RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 LorP18165 486 aa7.02□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 Dnah1E9Q8T7 4250 aa7.02□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 Dnah9B1AR51 4484 aa7□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 SacsQ9JLC8 4582 aa7□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 Dync1h1Q9JHU4 4644 aaKnown RBP6.98□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 ApobE9Q414 4505 aa6.96□□□□□ -1.29
Col4a3bp-202ENSMUST00000109444 TnxbO35452 4006 aa6.9□□□□□ -1.3
Col4a3bp-202ENSMUST00000109444 Xirp2Q4U4S6 3784 aa6.88□□□□□ -1.31
Col4a3bp-202ENSMUST00000109444 Pkd1O08852 4293 aa6.85□□□□□ -1.31
Col4a3bp-202ENSMUST00000109444 2310046K23RikA0A0A6YVW6 87 aa6.85□□□□□ -1.31
Col4a3bp-202ENSMUST00000109444 Dnah7bL7N1Y0 4068 aa6.84□□□□□ -1.31
Col4a3bp-202ENSMUST00000109444 Gm18596A0A1W2P860 280 aa6.81□□□□□ -1.32
Col4a3bp-202ENSMUST00000109444 BsnO88737 3942 aa6.8□□□□□ -1.32
Col4a3bp-202ENSMUST00000109444 Hspg2Q05793 3707 aaKnown RBP6.78□□□□□ -1.32
Col4a3bp-202ENSMUST00000109444 Lrp1bQ9JI18 4599 aa6.78□□□□□ -1.32
Col4a3bp-202ENSMUST00000109444 Krtap16-3Q8C1I6 86 aa6.78□□□□□ -1.32
Col4a3bp-202ENSMUST00000109444 CubnQ9JLB4 3623 aa6.77□□□□□ -1.33
Col4a3bp-202ENSMUST00000109444 PrkdcP97313 4128 aa6.76□□□□□ -1.33
Col4a3bp-202ENSMUST00000109444 Dnah8Q91XQ0 4731 aa6.75□□□□□ -1.33
Col4a3bp-202ENSMUST00000109444 Krtap19-3Q925H6 87 aa6.74□□□□□ -1.33
Col4a3bp-202ENSMUST00000109444 Fat1A0A1L1SQU7 4645 aa6.71□□□□□ -1.33
Col4a3bp-202ENSMUST00000109444 Sprr2kO70562 68 aa6.71□□□□□ -1.34
Col4a3bp-202ENSMUST00000109444 Hectd4E9Q2E4 4418 aa6.71□□□□□ -1.34
Col4a3bp-202ENSMUST00000109444 Csmd3Q80T79 3707 aa6.68□□□□□ -1.34
Col4a3bp-202ENSMUST00000109444 Krtap19-1Q925H2 87 aa6.65□□□□□ -1.34
Col4a3bp-202ENSMUST00000109444 Ryr1E9PZQ0 5035 aa6.62□□□□□ -1.35
Col4a3bp-202ENSMUST00000109444 Kmt2aP55200 3966 aa6.57□□□□□ -1.36
Col4a3bp-202ENSMUST00000109444 Krtap9-5A2A5X3 358 aa6.56□□□□□ -1.36
Col4a3bp-202ENSMUST00000109444 Fras1Q80T14 4010 aa6.53□□□□□ -1.36
Col4a3bp-202ENSMUST00000109444 Mycbp2Q7TPH6 4711 aa6.5□□□□□ -1.37
Col4a3bp-202ENSMUST00000109444 Lce1mQ9CR91 182 aa6.5□□□□□ -1.37
Col4a3bp-202ENSMUST00000109444 Fat3Q8BNA6 4555 aa6.5□□□□□ -1.37
Col4a3bp-202ENSMUST00000109444 Gm10100J3QK64 120 aa6.49□□□□□ -1.37
Col4a3bp-202ENSMUST00000109444 Sprr2gO70558 76 aa6.43□□□□□ -1.38
Col4a3bp-202ENSMUST00000109444 Dnah6E9Q0B6 4144 aa6.43□□□□□ -1.38
Col4a3bp-202ENSMUST00000109444 Lce3bQ9CQM7 98 aa6.41□□□□□ -1.38
Col4a3bp-202ENSMUST00000109444 Ryr2E9Q401 4966 aaKnown RBP6.41□□□□□ -1.38
Col4a3bp-202ENSMUST00000109444 Gm10272F7CZ33 110 aa6.38□□□□□ -1.39
Col4a3bp-202ENSMUST00000109444 Gm10142J3KMP7 120 aa6.36□□□□□ -1.39
Col4a3bp-202ENSMUST00000109444 Prm1P02319 51 aa6.36□□□□□ -1.39
Col4a3bp-202ENSMUST00000109444 Lce3cQ91V05 98 aa6.34□□□□□ -1.39
Col4a3bp-202ENSMUST00000109444 Dnah7aE9Q0T8 4024 aa6.33□□□□□ -1.4
Col4a3bp-202ENSMUST00000109444 Lrp1Q91ZX7 4545 aaKnown RBP6.33□□□□□ -1.4
Col4a3bp-202ENSMUST00000109444 Krtap22-2J3QNX6 67 aa6.31□□□□□ -1.4
Col4a3bp-202ENSMUST00000109444 Mt2P02798 61 aa6.3□□□□□ -1.4
Col4a3bp-202ENSMUST00000109444 Fat2Q5F226 4351 aa6.27□□□□□ -1.41
Col4a3bp-202ENSMUST00000109444 Dnah7cA0A087WR13 4024 aa6.25□□□□□ -1.41
Col4a3bp-202ENSMUST00000109444 Dnhd1D3Z2X2 4750 aa6.23□□□□□ -1.41
Col4a3bp-202ENSMUST00000109444 Herc1E9PZP8 4859 aa6.23□□□□□ -1.41
Col4a3bp-202ENSMUST00000109444 Krtap19-2Q925I0 141 aa6.23□□□□□ -1.41
Col4a3bp-202ENSMUST00000109444 Lce3eF8VQJ0 98 aa6.2□□□□□ -1.42
Col4a3bp-202ENSMUST00000109444 Lce3fQ6PAI4 98 aa6.2□□□□□ -1.42
Col4a3bp-202ENSMUST00000109444 Lce3dE9Q8V1 98 aa6.16□□□□□ -1.42
Col4a3bp-202ENSMUST00000109444 Ryr3A2AGL3 4863 aa6.12□□□□□ -1.43
Col4a3bp-202ENSMUST00000109444 Lce1jD3YUU5 139 aa6.12□□□□□ -1.43
Col4a3bp-202ENSMUST00000109444 Krtap1-3A2A588 173 aa6.09□□□□□ -1.43
Col4a3bp-202ENSMUST00000109444 Lce3aQ497I5 98 aa6.04□□□□□ -1.44
Col4a3bp-202ENSMUST00000109444 Gm7735D3YX18 52 aa6.03□□□□□ -1.44
Col4a3bp-202ENSMUST00000109444 Herc2Q4U2R1 4836 aa6.03□□□□□ -1.44
Col4a3bp-202ENSMUST00000109444 Krtap9-3Q3V2C1 136 aa6.02□□□□□ -1.45
Col4a3bp-202ENSMUST00000109444 Kiaa1109A2AAE1 5005 aa6.02□□□□□ -1.45
Col4a3bp-202ENSMUST00000109444 Krtap19-4Q925H7 84 aa6.01□□□□□ -1.45
Col4a3bp-202ENSMUST00000109444 Vps13bQ80TY5 3993 aa5.97□□□□□ -1.45
Col4a3bp-202ENSMUST00000109444 Gm9789Q8BIG3 52 aa5.97□□□□□ -1.45
Col4a3bp-202ENSMUST00000109444 HydinQ80W93 5154 aa5.96□□□□□ -1.46
Col4a3bp-202ENSMUST00000109444 Pkhd1l1Q80ZA4 4249 aa5.89□□□□□ -1.47
Col4a3bp-202ENSMUST00000109444 Sprr2iO70560 76 aa5.88□□□□□ -1.47
Col4a3bp-202ENSMUST00000109444 Lrp2A2ARV4 4660 aa5.84□□□□□ -1.47
Col4a3bp-202ENSMUST00000109444 Gm10024A0A0A0MQA4 119 aa5.76□□□□□ -1.49
Col4a3bp-202ENSMUST00000109444 Kmt2cQ8BRH4 4903 aa5.75□□□□□ -1.49
Col4a3bp-202ENSMUST00000109444 Gm10061D3Z714 54 aa5.75□□□□□ -1.49
Col4a3bp-202ENSMUST00000109444 Gm38119A0A0A6YX29 146 aa5.71□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1fB9EJP6 147 aa5.69□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1cQ9D1C5 147 aa5.69□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1lQ9D1G7 135 aa5.69□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1dQ9D731 133 aa5.69□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1iQ9D6P5 149 aa5.68□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1gQ9D195 139 aa5.66□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Lce1hQ9D6R3 140 aa5.66□□□□□ -1.5
Col4a3bp-202ENSMUST00000109444 Pkhd1E9PZ36 4059 aa5.63□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 Sprr2dO70555 85 aa5.63□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 Lce1eQ9D139 143 aa5.62□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 Birc6O88738 4882 aa5.62□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 PcloQ9QYX7 5068 aa5.62□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 Lce1bQ9D149 137 aa5.61□□□□□ -1.51
Col4a3bp-202ENSMUST00000109444 Lce1a2Q9D1K4 149 aa5.58□□□□□ -1.52
Col4a3bp-202ENSMUST00000109444 Sprr2hO70559 108 aa5.51□□□□□ -1.53
Col4a3bp-202ENSMUST00000109444 Gm11569B1AQB1 180 aa5.5□□□□□ -1.53
Col4a3bp-202ENSMUST00000109444 Sprr2eO70556 76 aa5.48□□□□□ -1.53
Col4a3bp-202ENSMUST00000109444 Sprr2fO70557 76 aa5.46□□□□□ -1.53
Col4a3bp-202ENSMUST00000109444 Gm11938Q9D3H4 131 aa5.42□□□□□ -1.54
Col4a3bp-202ENSMUST00000109444 Gm11562A0PK51 136 aa5.34□□□□□ -1.55
Col4a3bp-202ENSMUST00000109444 4932415D10RikA0A1W2P6U8 4986 aa5.34□□□□□ -1.55
Col4a3bp-202ENSMUST00000109444 Krtap31-1Q9D644 177 aa5.32□□□□□ -1.56
Col4a3bp-202ENSMUST00000109444 Mdn1A2ANY6 5589 aaKnown RBP5.31□□□□□ -1.56
Col4a3bp-202ENSMUST00000109444 Hmcn2A2AJ76 5100 aa5.25□□□□□ -1.57
Col4a3bp-202ENSMUST00000109444 Syne1Q6ZWR6 8799 aa5.25□□□□□ -1.57
Col4a3bp-202ENSMUST00000109444 Abca13Q5SSE9 5034 aa5.23□□□□□ -1.57
Col4a3bp-202ENSMUST00000109444 Ubr4A2AN08 5180 aa5.18□□□□□ -1.58
Col4a3bp-202ENSMUST00000109444 Mt4P47945 62 aa5.17□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms