RNA–Protein interactions for RNA: ENSMUST00000069174.5

Trim23-202, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 4,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-202ENSMUST00000069174 Gm10267M0QWD8 85 aa2.85□□□□□ -1.95
Trim23-202ENSMUST00000069174 Birc6O88738 4882 aa2.85□□□□□ -1.95
Trim23-202ENSMUST00000069174 Gm18596A0A1W2P860 280 aa2.85□□□□□ -1.95
Trim23-202ENSMUST00000069174 Hectd4E9Q2E4 4418 aa2.85□□□□□ -1.95
Trim23-202ENSMUST00000069174 Gm2310J3QNJ2 377 aa2.85□□□□□ -1.95
Trim23-202ENSMUST00000069174 Kmt2cQ8BRH4 4903 aa2.84□□□□□ -1.95
Trim23-202ENSMUST00000069174 Lrp1bQ9JI18 4599 aa2.84□□□□□ -1.95
Trim23-202ENSMUST00000069174 Vps13bQ80TY5 3993 aa2.84□□□□□ -1.96
Trim23-202ENSMUST00000069174 Fat3Q8BNA6 4555 aa2.82□□□□□ -1.96
Trim23-202ENSMUST00000069174 Lrp1Q91ZX7 4545 aaKnown RBP2.81□□□□□ -1.96
Trim23-202ENSMUST00000069174 Pkhd1l1Q80ZA4 4249 aa2.8□□□□□ -1.96
Trim23-202ENSMUST00000069174 Abca13Q5SSE9 5034 aa2.8□□□□□ -1.96
Trim23-202ENSMUST00000069174 Dnhd1D3Z2X2 4750 aa2.79□□□□□ -1.96
Trim23-202ENSMUST00000069174 Fat2Q5F226 4351 aa2.79□□□□□ -1.96
Trim23-202ENSMUST00000069174 Mycbp2Q7TPH6 4711 aa2.78□□□□□ -1.96
Trim23-202ENSMUST00000069174 HydinQ80W93 5154 aa2.76□□□□□ -1.97
Trim23-202ENSMUST00000069174 Uqcr11Q9CPX8 56 aa2.76□□□□□ -1.97
Trim23-202ENSMUST00000069174 Gm3880A0A1B0GSB3 72 aa2.75□□□□□ -1.97
Trim23-202ENSMUST00000069174 Rpl37Q9D823 97 aa2.75□□□□□ -1.97
Trim23-202ENSMUST00000069174 Krtap31-1Q9D644 177 aa2.75□□□□□ -1.97
Trim23-202ENSMUST00000069174 Lrp2A2ARV4 4660 aa2.73□□□□□ -1.97
Trim23-202ENSMUST00000069174 PcloQ9QYX7 5068 aa2.73□□□□□ -1.97
Trim23-202ENSMUST00000069174 Gm10999F6Q4M4 69 aa2.73□□□□□ -1.97
Trim23-202ENSMUST00000069174 Gm4491E0CX42 125 aa2.71□□□□□ -1.97
Trim23-202ENSMUST00000069174 Fam229aB2KGE5 128 aa2.71□□□□□ -1.98
Trim23-202ENSMUST00000069174 Gm19668J3QMD1 248 aa2.7□□□□□ -1.98
Trim23-202ENSMUST00000069174 Gm21798J3QNU5 87 aa2.7□□□□□ -1.98
Trim23-202ENSMUST00000069174 2210017I01RikA0A0A6YVV1 95 aa2.68□□□□□ -1.98
Trim23-202ENSMUST00000069174 Prm1P02319 51 aa2.68□□□□□ -1.98
Trim23-202ENSMUST00000069174 4930507D05RikQ8C9C9 103 aa2.68□□□□□ -1.98
Trim23-202ENSMUST00000069174 Herc1E9PZP8 4859 aa2.68□□□□□ -1.98
Trim23-202ENSMUST00000069174 A0A286YCP9 139 aa2.67□□□□□ -1.98
Trim23-202ENSMUST00000069174 Gm20537G3UYK7 97 aa2.67□□□□□ -1.98
Trim23-202ENSMUST00000069174 Gm19402J3QJV4 266 aa2.66□□□□□ -1.98
Trim23-202ENSMUST00000069174 Gm7735D3YX18 52 aa2.65□□□□□ -1.98
Trim23-202ENSMUST00000069174 Crct1Q6PAI5 102 aa2.64□□□□□ -1.99
Trim23-202ENSMUST00000069174 Krtap31-2Q8CAY5 177 aa2.64□□□□□ -1.99
Trim23-202ENSMUST00000069174 B930094E09RikQ8C4T2 136 aa2.63□□□□□ -1.99
Trim23-202ENSMUST00000069174 Gm9789Q8BIG3 52 aa2.63□□□□□ -1.99
Trim23-202ENSMUST00000069174 Defb1P56386 69 aa2.62□□□□□ -1.99
Trim23-202ENSMUST00000069174 Gm17606F6ZL36 78 aa2.61□□□□□ -1.99
Trim23-202ENSMUST00000069174 Gm10318A0A1W2P728 225 aa2.58□□□□□ -2
Trim23-202ENSMUST00000069174 Gm17416Q30KP4 66 aa2.58□□□□□ -2
Trim23-202ENSMUST00000069174 Ush2AQ2QI47 5193 aa2.57□□□□□ -2
Trim23-202ENSMUST00000069174 Lce1dQ9D731 133 aa2.57□□□□□ -2
Trim23-202ENSMUST00000069174 4932415D10RikA0A1W2P6U8 4986 aa2.56□□□□□ -2
Trim23-202ENSMUST00000069174 LorP18165 486 aa2.54□□□□□ -2
Trim23-202ENSMUST00000069174 Krtap7-1Q9D3I6 87 aa2.54□□□□□ -2
Trim23-202ENSMUST00000069174 Ubr4A2AN08 5180 aa2.52□□□□□ -2.01
Trim23-202ENSMUST00000069174 Gm19426M0QWC7 77 aa2.51□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap1-3A2A588 173 aa2.51□□□□□ -2.01
Trim23-202ENSMUST00000069174 Gm10382Q3V0T5 144 aa2.51□□□□□ -2.01
Trim23-202ENSMUST00000069174 Camk2n1Q6QWF9 78 aa2.51□□□□□ -2.01
Trim23-202ENSMUST00000069174 Hmcn2A2AJ76 5100 aa2.5□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap3-1A2A591 98 aa2.5□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap13-1Q8K198 168 aa2.49□□□□□ -2.01
Trim23-202ENSMUST00000069174 2310079G19RikQ9D6L6 185 aa2.49□□□□□ -2.01
Trim23-202ENSMUST00000069174 Cox6b2Q80ZN9 88 aa2.48□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap16-3Q8C1I6 86 aa2.48□□□□□ -2.01
Trim23-202ENSMUST00000069174 Spink7Q6IE32 76 aa2.47□□□□□ -2.01
Trim23-202ENSMUST00000069174 Gm38119A0A0A6YX29 146 aa2.47□□□□□ -2.01
Trim23-202ENSMUST00000069174 BC029722A0A0N4SW31 51 aa2.47□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap19-3Q925H6 87 aa2.47□□□□□ -2.01
Trim23-202ENSMUST00000069174 Krtap19-1Q925H2 87 aa2.45□□□□□ -2.02
Trim23-202ENSMUST00000069174 ZanO88799 5376 aa2.45□□□□□ -2.02
Trim23-202ENSMUST00000069174 Krtap1-5A2A590 122 aa2.41□□□□□ -2.02
Trim23-202ENSMUST00000069174 Fat4Q2PZL6 4981 aa2.4□□□□□ -2.03
Trim23-202ENSMUST00000069174 Gm9955Q8CEJ8 102 aa2.39□□□□□ -2.03
Trim23-202ENSMUST00000069174 Krtap1-4Q3V2D6 188 aa2.38□□□□□ -2.03
Trim23-202ENSMUST00000069174 Gm10061D3Z714 54 aa2.37□□□□□ -2.03
Trim23-202ENSMUST00000069174 Rnf213E9Q555 5152 aaKnown RBP2.33□□□□□ -2.04
Trim23-202ENSMUST00000069174 Lce1a1Q9CQH5 143 aa2.33□□□□□ -2.04
Trim23-202ENSMUST00000069174 Lce1gQ9D195 139 aa2.33□□□□□ -2.04
Trim23-202ENSMUST00000069174 Gm11569B1AQB1 180 aa2.31□□□□□ -2.04
Trim23-202ENSMUST00000069174 Krtap12-1Q9Z287 130 aa2.28□□□□□ -2.04
Trim23-202ENSMUST00000069174 Krtap19-9aF8WH65 55 aa2.27□□□□□ -2.05
Trim23-202ENSMUST00000069174 Krtap9-5A2A5X3 358 aa2.26□□□□□ -2.05
Trim23-202ENSMUST00000069174 Lce1lQ9D1G7 135 aa2.25□□□□□ -2.05
Trim23-202ENSMUST00000069174 Gm40193A0A1B0GT39 78 aa2.23□□□□□ -2.05
Trim23-202ENSMUST00000069174 Krtap19-2Q925I0 141 aa2.23□□□□□ -2.05
Trim23-202ENSMUST00000069174 SspoQ8CG65 4998 aa2.22□□□□□ -2.05
Trim23-202ENSMUST00000069174 Lce1jD3YUU5 139 aa2.21□□□□□ -2.06
Trim23-202ENSMUST00000069174 Gm17402F6Z0L5 76 aa2.21□□□□□ -2.06
Trim23-202ENSMUST00000069174 Krtap17-1A2A5X6 109 aa2.2□□□□□ -2.06
Trim23-202ENSMUST00000069174 Gm11562A0PK51 136 aa2.2□□□□□ -2.06
Trim23-202ENSMUST00000069174 Mdn1A2ANY6 5589 aaKnown RBP2.16□□□□□ -2.06
Trim23-202ENSMUST00000069174 Sprr2a3Q4KL71 83 aa2.15□□□□□ -2.06
Trim23-202ENSMUST00000069174 Sprr2a1Q9CQK8 83 aa2.15□□□□□ -2.06
Trim23-202ENSMUST00000069174 Krtap4-6Q3V4B7 195 aa2.14□□□□□ -2.07
Trim23-202ENSMUST00000069174 Muc5bE9Q5I3 4800 aa2.13□□□□□ -2.07
Trim23-202ENSMUST00000069174 Gm11596B1AQB0 205 aa2.13□□□□□ -2.07
Trim23-202ENSMUST00000069174 Krtap8-1O08633 61 aa2.12□□□□□ -2.07
Trim23-202ENSMUST00000069174 Gm6358A0A087WPH4 74 aa2.12□□□□□ -2.07
Trim23-202ENSMUST00000069174 Syne2Q6ZWQ0 6874 aaKnown RBP2.12□□□□□ -2.07
Trim23-202ENSMUST00000069174 Mt2P02798 61 aa2.08□□□□□ -2.08
Trim23-202ENSMUST00000069174 Lce1iQ9D6P5 149 aa2.06□□□□□ -2.08
Trim23-202ENSMUST00000069174 Lce1hQ9D6R3 140 aa2.06□□□□□ -2.08
Trim23-202ENSMUST00000069174 Gm11564A2A4L9 201 aa2.04□□□□□ -2.08
Trim23-202ENSMUST00000069174 Gm11595B1AQA7 289 aa2.04□□□□□ -2.08
Trim23-202ENSMUST00000069174 Krtap4-8B1AQA8 209 aa2.04□□□□□ -2.08
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms