RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Gm5767A0A0J9YTU8 78 aa5.85□□□□□ -1.47
Sgcb-201ENSMUST00000081170 Hectd4E9Q2E4 4418 aa5.85□□□□□ -1.47
Sgcb-201ENSMUST00000081170 Dnhd1D3Z2X2 4750 aa5.84□□□□□ -1.47
Sgcb-201ENSMUST00000081170 Birc6O88738 4882 aa5.84□□□□□ -1.47
Sgcb-201ENSMUST00000081170 B930094E09RikQ8C4T2 136 aa5.83□□□□□ -1.48
Sgcb-201ENSMUST00000081170 Gm11939A2A592 99 aa5.78□□□□□ -1.48
Sgcb-201ENSMUST00000081170 Krtap7-1Q9D3I6 87 aa5.78□□□□□ -1.48
Sgcb-201ENSMUST00000081170 Gm9736A0A1W2P7N1 277 aa5.77□□□□□ -1.49
Sgcb-201ENSMUST00000081170 Lrp1bQ9JI18 4599 aa5.75□□□□□ -1.49
Sgcb-201ENSMUST00000081170 BC029722A0A0N4SW31 51 aa5.75□□□□□ -1.49
Sgcb-201ENSMUST00000081170 Herc2Q4U2R1 4836 aa5.72□□□□□ -1.49
Sgcb-201ENSMUST00000081170 Camk2n1Q6QWF9 78 aa5.71□□□□□ -1.5
Sgcb-201ENSMUST00000081170 Fat3Q8BNA6 4555 aa5.63□□□□□ -1.51
Sgcb-201ENSMUST00000081170 Gm10318A0A1W2P728 225 aa5.62□□□□□ -1.51
Sgcb-201ENSMUST00000081170 Abca13Q5SSE9 5034 aa5.61□□□□□ -1.51
Sgcb-201ENSMUST00000081170 Lrp1Q91ZX7 4545 aaKnown RBP5.61□□□□□ -1.51
Sgcb-201ENSMUST00000081170 Gm40193A0A1B0GT39 78 aa5.57□□□□□ -1.52
Sgcb-201ENSMUST00000081170 Mycbp2Q7TPH6 4711 aa5.57□□□□□ -1.52
Sgcb-201ENSMUST00000081170 Gm19402J3QJV4 266 aa5.56□□□□□ -1.52
Sgcb-201ENSMUST00000081170 Krtap3-1A2A591 98 aa5.55□□□□□ -1.52
Sgcb-201ENSMUST00000081170 Lce1mQ9CR91 182 aa5.55□□□□□ -1.52
Sgcb-201ENSMUST00000081170 Kiaa1109A2AAE1 5005 aa5.5□□□□□ -1.53
Sgcb-201ENSMUST00000081170 Krtap13-1Q8K198 168 aa5.5□□□□□ -1.53
Sgcb-201ENSMUST00000081170 Rps29P62274 56 aa5.48□□□□□ -1.53
Sgcb-201ENSMUST00000081170 PcloQ9QYX7 5068 aa5.47□□□□□ -1.53
Sgcb-201ENSMUST00000081170 Krtap19-5O08632 62 aa5.44□□□□□ -1.54
Sgcb-201ENSMUST00000081170 HydinQ80W93 5154 aa5.44□□□□□ -1.54
Sgcb-201ENSMUST00000081170 2210017I01RikA0A0A6YVV1 95 aa5.34□□□□□ -1.55
Sgcb-201ENSMUST00000081170 Crct1Q6PAI5 102 aa5.34□□□□□ -1.55
Sgcb-201ENSMUST00000081170 Herc1E9PZP8 4859 aa5.29□□□□□ -1.56
Sgcb-201ENSMUST00000081170 Tnp1P10856 55 aa5.29□□□□□ -1.56
Sgcb-201ENSMUST00000081170 Gm17416Q30KP4 66 aa5.26□□□□□ -1.57
Sgcb-201ENSMUST00000081170 Lrp2A2ARV4 4660 aa5.22□□□□□ -1.57
Sgcb-201ENSMUST00000081170 Prm1P02319 51 aa5.19□□□□□ -1.58
Sgcb-201ENSMUST00000081170 Gm18596A0A1W2P860 280 aa5.19□□□□□ -1.58
Sgcb-201ENSMUST00000081170 Gm9789Q8BIG3 52 aa5.16□□□□□ -1.58
Sgcb-201ENSMUST00000081170 Hmcn2A2AJ76 5100 aa5.15□□□□□ -1.59
Sgcb-201ENSMUST00000081170 Gm7735D3YX18 52 aa5.13□□□□□ -1.59
Sgcb-201ENSMUST00000081170 Ush2AQ2QI47 5193 aa5.13□□□□□ -1.59
Sgcb-201ENSMUST00000081170 Gm17402F6Z0L5 76 aa5.07□□□□□ -1.6
Sgcb-201ENSMUST00000081170 Sprr2a3Q4KL71 83 aa5.01□□□□□ -1.61
Sgcb-201ENSMUST00000081170 Sprr2a1Q9CQK8 83 aa5.01□□□□□ -1.61
Sgcb-201ENSMUST00000081170 4932415D10RikA0A1W2P6U8 4986 aa4.95□□□□□ -1.62
Sgcb-201ENSMUST00000081170 Ubr4A2AN08 5180 aa4.93□□□□□ -1.62
Sgcb-201ENSMUST00000081170 A0A1Y7VJH8 109 aa4.92□□□□□ -1.62
Sgcb-201ENSMUST00000081170 Rnf213E9Q555 5152 aaKnown RBP4.83□□□□□ -1.64
Sgcb-201ENSMUST00000081170 ZanO88799 5376 aa4.79□□□□□ -1.64
Sgcb-201ENSMUST00000081170 Krtap1-3A2A588 173 aa4.79□□□□□ -1.64
Sgcb-201ENSMUST00000081170 Krtap1-5A2A590 122 aa4.76□□□□□ -1.65
Sgcb-201ENSMUST00000081170 Fat4Q2PZL6 4981 aa4.73□□□□□ -1.65
Sgcb-201ENSMUST00000081170 Krtap28-10A0A1Y7VP58 119 aa4.72□□□□□ -1.65
Sgcb-201ENSMUST00000081170 Syne1Q6ZWR6 8799 aa4.65□□□□□ -1.66
Sgcb-201ENSMUST00000081170 SspoQ8CG65 4998 aa4.63□□□□□ -1.67
Sgcb-201ENSMUST00000081170 Krtap1-4Q3V2D6 188 aa4.61□□□□□ -1.67
Sgcb-201ENSMUST00000081170 Krtap17-1A2A5X6 109 aa4.61□□□□□ -1.67
Sgcb-201ENSMUST00000081170 Krtap19-1Q925H2 87 aa4.6□□□□□ -1.67
Sgcb-201ENSMUST00000081170 Krtap4-1Q3UUY3 169 aa4.59□□□□□ -1.67
Sgcb-201ENSMUST00000081170 Krtap16-3Q8C1I6 86 aa4.59□□□□□ -1.68
Sgcb-201ENSMUST00000081170 Krtap19-3Q925H6 87 aa4.57□□□□□ -1.68
Sgcb-201ENSMUST00000081170 Gm7544A0A1Y7VJ58 118 aa4.54□□□□□ -1.68
Sgcb-201ENSMUST00000081170 Krtap12-1Q9Z287 130 aa4.52□□□□□ -1.69
Sgcb-201ENSMUST00000081170 A030005L19RikA0A1Y7VIU2 113 aa4.5□□□□□ -1.69
Sgcb-201ENSMUST00000081170 4933428G20RikQ9D3X4 101 aa4.49□□□□□ -1.69
Sgcb-201ENSMUST00000081170 Gm11562A0PK51 136 aa4.48□□□□□ -1.69
Sgcb-201ENSMUST00000081170 Muc16A0A140LJ72 8478 aa4.48□□□□□ -1.69
Sgcb-201ENSMUST00000081170 A0A1Y7VLE6 161 aa4.48□□□□□ -1.69
Sgcb-201ENSMUST00000081170 Gm10061D3Z714 54 aa4.47□□□□□ -1.69
Sgcb-201ENSMUST00000081170 Lce1jD3YUU5 139 aa4.45□□□□□ -1.7
Sgcb-201ENSMUST00000081170 Krtap31-1Q9D644 177 aa4.42□□□□□ -1.7
Sgcb-201ENSMUST00000081170 Muc5bE9Q5I3 4800 aa4.42□□□□□ -1.7
Sgcb-201ENSMUST00000081170 Krtap9-3Q3V2C1 136 aa4.42□□□□□ -1.7
Sgcb-201ENSMUST00000081170 LorP18165 486 aa4.4□□□□□ -1.7
Sgcb-201ENSMUST00000081170 2310046K23RikA0A0A6YVW6 87 aa4.38□□□□□ -1.71
Sgcb-201ENSMUST00000081170 Krtap19-9aF8WH65 55 aa4.37□□□□□ -1.71
Sgcb-201ENSMUST00000081170 A030005K14RikA0A1Y7VNY1 122 aa4.36□□□□□ -1.71
Sgcb-201ENSMUST00000081170 Krtap19-9bQ99NG9 58 aa4.34□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Krtap28-13A0A087WQP5 138 aa4.33□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Lce1dQ9D731 133 aa4.33□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Gm6358A0A087WPH4 74 aa4.32□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Gm11569B1AQB1 180 aa4.3□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Gm11563B1AQ90 168 aa4.29□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Krtap4-7Q9D732 168 aa4.29□□□□□ -1.72
Sgcb-201ENSMUST00000081170 Gm11555B1AQ89 175 aa4.27□□□□□ -1.73
Sgcb-201ENSMUST00000081170 Lce1hQ9D6R3 140 aa4.26□□□□□ -1.73
Sgcb-201ENSMUST00000081170 Krtap8-1O08633 61 aa4.24□□□□□ -1.73
Sgcb-201ENSMUST00000081170 Gm10100J3QK64 120 aa4.15□□□□□ -1.74
Sgcb-201ENSMUST00000081170 Krtap4-2B1AQ85 167 aa4.13□□□□□ -1.75
Sgcb-201ENSMUST00000081170 Lce1gQ9D195 139 aa4.13□□□□□ -1.75
Sgcb-201ENSMUST00000081170 Gm10272F7CZ33 110 aa4.1□□□□□ -1.75
Sgcb-201ENSMUST00000081170 Lce1eQ9D139 143 aa4.09□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Lce1a2Q9D1K4 149 aa4.08□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Mdn1A2ANY6 5589 aaKnown RBP4.08□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Lce1iQ9D6P5 149 aa4.07□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Krtap19-2Q925I0 141 aa4.07□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Krtap9-5A2A5X3 358 aa4.04□□□□□ -1.76
Sgcb-201ENSMUST00000081170 Syne2Q6ZWQ0 6874 aaKnown RBP4.02□□□□□ -1.77
Sgcb-201ENSMUST00000081170 Gm10142J3KMP7 120 aa4□□□□□ -1.77
Sgcb-201ENSMUST00000081170 Gm11938Q9D3H4 131 aa3.99□□□□□ -1.77
Sgcb-201ENSMUST00000081170 Lce3bQ9CQM7 98 aa3.98□□□□□ -1.77
Sgcb-201ENSMUST00000081170 Gm11596B1AQB0 205 aa3.98□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 99.3 ms