RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Dnah5Q8VHE6 4621 aa3.54□□□□□ -1.84
Spen-201ENSMUST00000078886 Gm19402J3QJV4 266 aa3.54□□□□□ -1.84
Spen-201ENSMUST00000078886 Dnah2P0C6F1 4456 aa3.54□□□□□ -1.84
Spen-201ENSMUST00000078886 ApobE9Q414 4505 aa3.51□□□□□ -1.85
Spen-201ENSMUST00000078886 Dnah8Q91XQ0 4731 aa3.51□□□□□ -1.85
Spen-201ENSMUST00000078886 Svep1A2AVA0 3567 aa3.5□□□□□ -1.85
Spen-201ENSMUST00000078886 Pkhd1E9PZ36 4059 aa3.5□□□□□ -1.85
Spen-201ENSMUST00000078886 Hectd4E9Q2E4 4418 aa3.49□□□□□ -1.85
Spen-201ENSMUST00000078886 Dnah11E9Q7N9 4488 aa3.47□□□□□ -1.85
Spen-201ENSMUST00000078886 Sprr2a3Q4KL71 83 aa3.47□□□□□ -1.85
Spen-201ENSMUST00000078886 Sprr2a1Q9CQK8 83 aa3.47□□□□□ -1.85
Spen-201ENSMUST00000078886 SacsQ9JLC8 4582 aa3.45□□□□□ -1.86
Spen-201ENSMUST00000078886 Dync2h1Q45VK7 4306 aa3.44□□□□□ -1.86
Spen-201ENSMUST00000078886 Fat1A0A1L1SQU7 4645 aa3.44□□□□□ -1.86
Spen-201ENSMUST00000078886 Krtap1-5A2A590 122 aa3.42□□□□□ -1.86
Spen-201ENSMUST00000078886 CubnQ9JLB4 3623 aa3.39□□□□□ -1.87
Spen-201ENSMUST00000078886 Krtap19-9aF8WH65 55 aa3.39□□□□□ -1.87
Spen-201ENSMUST00000078886 Dnah9B1AR51 4484 aa3.38□□□□□ -1.87
Spen-201ENSMUST00000078886 Dync1h1Q9JHU4 4644 aaKnown RBP3.38□□□□□ -1.87
Spen-201ENSMUST00000078886 Stard9Q80TF6 4561 aa3.36□□□□□ -1.87
Spen-201ENSMUST00000078886 Krtap8-1O08633 61 aa3.35□□□□□ -1.87
Spen-201ENSMUST00000078886 Krtap19-9bQ99NG9 58 aa3.35□□□□□ -1.87
Spen-201ENSMUST00000078886 Mycbp2Q7TPH6 4711 aa3.34□□□□□ -1.87
Spen-201ENSMUST00000078886 Lrp1Q91ZX7 4545 aaKnown RBP3.32□□□□□ -1.88
Spen-201ENSMUST00000078886 Sprr2kO70562 68 aa3.31□□□□□ -1.88
Spen-201ENSMUST00000078886 Krtap1-4Q3V2D6 188 aa3.31□□□□□ -1.88
Spen-201ENSMUST00000078886 Krtap12-1Q9Z287 130 aa3.3□□□□□ -1.88
Spen-201ENSMUST00000078886 Lrp1bQ9JI18 4599 aa3.24□□□□□ -1.89
Spen-201ENSMUST00000078886 Pkhd1l1Q80ZA4 4249 aa3.22□□□□□ -1.89
Spen-201ENSMUST00000078886 Fat3Q8BNA6 4555 aa3.22□□□□□ -1.89
Spen-201ENSMUST00000078886 Ryr1E9PZQ0 5035 aa3.21□□□□□ -1.9
Spen-201ENSMUST00000078886 Gm10100J3QK64 120 aa3.17□□□□□ -1.9
Spen-201ENSMUST00000078886 Pkd1O08852 4293 aa3.16□□□□□ -1.9
Spen-201ENSMUST00000078886 LorP18165 486 aa3.15□□□□□ -1.91
Spen-201ENSMUST00000078886 Sprr2gO70558 76 aa3.13□□□□□ -1.91
Spen-201ENSMUST00000078886 Gm10272F7CZ33 110 aa3.12□□□□□ -1.91
Spen-201ENSMUST00000078886 Lce3bQ9CQM7 98 aa3.1□□□□□ -1.91
Spen-201ENSMUST00000078886 Gm10142J3KMP7 120 aa3.1□□□□□ -1.91
Spen-201ENSMUST00000078886 Lce3cQ91V05 98 aa3.1□□□□□ -1.91
Spen-201ENSMUST00000078886 Dnhd1D3Z2X2 4750 aa3.08□□□□□ -1.92
Spen-201ENSMUST00000078886 Fat2Q5F226 4351 aa3.03□□□□□ -1.92
Spen-201ENSMUST00000078886 Lce3eF8VQJ0 98 aa3.01□□□□□ -1.93
Spen-201ENSMUST00000078886 Lce3fQ6PAI4 98 aa3.01□□□□□ -1.93
Spen-201ENSMUST00000078886 2310046K23RikA0A0A6YVW6 87 aa3□□□□□ -1.93
Spen-201ENSMUST00000078886 Lce3dE9Q8V1 98 aa2.97□□□□□ -1.93
Spen-201ENSMUST00000078886 Lce3aQ497I5 98 aa2.97□□□□□ -1.93
Spen-201ENSMUST00000078886 Ryr3A2AGL3 4863 aa2.94□□□□□ -1.94
Spen-201ENSMUST00000078886 Gm10024A0A0A0MQA4 119 aa2.92□□□□□ -1.94
Spen-201ENSMUST00000078886 Ryr2E9Q401 4966 aaKnown RBP2.92□□□□□ -1.94
Spen-201ENSMUST00000078886 Krtap9-5A2A5X3 358 aa2.91□□□□□ -1.94
Spen-201ENSMUST00000078886 Krtap16-3Q8C1I6 86 aa2.87□□□□□ -1.95
Spen-201ENSMUST00000078886 Krtap19-3Q925H6 87 aa2.86□□□□□ -1.95
Spen-201ENSMUST00000078886 Kmt2cQ8BRH4 4903 aa2.85□□□□□ -1.95
Spen-201ENSMUST00000078886 PcloQ9QYX7 5068 aa2.85□□□□□ -1.95
Spen-201ENSMUST00000078886 Lce1jD3YUU5 139 aa2.84□□□□□ -1.95
Spen-201ENSMUST00000078886 Lce1gQ9D195 139 aa2.84□□□□□ -1.95
Spen-201ENSMUST00000078886 Lce1iQ9D6P5 149 aa2.84□□□□□ -1.95
Spen-201ENSMUST00000078886 Lce1hQ9D6R3 140 aa2.84□□□□□ -1.95
Spen-201ENSMUST00000078886 Lce1mQ9CR91 182 aa2.83□□□□□ -1.96
Spen-201ENSMUST00000078886 Herc2Q4U2R1 4836 aa2.83□□□□□ -1.96
Spen-201ENSMUST00000078886 Sprr2eO70556 76 aa2.81□□□□□ -1.96
Spen-201ENSMUST00000078886 Mt2P02798 61 aa2.81□□□□□ -1.96
Spen-201ENSMUST00000078886 Krtap19-1Q925H2 87 aa2.8□□□□□ -1.96
Spen-201ENSMUST00000078886 Krtap22-2J3QNX6 67 aa2.79□□□□□ -1.96
Spen-201ENSMUST00000078886 Sprr2iO70560 76 aa2.76□□□□□ -1.97
Spen-201ENSMUST00000078886 Sprr2fO70557 76 aa2.75□□□□□ -1.97
Spen-201ENSMUST00000078886 Lrp2A2ARV4 4660 aa2.74□□□□□ -1.97
Spen-201ENSMUST00000078886 Krtap31-1Q9D644 177 aa2.72□□□□□ -1.97
Spen-201ENSMUST00000078886 Krtap9-3Q3V2C1 136 aa2.71□□□□□ -1.97
Spen-201ENSMUST00000078886 Gm38119A0A0A6YX29 146 aa2.71□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1fB9EJP6 147 aa2.7□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1cQ9D1C5 147 aa2.7□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1lQ9D1G7 135 aa2.7□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1dQ9D731 133 aa2.7□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1eQ9D139 143 aa2.69□□□□□ -1.98
Spen-201ENSMUST00000078886 ZanO88799 5376 aa2.68□□□□□ -1.98
Spen-201ENSMUST00000078886 Krtap19-2Q925I0 141 aa2.68□□□□□ -1.98
Spen-201ENSMUST00000078886 Birc6O88738 4882 aa2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 HydinQ80W93 5154 aa2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 Mdn1A2ANY6 5589 aaKnown RBP2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 Krtap19-4Q925H7 84 aa2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 Krtap31-2Q8CAY5 177 aa2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 Herc1E9PZP8 4859 aa2.66□□□□□ -1.98
Spen-201ENSMUST00000078886 Lce1bQ9D149 137 aa2.65□□□□□ -1.99
Spen-201ENSMUST00000078886 Kiaa1109A2AAE1 5005 aa2.65□□□□□ -1.99
Spen-201ENSMUST00000078886 Prm1P02319 51 aa2.63□□□□□ -1.99
Spen-201ENSMUST00000078886 Syne1Q6ZWR6 8799 aa2.61□□□□□ -1.99
Spen-201ENSMUST00000078886 Ubr4A2AN08 5180 aa2.61□□□□□ -1.99
Spen-201ENSMUST00000078886 Sprr2dO70555 85 aa2.6□□□□□ -1.99
Spen-201ENSMUST00000078886 Krtap1-3A2A588 173 aa2.54□□□□□ -2
Spen-201ENSMUST00000078886 Gm7735D3YX18 52 aa2.49□□□□□ -2.01
Spen-201ENSMUST00000078886 Sprr2hO70559 108 aa2.48□□□□□ -2.01
Spen-201ENSMUST00000078886 Abca13Q5SSE9 5034 aa2.44□□□□□ -2.02
Spen-201ENSMUST00000078886 Fsip2A2ARZ3 6995 aa2.43□□□□□ -2.02
Spen-201ENSMUST00000078886 4932415D10RikA0A1W2P6U8 4986 aa2.43□□□□□ -2.02
Spen-201ENSMUST00000078886 Gm9789Q8BIG3 52 aa2.43□□□□□ -2.02
Spen-201ENSMUST00000078886 Gm10061D3Z714 54 aa2.42□□□□□ -2.02
Spen-201ENSMUST00000078886 Muc5bE9Q5I3 4800 aa2.42□□□□□ -2.02
Spen-201ENSMUST00000078886 Krtap4-16Q91W93 202 aa2.41□□□□□ -2.02
Spen-201ENSMUST00000078886 Syne2Q6ZWQ0 6874 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms