RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Dync1h1Q9JHU4 4644 aaKnown RBP9.12□□□□□ -0.95
Nckap1-202ENSMUST00000111760 4933428G20RikQ9D3X4 101 aa9.1□□□□□ -0.95
Nckap1-202ENSMUST00000111760 SacsQ9JLC8 4582 aa9.07□□□□□ -0.96
Nckap1-202ENSMUST00000111760 Kmt2aP55200 3966 aa9.05□□□□□ -0.96
Nckap1-202ENSMUST00000111760 Dnah2P0C6F1 4456 aa9.04□□□□□ -0.96
Nckap1-202ENSMUST00000111760 Ryr3A2AGL3 4863 aa9.01□□□□□ -0.97
Nckap1-202ENSMUST00000111760 Sprr2a3Q4KL71 83 aa8.97□□□□□ -0.97
Nckap1-202ENSMUST00000111760 Sprr2a1Q9CQK8 83 aa8.97□□□□□ -0.97
Nckap1-202ENSMUST00000111760 LorP18165 486 aa8.94□□□□□ -0.98
Nckap1-202ENSMUST00000111760 Gm18596A0A1W2P860 280 aa8.9□□□□□ -0.98
Nckap1-202ENSMUST00000111760 HydinQ80W93 5154 aa8.88□□□□□ -0.99
Nckap1-202ENSMUST00000111760 Krtap1-4Q3V2D6 188 aa8.88□□□□□ -0.99
Nckap1-202ENSMUST00000111760 Krtap7-1Q9D3I6 87 aa8.85□□□□□ -0.99
Nckap1-202ENSMUST00000111760 Dnah6E9Q0B6 4144 aa8.84□□□□□ -0.99
Nckap1-202ENSMUST00000111760 Dnah3Q8BW94 4083 aa8.82□□□□□ -1
Nckap1-202ENSMUST00000111760 Krtap19-9aF8WH65 55 aa8.81□□□□□ -1
Nckap1-202ENSMUST00000111760 Lrp1Q91ZX7 4545 aaKnown RBP8.8□□□□□ -1
Nckap1-202ENSMUST00000111760 Kiaa1109A2AAE1 5005 aa8.79□□□□□ -1
Nckap1-202ENSMUST00000111760 Dnah1E9Q8T7 4250 aa8.79□□□□□ -1
Nckap1-202ENSMUST00000111760 Gm19402J3QJV4 266 aa8.76□□□□□ -1.01
Nckap1-202ENSMUST00000111760 Fat3Q8BNA6 4555 aa8.73□□□□□ -1.01
Nckap1-202ENSMUST00000111760 Herc2Q4U2R1 4836 aa8.71□□□□□ -1.02
Nckap1-202ENSMUST00000111760 Gm6358A0A087WPH4 74 aa8.71□□□□□ -1.02
Nckap1-202ENSMUST00000111760 Fat1A0A1L1SQU7 4645 aa8.68□□□□□ -1.02
Nckap1-202ENSMUST00000111760 Hectd4E9Q2E4 4418 aa8.64□□□□□ -1.03
Nckap1-202ENSMUST00000111760 Lrp2A2ARV4 4660 aa8.64□□□□□ -1.03
Nckap1-202ENSMUST00000111760 Krtap12-1Q9Z287 130 aa8.62□□□□□ -1.03
Nckap1-202ENSMUST00000111760 Pkd1O08852 4293 aa8.55□□□□□ -1.04
Nckap1-202ENSMUST00000111760 Lce1mQ9CR91 182 aa8.47□□□□□ -1.05
Nckap1-202ENSMUST00000111760 Krtap16-3Q8C1I6 86 aa8.47□□□□□ -1.05
Nckap1-202ENSMUST00000111760 Krtap19-9bQ99NG9 58 aa8.45□□□□□ -1.06
Nckap1-202ENSMUST00000111760 Dnah7cA0A087WR13 4024 aa8.42□□□□□ -1.06
Nckap1-202ENSMUST00000111760 Krtap8-1O08633 61 aa8.42□□□□□ -1.06
Nckap1-202ENSMUST00000111760 Dnah8Q91XQ0 4731 aa8.42□□□□□ -1.06
Nckap1-202ENSMUST00000111760 Krtap19-3Q925H6 87 aa8.42□□□□□ -1.06
Nckap1-202ENSMUST00000111760 Vps13bQ80TY5 3993 aa8.37□□□□□ -1.07
Nckap1-202ENSMUST00000111760 Ryr2E9Q401 4966 aaKnown RBP8.37□□□□□ -1.07
Nckap1-202ENSMUST00000111760 Dnah7aE9Q0T8 4024 aa8.32□□□□□ -1.08
Nckap1-202ENSMUST00000111760 Fras1Q80T14 4010 aa8.32□□□□□ -1.08
Nckap1-202ENSMUST00000111760 Krtap19-1Q925H2 87 aa8.3□□□□□ -1.08
Nckap1-202ENSMUST00000111760 Fat2Q5F226 4351 aa8.14□□□□□ -1.11
Nckap1-202ENSMUST00000111760 Krtap9-5A2A5X3 358 aa8.1□□□□□ -1.11
Nckap1-202ENSMUST00000111760 Kmt2cQ8BRH4 4903 aa8.09□□□□□ -1.11
Nckap1-202ENSMUST00000111760 PcloQ9QYX7 5068 aa8.08□□□□□ -1.12
Nckap1-202ENSMUST00000111760 Sprr2kO70562 68 aa8.03□□□□□ -1.12
Nckap1-202ENSMUST00000111760 Dnhd1D3Z2X2 4750 aa8.02□□□□□ -1.13
Nckap1-202ENSMUST00000111760 Prm1P02319 51 aa8.01□□□□□ -1.13
Nckap1-202ENSMUST00000111760 Abca13Q5SSE9 5034 aa7.93□□□□□ -1.14
Nckap1-202ENSMUST00000111760 Krtap1-3A2A588 173 aa7.87□□□□□ -1.15
Nckap1-202ENSMUST00000111760 Birc6O88738 4882 aa7.83□□□□□ -1.16
Nckap1-202ENSMUST00000111760 Gm7735D3YX18 52 aa7.83□□□□□ -1.16
Nckap1-202ENSMUST00000111760 Lce1jD3YUU5 139 aa7.77□□□□□ -1.17
Nckap1-202ENSMUST00000111760 Pkhd1E9PZ36 4059 aa7.74□□□□□ -1.17
Nckap1-202ENSMUST00000111760 Mdn1A2ANY6 5589 aaKnown RBP7.74□□□□□ -1.17
Nckap1-202ENSMUST00000111760 Krtap19-2Q925I0 141 aa7.73□□□□□ -1.17
Nckap1-202ENSMUST00000111760 Herc1E9PZP8 4859 aa7.7□□□□□ -1.18
Nckap1-202ENSMUST00000111760 Mt2P02798 61 aa7.69□□□□□ -1.18
Nckap1-202ENSMUST00000111760 Gm9789Q8BIG3 52 aa7.68□□□□□ -1.18
Nckap1-202ENSMUST00000111760 Gm10272F7CZ33 110 aa7.58□□□□□ -1.2
Nckap1-202ENSMUST00000111760 Gm10100J3QK64 120 aa7.56□□□□□ -1.2
Nckap1-202ENSMUST00000111760 Krtap22-2J3QNX6 67 aa7.55□□□□□ -1.2
Nckap1-202ENSMUST00000111760 Lce3bQ9CQM7 98 aa7.51□□□□□ -1.21
Nckap1-202ENSMUST00000111760 Pkhd1l1Q80ZA4 4249 aa7.51□□□□□ -1.21
Nckap1-202ENSMUST00000111760 2310046K23RikA0A0A6YVW6 87 aa7.51□□□□□ -1.21
Nckap1-202ENSMUST00000111760 Sprr2gO70558 76 aa7.51□□□□□ -1.21
Nckap1-202ENSMUST00000111760 Syne1Q6ZWR6 8799 aa7.49□□□□□ -1.21
Nckap1-202ENSMUST00000111760 Lce3cQ91V05 98 aa7.47□□□□□ -1.21
Nckap1-202ENSMUST00000111760 4932415D10RikA0A1W2P6U8 4986 aa7.43□□□□□ -1.22
Nckap1-202ENSMUST00000111760 Ubr4A2AN08 5180 aa7.43□□□□□ -1.22
Nckap1-202ENSMUST00000111760 Gm10061D3Z714 54 aa7.39□□□□□ -1.23
Nckap1-202ENSMUST00000111760 Gm10142J3KMP7 120 aa7.29□□□□□ -1.24
Nckap1-202ENSMUST00000111760 Fat4Q2PZL6 4981 aa7.28□□□□□ -1.24
Nckap1-202ENSMUST00000111760 Lce3eF8VQJ0 98 aa7.25□□□□□ -1.25
Nckap1-202ENSMUST00000111760 Lce3fQ6PAI4 98 aa7.25□□□□□ -1.25
Nckap1-202ENSMUST00000111760 Rnf213E9Q555 5152 aaKnown RBP7.24□□□□□ -1.25
Nckap1-202ENSMUST00000111760 Gm38119A0A0A6YX29 146 aa7.19□□□□□ -1.26
Nckap1-202ENSMUST00000111760 Gm11569B1AQB1 180 aa7.15□□□□□ -1.27
Nckap1-202ENSMUST00000111760 ZanO88799 5376 aa7.15□□□□□ -1.27
Nckap1-202ENSMUST00000111760 Lce1iQ9D6P5 149 aa7.14□□□□□ -1.27
Nckap1-202ENSMUST00000111760 Ush2AQ2QI47 5193 aa7.12□□□□□ -1.27
Nckap1-202ENSMUST00000111760 Lce3dE9Q8V1 98 aa7.07□□□□□ -1.28
Nckap1-202ENSMUST00000111760 Lce1a2Q9D1K4 149 aa7.04□□□□□ -1.28
Nckap1-202ENSMUST00000111760 Lce3aQ497I5 98 aa7.01□□□□□ -1.29
Nckap1-202ENSMUST00000111760 Krtap17-1A2A5X6 109 aa6.92□□□□□ -1.3
Nckap1-202ENSMUST00000111760 Lce1gQ9D195 139 aa6.89□□□□□ -1.31
Nckap1-202ENSMUST00000111760 Lce1hQ9D6R3 140 aa6.89□□□□□ -1.31
Nckap1-202ENSMUST00000111760 Hmcn2A2AJ76 5100 aa6.85□□□□□ -1.31
Nckap1-202ENSMUST00000111760 Sprr2iO70560 76 aa6.85□□□□□ -1.31
Nckap1-202ENSMUST00000111760 Krtap9-3Q3V2C1 136 aa6.82□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Lce1fB9EJP6 147 aa6.8□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Lce1cQ9D1C5 147 aa6.8□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Lce1lQ9D1G7 135 aa6.8□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Lce1dQ9D731 133 aa6.8□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Muc16A0A140LJ72 8478 aa6.8□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Lce1bQ9D149 137 aa6.79□□□□□ -1.32
Nckap1-202ENSMUST00000111760 Krtap4-6Q3V4B7 195 aa6.75□□□□□ -1.33
Nckap1-202ENSMUST00000111760 Mt4P47945 62 aa6.7□□□□□ -1.34
Nckap1-202ENSMUST00000111760 Lce1eQ9D139 143 aa6.68□□□□□ -1.34
Nckap1-202ENSMUST00000111760 Krtap4-2B1AQ85 167 aa6.67□□□□□ -1.34
Nckap1-202ENSMUST00000111760 Krtap19-4Q925H7 84 aa6.61□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms