RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 NischQ80TM9 1593 aa18■□□□□ 0.47
Cpsf1-201ENSMUST00000071898 Rhox8Q6VSS7 320 aa17.98■□□□□ 0.47
Cpsf1-201ENSMUST00000071898 Abcc9P70170 1546 aa17.07■□□□□ 0.32
Cpsf1-201ENSMUST00000071898 Abcc8B2RUS7 1588 aa16.91■□□□□ 0.3
Cpsf1-201ENSMUST00000071898 Gm35339A0A140LHH9 1649 aa16.91■□□□□ 0.3
Cpsf1-201ENSMUST00000071898 Ccdc136Q3TVA9 1136 aa16.35■□□□□ 0.21
Cpsf1-201ENSMUST00000071898 Esf1Q3V1V3 845 aaKnown RBP16.24■□□□□ 0.19
Cpsf1-201ENSMUST00000071898 Rpgrip1Q9EPQ2 1331 aa16.07■□□□□ 0.16
Cpsf1-201ENSMUST00000071898 Trim41Q5NCC3 630 aa16.06■□□□□ 0.16
Cpsf1-201ENSMUST00000071898 Zcchc6Q5BLK4 1491 aaKnown RBP16.06■□□□□ 0.16
Cpsf1-201ENSMUST00000071898 NacadQ5SWP3 1504 aa15.99■□□□□ 0.15
Cpsf1-201ENSMUST00000071898 Cngb1E1AZ71 1325 aa15.98■□□□□ 0.15
Cpsf1-201ENSMUST00000071898 Ehmt2Q9Z148 1263 aaKnown RBP15.91■□□□□ 0.14
Cpsf1-201ENSMUST00000071898 Kdm5dQ62240 1548 aa15.75■□□□□ 0.11
Cpsf1-201ENSMUST00000071898 Rb1cc1Q9ESK9 1588 aa15.75■□□□□ 0.11
Cpsf1-201ENSMUST00000071898 ScribQ80U72 1612 aa15.65■□□□□ 0.1
Cpsf1-201ENSMUST00000071898 Ccdc180J3QNE4 1664 aa15.58■□□□□ 0.08
Cpsf1-201ENSMUST00000071898 Dcaf1Q80TR8 1506 aa15.57■□□□□ 0.08
Cpsf1-201ENSMUST00000071898 Zeb1Q64318 1117 aa15.56■□□□□ 0.08
Cpsf1-201ENSMUST00000071898 Rtl1Q7M732 1744 aa15.55■□□□□ 0.08
Cpsf1-201ENSMUST00000071898 Il27Q8K3I6 234 aa15.51■□□□□ 0.07
Cpsf1-201ENSMUST00000071898 Npm2Q80W85 207 aa15.47■□□□□ 0.07
Cpsf1-201ENSMUST00000071898 Las1lA2BE28 776 aaKnown RBP15.46■□□□□ 0.07
Cpsf1-201ENSMUST00000071898 Baz1aO88379 1555 aa15.45■□□□□ 0.06
Cpsf1-201ENSMUST00000071898 Gab3Q8BSM5 595 aa15.45■□□□□ 0.06
Cpsf1-201ENSMUST00000071898 Sycp2Q9CUU3 1500 aa15.44■□□□□ 0.06
Cpsf1-201ENSMUST00000071898 Acin1Q9JIX8 1338 aaKnown RBP15.33■□□□□ 0.05
Cpsf1-201ENSMUST00000071898 HrcG5E8J6 738 aa15.32■□□□□ 0.04
Cpsf1-201ENSMUST00000071898 Brd4Q9ESU6 1400 aaKnown RBP15.32■□□□□ 0.04
Cpsf1-201ENSMUST00000071898 Ubl4bQ9CQ84 188 aa15.29■□□□□ 0.04
Cpsf1-201ENSMUST00000071898 Npm1Q61937 292 aaKnown RBP15.28■□□□□ 0.04
Cpsf1-201ENSMUST00000071898 Myt1lP97500 1187 aa15.25■□□□□ 0.03
Cpsf1-201ENSMUST00000071898 Pds5bQ4VA53 1446 aaKnown RBP15.24■□□□□ 0.03
Cpsf1-201ENSMUST00000071898 Ercc6F8VPZ5 1481 aa15.21■□□□□ 0.03
Cpsf1-201ENSMUST00000071898 Crybg2B7ZCC2 1516 aa15.08■□□□□ 0
Cpsf1-201ENSMUST00000071898 Wdr66E9Q743 1299 aa15.05■□□□□ 0
Cpsf1-201ENSMUST00000071898 Myt1Q8CFC2 1127 aa15.03■□□□□ -0
Cpsf1-201ENSMUST00000071898 Amer1Q7TS75 1132 aa15.02□□□□□ -0.01
Cpsf1-201ENSMUST00000071898 Atad2bE9Q166 1460 aaKnown RBP14.96□□□□□ -0.02
Cpsf1-201ENSMUST00000071898 Rsf1E9PWW9 1441 aaKnown RBP14.9□□□□□ -0.02
Cpsf1-201ENSMUST00000071898 NefmP08553 848 aa14.9□□□□□ -0.02
Cpsf1-201ENSMUST00000071898 Kif15Q6P9L6 1387 aa14.9□□□□□ -0.02
Cpsf1-201ENSMUST00000071898 CenpbP27790 599 aa14.86□□□□□ -0.03
Cpsf1-201ENSMUST00000071898 UbtfP25976 765 aaKnown RBP14.85□□□□□ -0.03
Cpsf1-201ENSMUST00000071898 DiexfQ8BTT6 772 aaKnown RBP14.85□□□□□ -0.03
Cpsf1-201ENSMUST00000071898 Cecr2E9Q2Z1 1453 aa14.84□□□□□ -0.03
Cpsf1-201ENSMUST00000071898 Smarca4Q3TKT4 1613 aaKnown RBP14.79□□□□□ -0.04
Cpsf1-201ENSMUST00000071898 Phldb1Q6PDH0 1371 aaKnown RBP14.78□□□□□ -0.04
Cpsf1-201ENSMUST00000071898 Smarca2Q6DIC0 1577 aa14.77□□□□□ -0.04
Cpsf1-201ENSMUST00000071898 Pcgf6Q99NA9 353 aa14.76□□□□□ -0.05
Cpsf1-201ENSMUST00000071898 Ube2uB1AUC4 352 aa14.76□□□□□ -0.05
Cpsf1-201ENSMUST00000071898 BicraF8VPZ9 1578 aa14.74□□□□□ -0.05
Cpsf1-201ENSMUST00000071898 Golga3P55937 1487 aa14.73□□□□□ -0.05
Cpsf1-201ENSMUST00000071898 CftrP26361 1476 aa14.7□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Chic1Q8CBW7 227 aa14.7□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Ap3b1Q9Z1T1 1105 aa14.68□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Cep164Q5DU05 1446 aa14.67□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Ccdc18Q640L5 1455 aa14.67□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Pelp1Q9DBD5 1123 aaKnown RBP14.67□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Iqgap2Q3UQ44 1575 aa14.66□□□□□ -0.06
Cpsf1-201ENSMUST00000071898 Synj1Q8CHC4 1574 aa14.57□□□□□ -0.08
Cpsf1-201ENSMUST00000071898 Cux2P70298 1426 aa14.56□□□□□ -0.08
Cpsf1-201ENSMUST00000071898 Ifnlr1Q8CGK5 535 aa14.56□□□□□ -0.08
Cpsf1-201ENSMUST00000071898 Supt5hO55201 1082 aaKnown RBP14.54□□□□□ -0.08
Cpsf1-201ENSMUST00000071898 Cttnbp2B9EJA2 1648 aa14.51□□□□□ -0.09
Cpsf1-201ENSMUST00000071898 Dnajc5bQ9CQ94 199 aa14.5□□□□□ -0.09
Cpsf1-201ENSMUST00000071898 Mier1Q5UAK0 511 aa14.5□□□□□ -0.09
Cpsf1-201ENSMUST00000071898 Fkbp15Q6P9Q6 1216 aaKnown RBP14.49□□□□□ -0.09
Cpsf1-201ENSMUST00000071898 Ttbk1Q6PCN3 1308 aa14.48□□□□□ -0.09
Cpsf1-201ENSMUST00000071898 Lmod2Q3UHZ5 550 aa14.41□□□□□ -0.1
Cpsf1-201ENSMUST00000071898 Fmn1Q05860 1466 aa14.41□□□□□ -0.1
Cpsf1-201ENSMUST00000071898 Frmpd1A2AKB4 1549 aa14.4□□□□□ -0.1
Cpsf1-201ENSMUST00000071898 Cdk11bP24788 784 aaKnown RBP14.37□□□□□ -0.11
Cpsf1-201ENSMUST00000071898 Cc2d2aQ8CFW7 1633 aa14.32□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Fam50aQ9WV03 339 aaKnown RBP14.32□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Ppargc1bQ8VHJ7 1014 aa14.31□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Wdr62Q3U3T8 1523 aa14.3□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Arhgap27A2AB59 869 aa14.3□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 TonslQ6NZL6 1363 aa14.29□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Mrc2Q64449 1479 aa14.29□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 LrpprcQ6PB66 1392 aaKnown RBP14.29□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Nop58Q6DFW4 536 aaKnown RBP14.28□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Plekhg3Q4VAC9 1341 aa14.28□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Ccdc88bQ4QRL3 1481 aa14.28□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Dhx29Q6PGC1 1365 aaKnown RBP14.27□□□□□ -0.12
Cpsf1-201ENSMUST00000071898 Clip1Q922J3 1391 aa14.27□□□□□ -0.13
Cpsf1-201ENSMUST00000071898 Stra8P70278 393 aa14.25□□□□□ -0.13
Cpsf1-201ENSMUST00000071898 Plppr3Q7TPB0 716 aa14.19□□□□□ -0.14
Cpsf1-201ENSMUST00000071898 NclP09405 707 aaKnown RBP14.18□□□□□ -0.14
Cpsf1-201ENSMUST00000071898 Slc24a1Q91WD8 1130 aa14.17□□□□□ -0.14
Cpsf1-201ENSMUST00000071898 Setd5Q5XJV7 1441 aa14.16□□□□□ -0.14
Cpsf1-201ENSMUST00000071898 AknaQ80VW7 1404 aa14.15□□□□□ -0.14
Cpsf1-201ENSMUST00000071898 Zbtb7cQ8VCZ7 619 aa14.12□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 ClspnQ80YR7 1315 aa14.11□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Pabpn1Q8CCS6 302 aaKnown RBP14.11□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Baz1bQ9Z277 1479 aa14.1□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Sall2Q9QX96 1004 aa14.09□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Neurod1Q60867 357 aa14.09□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Urb2E9Q7L1 1524 aaKnown RBP14.09□□□□□ -0.15
Cpsf1-201ENSMUST00000071898 Hnrnpul2Q00PI9 745 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms