RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Gm11939A2A592 99 aa5.07□□□□□ -1.6
Cpsf1-201ENSMUST00000071898 ApobE9Q414 4505 aa5.06□□□□□ -1.6
Cpsf1-201ENSMUST00000071898 Dync1h1Q9JHU4 4644 aaKnown RBP5.03□□□□□ -1.6
Cpsf1-201ENSMUST00000071898 Gm17416Q30KP4 66 aa5.02□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Krtap3-2Q9D638 99 aa5.01□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Krtap3-3Q9D7P0 99 aa5.01□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Gm18596A0A1W2P860 280 aa5.01□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Fat1A0A1L1SQU7 4645 aa4.99□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Mycbp2Q7TPH6 4711 aa4.97□□□□□ -1.61
Cpsf1-201ENSMUST00000071898 Abca13Q5SSE9 5034 aa4.94□□□□□ -1.62
Cpsf1-201ENSMUST00000071898 B930094E09RikQ8C4T2 136 aa4.93□□□□□ -1.62
Cpsf1-201ENSMUST00000071898 2210017I01RikA0A0A6YVV1 95 aa4.93□□□□□ -1.62
Cpsf1-201ENSMUST00000071898 Kmt2cQ8BRH4 4903 aa4.91□□□□□ -1.62
Cpsf1-201ENSMUST00000071898 Lce1mQ9CR91 182 aa4.91□□□□□ -1.62
Cpsf1-201ENSMUST00000071898 Ryr2E9Q401 4966 aaKnown RBP4.9□□□□□ -1.63
Cpsf1-201ENSMUST00000071898 Fat3Q8BNA6 4555 aa4.9□□□□□ -1.63
Cpsf1-201ENSMUST00000071898 Crct1Q6PAI5 102 aa4.86□□□□□ -1.63
Cpsf1-201ENSMUST00000071898 Herc2Q4U2R1 4836 aa4.85□□□□□ -1.63
Cpsf1-201ENSMUST00000071898 Tnp1P10856 55 aa4.84□□□□□ -1.64
Cpsf1-201ENSMUST00000071898 Kiaa1109A2AAE1 5005 aa4.83□□□□□ -1.64
Cpsf1-201ENSMUST00000071898 Gm10318A0A1W2P728 225 aa4.8□□□□□ -1.64
Cpsf1-201ENSMUST00000071898 SacsQ9JLC8 4582 aa4.8□□□□□ -1.64
Cpsf1-201ENSMUST00000071898 Dnah8Q91XQ0 4731 aa4.78□□□□□ -1.64
Cpsf1-201ENSMUST00000071898 HydinQ80W93 5154 aa4.75□□□□□ -1.65
Cpsf1-201ENSMUST00000071898 Krtap3-1A2A591 98 aa4.74□□□□□ -1.65
Cpsf1-201ENSMUST00000071898 PcloQ9QYX7 5068 aa4.74□□□□□ -1.65
Cpsf1-201ENSMUST00000071898 Gm17402F6Z0L5 76 aa4.73□□□□□ -1.65
Cpsf1-201ENSMUST00000071898 Krtap13-1Q8K198 168 aa4.73□□□□□ -1.65
Cpsf1-201ENSMUST00000071898 Lrp2A2ARV4 4660 aa4.66□□□□□ -1.66
Cpsf1-201ENSMUST00000071898 Prm1P02319 51 aa4.62□□□□□ -1.67
Cpsf1-201ENSMUST00000071898 Birc6O88738 4882 aa4.61□□□□□ -1.67
Cpsf1-201ENSMUST00000071898 LorP18165 486 aa4.59□□□□□ -1.67
Cpsf1-201ENSMUST00000071898 Dnhd1D3Z2X2 4750 aa4.54□□□□□ -1.68
Cpsf1-201ENSMUST00000071898 Gm7735D3YX18 52 aa4.53□□□□□ -1.68
Cpsf1-201ENSMUST00000071898 Gm19402J3QJV4 266 aa4.5□□□□□ -1.69
Cpsf1-201ENSMUST00000071898 Krtap7-1Q9D3I6 87 aa4.5□□□□□ -1.69
Cpsf1-201ENSMUST00000071898 Ubr4A2AN08 5180 aa4.48□□□□□ -1.69
Cpsf1-201ENSMUST00000071898 Gm19668J3QMD1 248 aa4.48□□□□□ -1.69
Cpsf1-201ENSMUST00000071898 Krtap1-5A2A590 122 aa4.44□□□□□ -1.7
Cpsf1-201ENSMUST00000071898 Gm9789Q8BIG3 52 aa4.43□□□□□ -1.7
Cpsf1-201ENSMUST00000071898 Sprr2a3Q4KL71 83 aa4.36□□□□□ -1.71
Cpsf1-201ENSMUST00000071898 Sprr2a1Q9CQK8 83 aa4.36□□□□□ -1.71
Cpsf1-201ENSMUST00000071898 Herc1E9PZP8 4859 aa4.35□□□□□ -1.71
Cpsf1-201ENSMUST00000071898 4933428G20RikQ9D3X4 101 aa4.34□□□□□ -1.71
Cpsf1-201ENSMUST00000071898 Krtap19-3Q925H6 87 aa4.33□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 Fat4Q2PZL6 4981 aa4.32□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 Krtap16-3Q8C1I6 86 aa4.32□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 4932415D10RikA0A1W2P6U8 4986 aa4.28□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 Krtap1-4Q3V2D6 188 aa4.28□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 Krtap19-1Q925H2 87 aa4.28□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 Krtap1-3A2A588 173 aa4.28□□□□□ -1.72
Cpsf1-201ENSMUST00000071898 ZanO88799 5376 aa4.27□□□□□ -1.73
Cpsf1-201ENSMUST00000071898 Krtap19-9aF8WH65 55 aa4.25□□□□□ -1.73
Cpsf1-201ENSMUST00000071898 Krtap12-1Q9Z287 130 aa4.22□□□□□ -1.73
Cpsf1-201ENSMUST00000071898 Ush2AQ2QI47 5193 aa4.12□□□□□ -1.75
Cpsf1-201ENSMUST00000071898 Krtap9-5A2A5X3 358 aa4.1□□□□□ -1.75
Cpsf1-201ENSMUST00000071898 Gm10061D3Z714 54 aa4.1□□□□□ -1.75
Cpsf1-201ENSMUST00000071898 Krtap8-1O08633 61 aa4.1□□□□□ -1.75
Cpsf1-201ENSMUST00000071898 Rnf213E9Q555 5152 aaKnown RBP4.08□□□□□ -1.76
Cpsf1-201ENSMUST00000071898 Hmcn2A2AJ76 5100 aa4.06□□□□□ -1.76
Cpsf1-201ENSMUST00000071898 Gm11569B1AQB1 180 aa4.02□□□□□ -1.77
Cpsf1-201ENSMUST00000071898 Sprr2kO70562 68 aa4.01□□□□□ -1.77
Cpsf1-201ENSMUST00000071898 Krtap19-9bQ99NG9 58 aa4.01□□□□□ -1.77
Cpsf1-201ENSMUST00000071898 Krtap19-2Q925I0 141 aa3.97□□□□□ -1.77
Cpsf1-201ENSMUST00000071898 Mdn1A2ANY6 5589 aaKnown RBP3.93□□□□□ -1.78
Cpsf1-201ENSMUST00000071898 Krtap4-2B1AQ85 167 aa3.91□□□□□ -1.78
Cpsf1-201ENSMUST00000071898 Krtap17-1A2A5X6 109 aa3.87□□□□□ -1.79
Cpsf1-201ENSMUST00000071898 Lce1jD3YUU5 139 aa3.87□□□□□ -1.79
Cpsf1-201ENSMUST00000071898 Lce1gQ9D195 139 aa3.83□□□□□ -1.8
Cpsf1-201ENSMUST00000071898 Gm6358A0A087WPH4 74 aa3.83□□□□□ -1.8
Cpsf1-201ENSMUST00000071898 Mt2P02798 61 aa3.82□□□□□ -1.8
Cpsf1-201ENSMUST00000071898 Sprr2gO70558 76 aa3.78□□□□□ -1.81
Cpsf1-201ENSMUST00000071898 Krtap4-6Q3V4B7 195 aa3.75□□□□□ -1.81
Cpsf1-201ENSMUST00000071898 Krtap22-2J3QNX6 67 aa3.74□□□□□ -1.81
Cpsf1-201ENSMUST00000071898 SspoQ8CG65 4998 aa3.68□□□□□ -1.82
Cpsf1-201ENSMUST00000071898 2310046K23RikA0A0A6YVW6 87 aa3.68□□□□□ -1.82
Cpsf1-201ENSMUST00000071898 Gm11596B1AQB0 205 aa3.68□□□□□ -1.82
Cpsf1-201ENSMUST00000071898 Muc5bE9Q5I3 4800 aa3.68□□□□□ -1.82
Cpsf1-201ENSMUST00000071898 Gm38119A0A0A6YX29 146 aa3.67□□□□□ -1.82
Cpsf1-201ENSMUST00000071898 Gm11562A0PK51 136 aa3.64□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Krtap4-1Q3UUY3 169 aa3.64□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Krtap9-3Q3V2C1 136 aa3.62□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Syne2Q6ZWQ0 6874 aaKnown RBP3.59□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Mt4P47945 62 aa3.59□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Lce1iQ9D6P5 149 aa3.59□□□□□ -1.83
Cpsf1-201ENSMUST00000071898 Krtap31-1Q9D644 177 aa3.58□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Gm11564A2A4L9 201 aa3.56□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Gm11563B1AQ90 168 aa3.56□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Gm11595B1AQA7 289 aa3.56□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Krtap4-8B1AQA8 209 aa3.56□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Gm10272F7CZ33 110 aa3.54□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Lce1a2Q9D1K4 149 aa3.54□□□□□ -1.84
Cpsf1-201ENSMUST00000071898 Lce3bQ9CQM7 98 aa3.52□□□□□ -1.85
Cpsf1-201ENSMUST00000071898 Krtap4-9B1AQA9 244 aa3.51□□□□□ -1.85
Cpsf1-201ENSMUST00000071898 Lce1hQ9D6R3 140 aa3.49□□□□□ -1.85
Cpsf1-201ENSMUST00000071898 Fsip2A2ARZ3 6995 aa3.45□□□□□ -1.86
Cpsf1-201ENSMUST00000071898 Lce1lQ9D1G7 135 aa3.43□□□□□ -1.86
Cpsf1-201ENSMUST00000071898 Gm10100J3QK64 120 aa3.43□□□□□ -1.86
Cpsf1-201ENSMUST00000071898 Sprr2iO70560 76 aa3.42□□□□□ -1.86
Cpsf1-201ENSMUST00000071898 Syne1Q6ZWR6 8799 aa3.4□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 1424.4 ms