00000113687 Spink7Q6IE32 76 aa5.58□□□□□ -1.52
Tpm1-207ENSMUST00000113687 Gm20661K7N787 53 aa5.55□□□□□ -1.52
Tpm1-207ENSMUST00000113687 CriptO70333 101 aa5.55□□□□□ -1.52
Tpm1-207ENSMUST00000113687 SnurfQ9WU12 71 aa5.52□□□□□ -1.53
Tpm1-207ENSMUST00000113687 Smim20D3Z7Q2 69 aa5.51□□□□□ -1.53
Tpm1-207ENSMUST00000113687 Limd2Q8BGB5 128 aa5.51□□□□□ -1.53
Tpm1-207ENSMUST00000113687 Smlr1J3QMJ4 66 aa5.49□□□□□ -1.53
Tpm1-207ENSMUST00000113687 Lce1iQ9D6P5 149 aa5.48□□□□□ -1.53
Tpm1-207ENSMUST00000113687 Gm11564A2A4L9 201 aa5.45□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Gm11595B1AQA7 289 aa5.45□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Krtap4-8B1AQA8 209 aa5.45□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Gm19668J3QMD1 248 aa5.45□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Pet100P0DJE0 76 aa5.44□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Gm38119A0A0A6YX29 146 aa5.43□□□□□ -1.54
Tpm1-207ENSMUST00000113687 H2al1aQ5M8Q2 105 aa5.42□□□□□ -1.54
Tpm1-207ENSMUST00000113687 H2al1eQ810S6 105 aa5.42□□□□□ -1.54
Tpm1-207ENSMUST00000113687 Cdc42se1Q8BHL7 80 aa5.39□□□□□ -1.55
Tpm1-207ENSMUST00000113687 Lce1a2Q9D1K4 149 aa5.39□□□□□ -1.55
Tpm1-207ENSMUST00000113687 Gm10197F6QEY5 67 aa5.37□□□□□ -1.55
Tpm1-207ENSMUST00000113687 Tmem258P61166 79 aa5.35□□□□□ -1.55
Tpm1-207ENSMUST00000113687 Sec61gP60060 68 aa5.33□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Serp1Q9Z1W5 66 aa5.33□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Mt2P02798 61 aa5.31□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Uqcr11Q9CPX8 56 aa5.3□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Krtap4-9B1AQA9 244 aa5.29□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Phxr4P15974 95 aa5.29□□□□□ -1.56
Tpm1-207ENSMUST00000113687 H2al1bA0A087WP11 105 aa5.28□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Gm19935A0A1B0GSF9 52 aa5.28□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Sprr2a3Q4KL71 83 aa5.28□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Sprr2a1Q9CQK8 83 aa5.28□□□□□ -1.56
Tpm1-207ENSMUST00000113687 Gm9955Q8CEJ8 102 aa5.27□□□□□ -1.57
Tpm1-207ENSMUST00000113687 Lce1hQ9D6R3 140 aa5.27□□□□□ -1.57
Tpm1-207ENSMUST00000113687 Krtap31-1Q9D644 177 aa5.25□□□□□ -1.57
Tpm1-207ENSMUST00000113687 Mt4P47945 62 aa5.23□□□□□ -1.57
Tpm1-207ENSMUST00000113687 Brk1Q91VR8 75 aa5.22□□□□□ -1.57
Tpm1-207ENSMUST00000113687 Krtap8-1O08633 61 aa5.2□□□□□ -1.58
Tpm1-207ENSMUST00000113687 Gm17402F6Z0L5 76 aa5.19□□□□□ -1.58
Tpm1-207ENSMUST00000113687 Lce1dQ9D731 133 aa5.16□□□□□ -1.58
Tpm1-207ENSMUST00000113687 Fsip2A2ARZ3 6995 aa5.14□□□□□ -1.59
Tpm1-207ENSMUST00000113687 Ndufb1P0DN34 57 aa5.14□□□□□ -1.59
Tpm1-207ENSMUST00000113687 Krtap9-3Q3V2C1 136 aa5.14□□□□□ -1.59
Tpm1-207ENSMUST00000113687 Lce1a1Q9CQH5 143 aa5.14□□□□□ -1.59
Tpm1-207ENSMUST00000113687 Lce1bQ9D149 137 aa5.13□□□□□ -1.59
Tpm1-207ENSMUST00000113687 Krtap4-13Q9D7P3 165 aa5.11□□□□□ -1.59
Tpm1-207ENSMUST00000113687 SmcpP15265 143 aa5.08□□□□□ -1.6
Tpm1-207ENSMUST00000113687 Krtap22-2J3QNX6 67 aa5.04□□□□□ -1.6
Tpm1-207ENSMUST00000113687 Krtap6-3A0A087WQL6 57 aa4.99□□□□□ -1.61
Tpm1-207ENSMUST00000113687 Sprr2kO70562 68 aa4.98□□□□□ -1.61
Tpm1-207ENSMUST00000113687 A030003K21RikA0A1Y7VIM3 128 aa4.96□□□□□ -1.62
Tpm1-207ENSMUST00000113687 Rps28P62858 69 aaKnown RBP4.95□□□□□ -1.62
Tpm1-207ENSMUST00000113687 2300003K06RikA2A4M0 262 aa4.93□□□□□ -1.62
Tpm1-207ENSMUST00000113687 Camk2n1Q6QWF9 78 aa4.89□□□□□ -1.63
Tpm1-207ENSMUST00000113687 Lce1eQ9D139 143 aa4.88□□□□□ -1.63
Tpm1-207ENSMUST00000113687 Gm3880A0A1B0GSB3 72 aa4.87□□□□□ -1.63
Tpm1-207ENSMUST00000113687 Krtap19-9bQ99NG9 58 aa4.87□□□□□ -1.63
Tpm1-207ENSMUST00000113687 Lce1lQ9D1G7 135 aa4.87□□□□□ -1.63
Tpm1-207ENSMUST00000113687 H2al1kJ3QP08 105 aa4.83□□□□□ -1.64
Tpm1-207ENSMUST00000113687 H2al1mQ9DAD9 105 aa4.76□□□□□ -1.65
Tpm1-207ENSMUST00000113687 Gm6217A0A1Y7VJK9 128 aa4.74□□□□□ -1.65
Tpm1-207ENSMUST00000113687 Gm11559Q9D3H7 191 aa4.69□□□□□ -1.66
Tpm1-207ENSMUST00000113687 Ndufs5Q99LY9 106 aa4.67□□□□□ -1.66
Tpm1-207ENSMUST00000113687 4933415A04RikQ9D443 101 aa4.66□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms