RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Gm35339A0A140LHH9 1649 aa21.17■□□□□ 0.98
Sgcb-201ENSMUST00000081170 NischQ80TM9 1593 aa20.19■□□□□ 0.82
Sgcb-201ENSMUST00000081170 Ehmt2Q9Z148 1263 aaKnown RBP19.88■□□□□ 0.77
Sgcb-201ENSMUST00000081170 Abcc9P70170 1546 aa19.78■□□□□ 0.76
Sgcb-201ENSMUST00000081170 Abcc8B2RUS7 1588 aa19.71■□□□□ 0.74
Sgcb-201ENSMUST00000081170 Rpgrip1Q9EPQ2 1331 aa19.56■□□□□ 0.72
Sgcb-201ENSMUST00000081170 Rhox8Q6VSS7 320 aa19.31■□□□□ 0.68
Sgcb-201ENSMUST00000081170 Pcgf6Q99NA9 353 aa19.26■□□□□ 0.67
Sgcb-201ENSMUST00000081170 ScribQ80U72 1612 aa19.13■□□□□ 0.65
Sgcb-201ENSMUST00000081170 Acin1Q9JIX8 1338 aaKnown RBP18.94■□□□□ 0.62
Sgcb-201ENSMUST00000081170 Las1lA2BE28 776 aaKnown RBP18.78■□□□□ 0.6
Sgcb-201ENSMUST00000081170 Supt5hO55201 1082 aaKnown RBP18.76■□□□□ 0.59
Sgcb-201ENSMUST00000081170 Neurod1Q60867 357 aa18.7■□□□□ 0.58
Sgcb-201ENSMUST00000081170 Zeb1Q64318 1117 aa18.67■□□□□ 0.58
Sgcb-201ENSMUST00000081170 DiexfQ8BTT6 772 aaKnown RBP18.56■□□□□ 0.56
Sgcb-201ENSMUST00000081170 CenpbP27790 599 aa18.49■□□□□ 0.55
Sgcb-201ENSMUST00000081170 Gm38655A0A286YDK6 273 aa18.44■□□□□ 0.54
Sgcb-201ENSMUST00000081170 Dcaf1Q80TR8 1506 aa18.38■□□□□ 0.53
Sgcb-201ENSMUST00000081170 Csrnp3P59055 597 aa18.33■□□□□ 0.52
Sgcb-201ENSMUST00000081170 1700123L14RikQ3V2K7 440 aa18.31■□□□□ 0.52
Sgcb-201ENSMUST00000081170 Kdm5dQ62240 1548 aa18.28■□□□□ 0.52
Sgcb-201ENSMUST00000081170 NacadQ5SWP3 1504 aa18.27■□□□□ 0.52
Sgcb-201ENSMUST00000081170 Cngb1E1AZ71 1325 aa18.19■□□□□ 0.5
Sgcb-201ENSMUST00000081170 Ppargc1bQ8VHJ7 1014 aa18.14■□□□□ 0.5
Sgcb-201ENSMUST00000081170 Wdr66E9Q743 1299 aa18.12■□□□□ 0.49
Sgcb-201ENSMUST00000081170 Ccdc180J3QNE4 1664 aa18.04■□□□□ 0.48
Sgcb-201ENSMUST00000081170 Bcl11aQ9QYE3 773 aa18■□□□□ 0.47
Sgcb-201ENSMUST00000081170 Sycp2Q9CUU3 1500 aa17.98■□□□□ 0.47
Sgcb-201ENSMUST00000081170 Myt1Q8CFC2 1127 aa17.9■□□□□ 0.46
Sgcb-201ENSMUST00000081170 Amer1Q7TS75 1132 aa17.87■□□□□ 0.45
Sgcb-201ENSMUST00000081170 Ttbk1Q6PCN3 1308 aa17.86■□□□□ 0.45
Sgcb-201ENSMUST00000081170 BicraF8VPZ9 1578 aa17.86■□□□□ 0.45
Sgcb-201ENSMUST00000081170 PrkcshO08795 521 aa17.79■□□□□ 0.44
Sgcb-201ENSMUST00000081170 Sall2Q9QX96 1004 aa17.79■□□□□ 0.44
Sgcb-201ENSMUST00000081170 Cdk11bP24788 784 aaKnown RBP17.67■□□□□ 0.42
Sgcb-201ENSMUST00000081170 Anks4bQ8K3X6 423 aa17.66■□□□□ 0.42
Sgcb-201ENSMUST00000081170 Trim41Q5NCC3 630 aa17.65■□□□□ 0.42
Sgcb-201ENSMUST00000081170 Mapk8ip2Q9ERE9 830 aa17.65■□□□□ 0.42
Sgcb-201ENSMUST00000081170 Ccdc136Q3TVA9 1136 aa17.64■□□□□ 0.42
Sgcb-201ENSMUST00000081170 Crybg2B7ZCC2 1516 aa17.61■□□□□ 0.41
Sgcb-201ENSMUST00000081170 Rb1cc1Q9ESK9 1588 aa17.6■□□□□ 0.41
Sgcb-201ENSMUST00000081170 Nop58Q6DFW4 536 aaKnown RBP17.6■□□□□ 0.41
Sgcb-201ENSMUST00000081170 Ifnlr1Q8CGK5 535 aa17.58■□□□□ 0.41
Sgcb-201ENSMUST00000081170 Aplp2Q06335 707 aa17.51■□□□□ 0.39
Sgcb-201ENSMUST00000081170 Fam71e1A1L3C1 212 aa17.5■□□□□ 0.39
Sgcb-201ENSMUST00000081170 Gab3Q8BSM5 595 aa17.47■□□□□ 0.39
Sgcb-201ENSMUST00000081170 Baz1aO88379 1555 aa17.45■□□□□ 0.38
Sgcb-201ENSMUST00000081170 SafbD3YXK2 937 aaKnown RBP17.32■□□□□ 0.36
Sgcb-201ENSMUST00000081170 NefmP08553 848 aa17.29■□□□□ 0.36
Sgcb-201ENSMUST00000081170 Thoc2B1AZI6 1594 aaKnown RBP17.26■□□□□ 0.35
Sgcb-201ENSMUST00000081170 Mier1Q5UAK0 511 aa17.24■□□□□ 0.35
Sgcb-201ENSMUST00000081170 Aebp2Q9Z248 504 aaKnown RBP17.18■□□□□ 0.34
Sgcb-201ENSMUST00000081170 Ap3b1Q9Z1T1 1105 aa17.15■□□□□ 0.34
Sgcb-201ENSMUST00000081170 UbtfP25976 765 aaKnown RBP17.14■□□□□ 0.33
Sgcb-201ENSMUST00000081170 Slc24a1Q91WD8 1130 aa17.08■□□□□ 0.32
Sgcb-201ENSMUST00000081170 Pelp1Q9DBD5 1123 aaKnown RBP17.08■□□□□ 0.32
Sgcb-201ENSMUST00000081170 HrcG5E8J6 738 aa17.06■□□□□ 0.32
Sgcb-201ENSMUST00000081170 Smarca2Q6DIC0 1577 aa17.06■□□□□ 0.32
Sgcb-201ENSMUST00000081170 Hnrnpul2Q00PI9 745 aaKnown RBP17■□□□□ 0.31
Sgcb-201ENSMUST00000081170 Pds5bQ4VA53 1446 aaKnown RBP16.99■□□□□ 0.31
Sgcb-201ENSMUST00000081170 Atad2bE9Q166 1460 aaKnown RBP16.92■□□□□ 0.3
Sgcb-201ENSMUST00000081170 Smarca4Q3TKT4 1613 aaKnown RBP16.9■□□□□ 0.3
Sgcb-201ENSMUST00000081170 ClspnQ80YR7 1315 aa16.88■□□□□ 0.29
Sgcb-201ENSMUST00000081170 Rtl1Q7M732 1744 aa16.87■□□□□ 0.29
Sgcb-201ENSMUST00000081170 Anp32aO35381 247 aa16.83■□□□□ 0.28
Sgcb-201ENSMUST00000081170 4933416C03RikQ3V063 378 aa16.82■□□□□ 0.28
Sgcb-201ENSMUST00000081170 Fam135aQ6NS59 1506 aa16.8■□□□□ 0.28
Sgcb-201ENSMUST00000081170 Hdac5Q9Z2V6 1113 aa16.8■□□□□ 0.28
Sgcb-201ENSMUST00000081170 Baz1bQ9Z277 1479 aa16.78■□□□□ 0.28
Sgcb-201ENSMUST00000081170 Iqgap2Q3UQ44 1575 aa16.76■□□□□ 0.27
Sgcb-201ENSMUST00000081170 Eif5bQ05D44 1216 aaKnown RBP16.76■□□□□ 0.27
Sgcb-201ENSMUST00000081170 Unc13aQ4KUS2 1712 aa16.76■□□□□ 0.27
Sgcb-201ENSMUST00000081170 Tnnt3Q9QZ47 272 aa16.74■□□□□ 0.27
Sgcb-201ENSMUST00000081170 Wdr62Q3U3T8 1523 aa16.71■□□□□ 0.27
Sgcb-201ENSMUST00000081170 Cecr2E9Q2Z1 1453 aa16.69■□□□□ 0.26
Sgcb-201ENSMUST00000081170 Dnajc5bQ9CQ94 199 aa16.68■□□□□ 0.26
Sgcb-201ENSMUST00000081170 Cc2d2aQ8CFW7 1633 aa16.67■□□□□ 0.26
Sgcb-201ENSMUST00000081170 Pknox2Q8BG99 474 aa16.65■□□□□ 0.26
Sgcb-201ENSMUST00000081170 Il27Q8K3I6 234 aa16.65■□□□□ 0.26
Sgcb-201ENSMUST00000081170 Plcd4Q8K3R3 807 aa16.62■□□□□ 0.25
Sgcb-201ENSMUST00000081170 TonslQ6NZL6 1363 aa16.62■□□□□ 0.25
Sgcb-201ENSMUST00000081170 Zcchc6Q5BLK4 1491 aaKnown RBP16.61■□□□□ 0.25
Sgcb-201ENSMUST00000081170 Myt1lP97500 1187 aa16.59■□□□□ 0.25
Sgcb-201ENSMUST00000081170 Ppp4r2Q0VGB7 417 aa16.58■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Frmpd1A2AKB4 1549 aa16.56■□□□□ 0.24
Sgcb-201ENSMUST00000081170 DaxxO35613 739 aa16.56■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Nolc1E9Q5C9 702 aaKnown RBP16.55■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Rtl5Q5DTT4 599 aa16.55■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Cttnbp2B9EJA2 1648 aa16.53■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Eid3Q3V124 375 aa16.52■□□□□ 0.24
Sgcb-201ENSMUST00000081170 Taok2Q6ZQ29 1240 aa16.5■□□□□ 0.23
Sgcb-201ENSMUST00000081170 Calr4Q3TQS0 420 aa16.5■□□□□ 0.23
Sgcb-201ENSMUST00000081170 Ercc6F8VPZ5 1481 aa16.49■□□□□ 0.23
Sgcb-201ENSMUST00000081170 Gtf3c3Q3TMP1 882 aa16.45■□□□□ 0.22
Sgcb-201ENSMUST00000081170 Zbtb4Q5F293 982 aa16.43■□□□□ 0.22
Sgcb-201ENSMUST00000081170 Stra8P70278 393 aa16.42■□□□□ 0.22
Sgcb-201ENSMUST00000081170 Supt16hQ920B9 1047 aa16.4■□□□□ 0.22
Sgcb-201ENSMUST00000081170 Zbtb7cQ8VCZ7 619 aa16.39■□□□□ 0.21
Sgcb-201ENSMUST00000081170 Synj1Q8CHC4 1574 aa16.38■□□□□ 0.21
Sgcb-201ENSMUST00000081170 CftrP26361 1476 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 116.6 ms